Table 5.1. Genome wide association study results in the Quebec Founder Population (QFP). SNP
markers found to be associated with schizophrenia from the analysis of genome wide scan (GWS) data:
CIAS1-1_cr1_not_w1. Columns include: Region ID; Chromosome; Build 36 location in base pairs (bp);
rs#, dbSNP data base (NCBI) reference number; Sequence ID, unique numerical identifier for this
patent application; Sequence, 21 bp of sequence covering 10 base pair of unique sequence flanking
either side of central polymorphic SNP; - log10 P values for GWS, - log10 of the P value for
statistical significance from the GWS for single SNP markers (both T test and Permutation test
p-values are displayed; see Example section) and for the most highly associated multi-marker
haplotypes centered at the reference marker and defined by the sliding windows of specified sizes.

                                                                             ldstatv2        
Region ID   Chr   B36 Position   RS#        Seq ID   Flanking Sequence       Single Marker   
382         13    29033331       478085     17049    ACACTAATGAMGGCAGCACAC   0.029           
382         13    29038981       6490411    17050    CCCACTAACCRTGACAGGCAG   0.236           
382         13    29054317       280936     17051    GCTGCTTGCCRCTCGGCTAAT   0.130           
382         13    29061015       9551699    17052    GGAGAAGGGCRAAAGGGATGA   0.886           
382         13    29062630       7981502    17053    GTCACTGAGCRCAAGGTGCAT   0.808           
382         13    29070495       9551705    17054    CTTCTCAGCARAAAGGATTCA   0.312           
382         13    29074650       9579422    17055    AGGAACATTCYACCCATGTCA   5.157           
382         13    29080114       1553952    17056    ACCTGATCCCRACCAGCAGGG   6.150           
382         13    29085286       17073762   17057    GCTCTCATTCYCTCACTTAAC   0.113           
382         13    29092288       280942     17058    CTTCCCATTCYTCTTTCTAAA   1.169           
382         13    29097641       9579431    17059    CCTACAGGAGYGTTCAGGCCA   0.081           
382         13    29124924       489679     17060    TATTATCCACRTAGTGTCCTT   1.168           
383         16    83715115       1110289    18057    GAGTGTGAGCRAGGAAAGTGG   0.369           
383         16    83722102       2062550    18058    TTGCCTCTCTYCTCGGGTGGG   0.319           
383         16    83727618       3751757    18059    TTGTTTAACCYCCTTCCTGCG   0.206           
383         16    83732810       1875250    18060    AGGCAGATGCRGCGGCCAAGA   6.558           
383         16    83733564       2937134    18061    CAGCTGGCAGRAATGACATGG   0.434           
383         16    83734490       16975301   18062    AGCTTTAACCRCTGCATGCAG   0.480           
383         16    83735148       9925768    18063    AGGGAGTGCCRTGCGGGGCAG   0.242           
383         16    83735330       868353     18064    TCCTGGGCCAYGGGAAACAGC   0.286           
