Table 31A. Trachea


Gene          Accession     PNSEQIDNO        ProteinID     AASEQIDNO        Description                                                                                               
AGR2          NM_006408     SEQ ID NO:31847  NP_006399     SEQ ID NO:31889  anterior gradient 2 homolog [Homo sapiens]                                                                
AK7*          NM_152327     SEQ ID NO:8150   NP_689540     SEQ ID NO:9478   adenylate kinase 7 [Homo sapiens]                                                                         
ALDH1L1*      NM_012190     SEQ ID NO:23281  NP_036322     SEQ ID NO:23612  aldehyde dehydrogenase 1 family, member L1 [Homo sapiens]                                                 
APIN          NM_017855     SEQ ID NO:31848  NP_060325     SEQ ID NO:31890  APin protein [Homo sapiens]                                                                               
APP*          NM_000484     SEQ ID NO:17510  NP_000475     SEQ ID NO:17979  amyloid beta A4 protein precursor, isoform a [Homo sapiens]                                               
APP*          NM_201413     SEQ ID NO:17511  NP_958816     SEQ ID NO:17980  amyloid beta A4 protein precursor, isoform b [Homo sapiens]                                               
APP*          NM_201414     SEQ ID NO:17512  NP_958817     SEQ ID NO:17981  amyloid beta A4 protein precursor, isoform c [Homo sapiens]                                               
C10orf81*     NM_024889     SEQ ID NO:35     NP_079165     SEQ ID NO:403    hypothetical protein LOC79949 [Homo sapiens]                                                              
C10orf81*     NM_024889     SEQ ID NO:35     NP_079165     SEQ ID NO:403    hypothetical protein LOC79949 [Homo sapiens]                                                              
C20orf114*    NM_033197     SEQ ID NO:31849  NP_149974     SEQ ID NO:31891  LPLUNC1 protein precursor [Homo sapiens]                                                                  
CACNA2D1*     NM_000722     SEQ ID NO:2669   NP_000713     SEQ ID NO:3025   calcium channel, voltage-dependent, alpha 2/delta subunit 1 [Homo sapiens]                                
CBFA2T2*      NM_005093     SEQ ID NO:31850  NP_005084     SEQ ID NO:31892  myeloid translocation gene-related protein 1 isoform MTGR1b [Homo sapiens]                                
CBFA2T2*      NM_175864     SEQ ID NO:31851  NP_787060     SEQ ID NO:31893  myeloid translocation gene-related protein 1 isoform MTGR1a [Homo sapiens]                                
CCNG1         NM_004060     SEQ ID NO:31852  NP_004051     SEQ ID NO:31894  cyclin G1 [Homo sapiens]                                                                                  
CCNG1         NM_199246     SEQ ID NO:31853  NP_954854     SEQ ID NO:31895  cyclin G1 [Homo sapiens]                                                                                  
CD55*         NM_000574     SEQ ID NO:8274   NP_000565     SEQ ID NO:9602   decay accelerating factor for complement [Homo sapiens]                                                   
CEACAM5*      NM_004363     SEQ ID NO:31854  NP_004354     SEQ ID NO:31896  carcinoembryonic antigen-related cell adhesion molecule 5 [Homo sapiens]                                  
DDEF1*        NM_018482     SEQ ID NO:7283   NP_060952     SEQ ID NO:7613   development and differentiation enhancing factor 1 [Homo sapiens]                                         
DLC1*         NM_006094     SEQ ID NO:31855  NP_006085     SEQ ID NO:31897  deleted in liver cancer 1 isoform 2 [Homo sapiens]                                                        
DLC1*         NM_182643     SEQ ID NO:31856  NP_872584     SEQ ID NO:31898  deleted in liver cancer 1 isoform 1 [Homo sapiens]                                                        
DLG4*         NM_001365     SEQ ID NO:31857  NP_001356     SEQ ID NO:31899  postsynaptic density protein 95 [Homo sapiens]                                                            
DNHD2*        NM_178504     SEQ ID NO:31858  NP_848599     SEQ ID NO:31900  hypothetical protein LOC201625 [Homo sapiens]                                                             
ERN2*         NM_033266     SEQ ID NO:8467   NP_150296     SEQ ID NO:9795   endoplasmic reticulum to nucleus signalling 2 [Homo sapiens]                                              
FAM92B*       NM_198491     SEQ ID NO:31859  NP_940893     SEQ ID NO:31901  hypothetical protein LOC339145 [Homo sapiens]                                                             
