                         SEQUENCE LISTING

<110>  Battelle Memorial Institute, Pacific Northwest Division
 
<120>  SOLUTION FRAGMENTATION SYSTEM AND PROCESS FOR PROTEOMICS ANALYSIS

<130>  E-15260

<150>  60/911,400
<151>  2007-04-12

<160>  53    

<170>  PatentIn version 3.3

<210>  1
<211>  21
<212>  PRT
<213>  Homo sapiens

<400>  1

Cys Glu Glu Met Glu Glu Gly Tyr Thr Gln Cys Ser Gln Phe Leu Tyr 
1               5                   10                  15      


Gly Val Gln Glu Lys 
            20      


<210>  2
<211>  26
<212>  PRT
<213>  Homo sapiens

<400>  2

Met Val Thr Ser Leu Ala Cys Gly Asn Gly Val Cys Gly Cys Ser Pro 
1               5                   10                  15      


Gly Gly Asp Thr Asp Thr Gln Glu Ala Lys 
            20                  25      


<210>  3
<211>  24
<212>  PRT
<213>  Homo sapiens

<400>  3

Lys Gly Ala Asp His Ser Ser Ala Pro Pro Ala Asp Gly Asp Asp Glu 
1               5                   10                  15      


Glu Met Met Pro Gly His His Leu 
            20                  


<210>  4
<211>  23
<212>  PRT
<213>  Homo sapiens

<400>  4

Val Thr Pro Gln Glu Glu Ala Asp Ser Asp Val Gly Glu Glu Pro Asp 
1               5                   10                  15      


Ser Glu Asn Thr Pro Gln Lys 
            20              


<210>  5
<211>  26
<212>  PRT
<213>  Homo sapiens

<400>  5

Gly Gln Cys Pro Pro Pro Pro Gly Leu Pro Cys Pro Cys Thr Gly Val 
1               5                   10                  15      


Ser Asp Cys Ser Gly Gly Thr Asp Lys Lys 
            20                  25      


<210>  6
<211>  20
<212>  PRT
<213>  Homo sapiens

<400>  6

Trp Met Leu Gln Ser Met Ala Glu Trp His Cys Gln His Gln Glu Gln 
1               5                   10                  15      


Gly Met Leu Lys 
            20  


<210>  7
<211>  22
<212>  PRT
<213>  Homo sapiens

<400>  7

Asp Asp Glu Pro Asp Pro Leu Ile Leu Glu Glu Asn Asp Val Asp Asn 
1               5                   10                  15      


Met Ala Thr Asn Asn Lys 
            20          


<210>  8
<211>  21
<212>  PRT
<213>  Homo sapiens

<400>  8

Val Asn Ile Ser Cys Lys Ala Ser Gln Asp Ile Asp Asp Asp Met Asn 
1               5                   10                  15      


Trp Tyr Gln Gln Lys 
            20      


<210>  9
<211>  21
<212>  PRT
<213>  Homo sapiens

<400>  9

Asp Trp Ile Leu Tyr Ala Glu Gln Asp Ser Asn His Cys Phe Ile Ser 
1               5                   10                  15      


Thr Val Glu Cys Lys 
            20      


<210>  10
<211>  23
<212>  PRT
<213>  Homo sapiens

<400>  10

Gln Leu Leu Glu Asp Ser Thr Ser Asp Glu Asp Arg Ser Ser Ser Ser 
1               5                   10                  15      


Ser Ser Glu Gly Lys Glu Lys 
            20              


<210>  11
<211>  26
<212>  PRT
<213>  Homo sapiens

<400>  11

Ser Glu Asp Gly Thr Pro Ala Glu Asp Gly Thr Pro Ala Ala Thr Gly 
1               5                   10                  15      


Gly Ser Gln Pro Pro Ser Met Gly Arg Lys 
            20                  25      


<210>  12
<211>  23
<212>  PRT
<213>  Homo sapiens

<400>  12

Ser Gln Asp Ser Pro Glu Ile Ser Ser Leu Cys Gln Gly Glu Glu Ala 
1               5                   10                  15      