FAT*          NM_005245     SEQ ID NO:2715   NP_005236     SEQ ID NO:3071   FAT tumor suppressor 1 precursor [Homo sapiens]                                                           
FUT3*         NM_000149     SEQ ID NO:31860  NP_000140     SEQ ID NO:31902  fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group included) [Homo sapiens]   
GLYATL2*      NM_145016     SEQ ID NO:31861  NP_659453     SEQ ID NO:31903  hypothetical protein LOC219970 [Homo sapiens]                                                             
HMGB4*        NM_001008728  SEQ ID NO:27805  NP_001008728  SEQ ID NO:28807  HMG2 like isoform 2 [Homo sapiens]                                                                        
HMGB4*        NM_145205     SEQ ID NO:27806  NP_660206     SEQ ID NO:28808  HMG2 like isoform 1 [Homo sapiens]                                                                        
HSUP1         XM_929750     SEQ ID NO:31862  XP_934843     SEQ ID NO:31904  PREDICTED: hypothetical protein LOC441951 isoform 1 [Homo sapiens]                                        
HSUP1         XM_933944     SEQ ID NO:31863  XP_939037     SEQ ID NO:31905  PREDICTED: hypothetical protein LOC441951 isoform 2 [Homo sapiens]                                        
HSUP1         XM_933945     SEQ ID NO:31864  XP_939038     SEQ ID NO:31906  PREDICTED: hypothetical protein LOC441951 isoform 3 [Homo sapiens]                                        
HSUP1         XM_941620     SEQ ID NO:31865  XP_946713     SEQ ID NO:31907  PREDICTED: hypothetical protein LOC441951 isoform 4 [Homo sapiens]                                        
HSUP1         XM_945309     SEQ ID NO:31866  XP_950402     SEQ ID NO:31908  PREDICTED: hypothetical protein LOC441951 isoform 5 [Homo sapiens]                                        
HSUP1         XM_945311     SEQ ID NO:31867  XP_950404     SEQ ID NO:31909  PREDICTED: hypothetical protein LOC441951 isoform 6 [Homo sapiens]                                        
KRT7*         NM_005556     SEQ ID NO:16061  NP_005547     SEQ ID NO:16458  keratin 7 [Homo sapiens]                                                                                  
LDLRAD1*      NM_001010978  SEQ ID NO:31868  NP_001010978  SEQ ID NO:31910  low density lipoprotein receptor A domain containing 1 [Homo sapiens]                                     
LOC132203*    XM_059578     SEQ ID NO:31869  XP_059578     SEQ ID NO:31911  PREDICTED: hypothetical protein XP_059578 isoform 1 [Homo sapiens]                                        
LOC132203*    XM_059578     SEQ ID NO:31869  XP_059578     SEQ ID NO:31911  PREDICTED: hypothetical protein XP_059578 isoform 1 [Homo sapiens]                                        
LOC132203*    XM_059578     SEQ ID NO:31869  XP_059578     SEQ ID NO:31911  PREDICTED: hypothetical protein XP_059578 isoform 1 [Homo sapiens]                                        
LOC132203*    XM_059578     SEQ ID NO:31869  XP_059578     SEQ ID NO:31911  PREDICTED: hypothetical protein XP_059578 isoform 1 [Homo sapiens]                                        
LOC132203*    XM_930543     SEQ ID NO:31870  XP_935636     SEQ ID NO:31912  PREDICTED: similar to S-100 protein, alpha chain isoform 2 [Homo sapiens]                                 
LOC389429*    NM_001010905  SEQ ID NO:31871  NP_001010905  SEQ ID NO:31913  hypothetical protein LOC389429 [Homo sapiens]                                                             
LOC400891     NM_001013675  SEQ ID NO:31872  NP_001013697  SEQ ID NO:31914  hypothetical protein LOC400891 [Homo sapiens]                                                             
LOC442423     XM_498329     SEQ ID NO:31873  XP_498329     SEQ ID NO:31915  PREDICTED: similar to Ig kappa chain V-I region HK101 precursor [Homo sapiens]                            
LOC644280     XM_497769     SEQ ID NO:31874  XP_497769     SEQ ID NO:31916  PREDICTED: hypothetical protein XP_497769 [Homo sapiens]                                                  
LOC651293*    XM_942673     SEQ ID NO:31875  XP_947766     SEQ ID NO:31917  PREDICTED: similar to S-100 protein, alpha chain isoform 1 [Homo sapiens]                                 
LOC651293*    XM_946212     SEQ ID NO:31876  XP_951305     SEQ ID NO:31918  PREDICTED: hypothetical protein XP_951305 isoform 3 [Homo sapiens]                                        
LPO*          NM_006151     SEQ ID NO:31877  NP_006142     SEQ ID NO:31919  lactoperoxidase [Homo sapiens]                                                                            