Thr Pro Arg His Ser Asp Lys 
            20              


<210>  13
<211>  25
<212>  PRT
<213>  Homo sapiens

<400>  13

Ala Val Thr Asp Thr His Glu Asn Gly Asp Leu Gly Thr Ala Ser Glu 
1               5                   10                  15      


Thr Pro Leu Asp Asp Gly Ala Ser Lys 
            20                  25  


<210>  14
<211>  24
<212>  PRT
<213>  Homo sapiens

<400>  14

Met Gln Ser Ser Ser Ser Leu Ser Ser Gly Glu Ser Ala Gln Val Ser 
1               5                   10                  15      


Thr Glu Asn Asn Glu Leu Thr Lys 
            20                  


<210>  15
<211>  24
<212>  PRT
<213>  Homo sapiens

<400>  15

Glu Gly Cys Glu Pro Gln Ser Ala Ser Pro Gln Ser Lys Glu Gln Gln 
1               5                   10                  15      


Gly Asp Ala Arg Gly Ser Pro Lys 
            20                  


<210>  16
<211>  22
<212>  PRT
<213>  Homo sapiens

<400>  16

Thr Glu Leu Cys Glu Asn Val Asp Pro Asn Ile Thr Ser Glu Asp Leu 
1               5                   10                  15      


Ser Leu His Lys Glu Asp 
            20          


<210>  17
<211>  8
<212>  PRT
<213>  Homo sapiens

<400>  17

Cys Glu Glu Met Glu Glu Gly Tyr 
1               5               


<210>  18
<211>  6
<212>  PRT
<213>  Homo sapiens

<400>  18

Thr Gln Cys Ser Gln Phe 
1               5       


<210>  19
<211>  5
<212>  PRT
<213>  Homo sapiens

<400>  19

Gly Val Gln Glu Lys 
1               5   


<210>  20
<211>  5
<212>  PRT
<213>  Homo sapiens

<400>  20

Met Val Thr Ser Leu 
1               5   


<210>  21
<211>  21
<212>  PRT
<213>  Homo sapiens

<400>  21

Ala Cys Gly Asn Gly Val Cys Gly Cys Ser Pro Gly Gly Asp Thr Asp 
1               5                   10                  15      


Thr Gln Glu Ala Lys 
            20      


<210>  22
<211>  23
<212>  PRT
<213>  Homo sapiens

<400>  22

Gly Ala Asp His Ser Ser Ala Pro Pro Ala Asp Gly Asp Asp Glu Glu 
1               5                   10                  15      


Met Met Pro Gly His His Leu 
            20              


<210>  23
<211>  23
<212>  PRT
<213>  Homo sapiens

<400>  23

Val Thr Pro Gln Glu Glu Ala Asp Ser Asp Val Gly Glu Glu Pro Asp 
1               5                   10                  15      


Ser Glu Asn Thr Pro Gln Lys 
            20              


<210>  24
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  24

Gly Gln Cys Pro Pro Pro Pro Gly Leu 
1               5                   


<210>  25
<211>  16
<212>  PRT
<213>  Homo sapiens

<400>  25

Pro Cys Pro Cys Thr Gly Val Ser Asp Cys Ser Gly Gly Thr Asp Lys 
1               5                   10                  15      


<210>  26
<211>  6
<212>  PRT
<213>  Homo sapiens

<400>  26

Gln Ser Met Ala Glu Trp 
1               5       


<210>  27
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  27

His Cys Gln His Gln Glu Gln Gly Met Leu 
1               5                   10  


<210>  28
<211>  7
<212>  PRT
<213>  Homo sapiens

<400>  28

Asp Asp Glu Pro Asp Pro Leu 
1               5           


<210>  29
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  29

Glu Glu Asn Asp Val Asp Asn Met Ala Thr Asn Asn Lys 
1               5                   10              


<210>  30
<211>  6
<212>  PRT
<213>  Homo sapiens

<400>  30

Val Asn Ile Ser Cys Lys 
1               5       


<210>  31
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  31

Ala Ser Gln Asp Ile Asp Asp Asp Met Asn Trp 
1               5                   10      


<210>  32
<211>  3
<212>  PRT
<213>  Homo sapiens

<400>  32

Gln Gln Lys 
1           


<210>  33
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  33

Ala Glu Gln Asp Ser Asn His Cys Phe 
1               5                   


<210>  34
<211>  6
<212>  PRT
<213>  Homo sapiens

<400>  34

Ser Thr Val Glu Cys Lys 
1               5       


<210>  35
<211>  18
<212>  PRT
<213>  Homo sapiens

<400>  35

Glu Asp Ser Thr Ser Asp Glu Asp Arg Ser Ser Ser Ser Ser Ser Glu 
1               5                   10                  15      


Gly Lys 
        


<210>  36
<211>  25
<212>  PRT
<213>  Homo sapiens

<400>  36

Ser Glu Asp Gly Thr Pro Ala Glu Asp Gly Thr Pro Ala Ala Thr Gly 
1               5                   10                  15      


Gly Ser Gln Pro Pro Ser Met Gly Arg 
            20                  25  


<210>  37
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  37

Ser Gln Asp Ser Pro Glu Ile Ser Ser Leu 
1               5                   10  


<210>  38
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  38

Cys Gln Gly Glu Glu Ala Thr Pro Arg 
1               5                   


<210>  39
<211>  4
<212>  PRT
<213>  Homo sapiens

<400>  39

His Ser Asp Lys 
1               


<210>  40
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  40

Ala Val Thr Asp Thr His Glu Asn Gly Asp Leu 
1               5                   10      


<210>  41
<211>  8
<212>  PRT
<213>  Homo sapiens

<400>  41

Gly Thr Ala Ser Glu Thr Pro Leu 
1               5               


<210>  42
<211>  6
<212>  PRT
<213>  Homo sapiens

<400>  42

Asp Asp Gly Ala Ser Lys 
1               5       


<210>  43
<211>  7
<212>  PRT
<213>  Homo sapiens

<400>  43

Met Gln Ser Ser Ser Ser Leu 
1               5           


<210>  44
<211>  15
<212>  PRT
<213>  Homo sapiens

<400>  44

Ser Ser Gly Glu Ser Ala Gln Val Ser Thr Glu Asn Asn Glu Leu 
1               5                   10                  15  


<210>  45
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  45

Glu Gly Cys Glu Pro Gln Ser Ala Ser Pro Gln Ser Lys 
1               5                   10              


<210>  46
<211>  7
<212>  PRT
<213>  Homo sapiens

<400>  46

Glu Gln Gln Gly Asp Ala Arg 
1               5           


<210>  47
<211>  4
<212>  PRT
<213>  Homo sapiens

<400>  47

Gly Ser Pro Lys 
1               


<210>  48
<211>  3
<212>  PRT
<213>  Homo sapiens

<400>  48

Thr Glu Leu 
1           


<210>  49
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  49

Cys Glu Asn Val Asp Pro Asn Ile Thr Ser Glu Asp Leu 
1               5                   10              


<210>  50
<211>  21
<212>  PRT
<213>  Carassius auratus

<400>  50

Ser Pro Ala Asn Ala Gln Ile Thr Arg Lys Arg His Lys Ile Asn Ser 
1               5                   10                  15      


Phe Val Gly Leu Met 
            20      


<210>  51
<211>  9
<212>  PRT
<213>  Carassius auratus

<400>  51

Ser Pro Ala Asn Ala Gln Ile Thr Arg 
1               5                   


<210>  52
<211>  8
<212>  PRT
<213>  Carassius auratus

<400>  52

Ile Asn Ser Phe Val Gly Leu Met 
1               5               


<210>  53
<211>  10
<212>  PRT
<213>  Carassius auratus

<400>  53

His Lys Ile Asn Ser Phe Val Gly Leu Met 
1               5                   10  