LTF*          NM_002343     SEQ ID NO:1970   NP_002334     SEQ ID NO:2269   lactotransferrin [Homo sapiens]                                                                           
LYZ           NM_000239     SEQ ID NO:1972   NP_000230     SEQ ID NO:2271   lysozyme precursor [Homo sapiens]                                                                         
LYZ           NM_000239     SEQ ID NO:1972   NP_000230     SEQ ID NO:2271   lysozyme precursor [Homo sapiens]                                                                         
MIPOL1*       NM_138731     SEQ ID NO:8894   NP_620059     SEQ ID NO:10222  mirror-image polydactyly 1 [Homo sapiens]                                                                 
MNAB*         NM_018835     SEQ ID NO:16109  NP_061323     SEQ ID NO:16506  membrane associated DNA binding protein [Homo sapiens]                                                    
MUC16*        NM_024690     SEQ ID NO:31878  NP_078966     SEQ ID NO:31920  mucin 16 [Homo sapiens]                                                                                   
MUC4*         NM_004532     SEQ ID NO:21792  NP_004523     SEQ ID NO:22379  mucin 4 isoform d [Homo sapiens]                                                                          
MUC4*         NM_018406     SEQ ID NO:21793  NP_060876     SEQ ID NO:22380  mucin 4 isoform a [Homo sapiens]                                                                          
MUC4*         NM_138297     SEQ ID NO:21794  NP_612154     SEQ ID NO:22381  mucin 4 isoform e [Homo sapiens]                                                                          
MUC4*         NM_138298     SEQ ID NO:21795  NP_612155     SEQ ID NO:22382  mucin 4 isoform b [Homo sapiens]                                                                          
MUC4*         NM_138299     SEQ ID NO:21796  NP_612156     SEQ ID NO:22383  mucin 4 isoform c [Homo sapiens]                                                                          
NF1*          NM_000267     SEQ ID NO:3926   NP_000258     SEQ ID NO:4475   neurofibromin [Homo sapiens]                                                                              
NFE2L3*       NM_004289     SEQ ID NO:7405   NP_004280     SEQ ID NO:7735   nuclear factor (erythroid-derived 2)-like 3 [Homo sapiens]                                                
OMG*          NM_002544     SEQ ID NO:3938   NP_002535     SEQ ID NO:4487   oligodendrocyte myelin glycoprotein [Homo sapiens]                                                        
OSMR*         NM_003999     SEQ ID NO:21831  NP_003990     SEQ ID NO:22418  oncostatin M receptor [Homo sapiens]                                                                      
PIP5K2A*      NM_005028     SEQ ID NO:24411  NP_005019     SEQ ID NO:24541  phosphatidylinositol-4-phosphate 5-kinase type II alpha [Homo sapiens]                                    
PLK1*         NM_005030     SEQ ID NO:9033   NP_005021     SEQ ID NO:10361  polo-like kinase [Homo sapiens]                                                                           
PLUNC         NM_016583     SEQ ID NO:31879  NP_057667     SEQ ID NO:31921  palate, lung and nasal epithelium carcinoma associated protein precursor [Homo sapiens]                   
PLUNC         NM_130852     SEQ ID NO:31880  NP_570913     SEQ ID NO:31922  palate, lung and nasal epithelium carcinoma associated protein precursor [Homo sapiens]                   
PPP1R15B*     NM_032833     SEQ ID NO:26137  NP_116222     SEQ ID NO:26607  protein phosphatase 1, regulatory subunit 15B [Homo sapiens]                                              
PROL1*        NM_021225     SEQ ID NO:31881  NP_067048     SEQ ID NO:31923  basic proline-rich protein [Homo sapiens]                                                                 
PRR4          NM_007244     SEQ ID NO:31882  NP_009175     SEQ ID NO:31924  proline rich 4 (lacrimal) [Homo sapiens]                                                                  
PRR4          NM_007244     SEQ ID NO:31882  NP_009175     SEQ ID NO:31924  proline rich 4 (lacrimal) [Homo sapiens]                                                                  
PRR4          NM_007244     SEQ ID NO:31882  NP_009175     SEQ ID NO:31924  proline rich 4 (lacrimal) [Homo sapiens]                                                                  
PRR4          NM_007244     SEQ ID NO:31882  NP_009175     SEQ ID NO:31924  proline rich 4 (lacrimal) [Homo sapiens]                                                                  
PRR4          NM_007244     SEQ ID NO:31882  NP_009175     SEQ ID NO:31924  proline rich 4 (lacrimal) [Homo sapiens]                                                                  
PRR4          NM_007244     SEQ ID NO:31882  NP_009175     SEQ ID NO:31924  proline rich 4 (lacrimal) [Homo sapiens]                                                                  
PRR4          NM_007244     SEQ ID NO:31882  NP_009175     SEQ ID NO:31924  proline rich 4 (lacrimal) [Homo sapiens]                                                                  
PTPRC*        NM_002838     SEQ ID NO:19214  NP_002829     SEQ ID NO:19618  protein tyrosine phosphatase, receptor type, C isoform 1 precursor [Homo sapiens]                         
PTPRC*        NM_080921     SEQ ID NO:19215  NP_563578     SEQ ID NO:19619  protein tyrosine phosphatase, receptor type, C isoform 2 precursor [Homo sapiens]                         
PTPRC*        NM_080922     SEQ ID NO:19216  NP_563579     SEQ ID NO:19620  protein tyrosine phosphatase, receptor type, C isoform 3 precursor [Homo sapiens]                         
RBM20*        XM_291671     SEQ ID NO:14353  XP_291671     SEQ ID NO:14767  PREDICTED: similar to Matrin-3 [Homo sapiens]                                                             
RBM20*        XM_939337     SEQ ID NO:14354  XP_944430     SEQ ID NO:14768  PREDICTED: similar to Matrin-3 [Homo sapiens]                                                             
RP11-54H7.1*  NM_015011     SEQ ID NO:9147   NP_055826     SEQ ID NO:10475  myosin heavy chain Myr 8 [Homo sapiens]                                                                   
SDK1*         NM_152744     SEQ ID NO:31883  NP_689957     SEQ ID NO:31925  sidekick homolog 1 [Homo sapiens]                                                                         
SERPINB3*     NM_006919     SEQ ID NO:31884  NP_008850     SEQ ID NO:31926  serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 3 [Homo sapiens]                   
SERPINB3*     NM_006919     SEQ ID NO:31884  NP_008850     SEQ ID NO:31926  serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 3 [Homo sapiens]                   
SHRM*         NM_020859     SEQ ID NO:31885  NP_065910     SEQ ID NO:31927  shroom [Homo sapiens]                                                                                     
SLC12A2*      NM_001046     SEQ ID NO:31886  NP_001037     SEQ ID NO:31928  solute carrier family 12 (sodium/potassium/chloride transporters), member 2 [Homo sapiens]                
SLC12A2*      NM_001046     SEQ ID NO:31886  NP_001037     SEQ ID NO:31928  solute carrier family 12 (sodium/potassium/chloride transporters), member 2 [Homo sapiens]                
SLPI          NM_003064     SEQ ID NO:24893  NP_003055     SEQ ID NO:25096  secretory leukocyte peptidase inhibitor precursor [Homo sapiens]                                          
SMR3A         NM_012390     SEQ ID NO:24430  NP_036522     SEQ ID NO:24560  submaxillary gland androgen regulated protein 3 homolog A precursor [Homo sapiens]                        
SRGAP3*       NM_001033116  SEQ ID NO:5784   NP_001028288  SEQ ID NO:6618   SLIT-ROBO Rho GTPase activating protein 3 isoform c [Homo sapiens]                                        
SRGAP3*       NM_001033117  SEQ ID NO:5785   NP_001028289  SEQ ID NO:6619   SLIT-ROBO Rho GTPase activating protein 3 isoform b [Homo sapiens]                                        
SRGAP3*       NM_014850     SEQ ID NO:5786   NP_055665     SEQ ID NO:6620   SLIT-ROBO Rho GTPase activating protein 3 isoform a [Homo sapiens]                                        
STAG1*        NM_005862     SEQ ID NO:4056   NP_005853     SEQ ID NO:4605   stromal antigen 1 [Homo sapiens]                                                                          
TECTA*        NM_005422     SEQ ID NO:12139  NP_005413     SEQ ID NO:12395  tectorin alpha precursor [Homo sapiens]                                                                   
TMPRSS11D*    NM_004262     SEQ ID NO:31887  NP_004253     SEQ ID NO:31929  transmembrane protease, serine 11D [Homo sapiens]                                                         
UNQ473        NM_198477     SEQ ID NO:31888  NP_940879     SEQ ID NO:31930  DMC [Homo sapiens]                                                                                        
WBP4          NM_007187     SEQ ID NO:20833  NP_009118     SEQ ID NO:21100  WW domain-containing binding protein 4 [Homo sapiens]                                                     


*Denotes predicted glycoprotein	
