
                                SEQUENCE LISTING

<110> Merck & Co., Inc.

<120> LIVE, ATTENUATED RESPIRATORY SYNCYTIAL
  VIRUS

<130> MRL-IFD-22569

<150> 61/198,327          
<151> 2008-11-05  

<160> 95

<170> FastSEQ for Windows Version 4.0

<210> 1
<211> 375
<212> DNA
<213> Respiratory syncytial virus, S2

<400> 1
atggacacaa cacacaatga caccacacca caaagactga tgatcacaga catgagacca 60
ttgtcacttg agactataat aatatcacta accagagaca tcataacaca cagatttata 120
tacttgataa atcatgaatg tatagtgaga aaacttgatg aaagacaggc cacatttaca 180
ttcctggtca actatgaaat gaaactattg cacaaagtgg gaagcactaa atacaaaaaa 240
tatactgaat acaacacaaa atatggcact tttcctatgc caatatttat caatcatgat 300
gggttcttag aatgcattgg cattaagcct acaaagcaca ctcccataat atacaagtat 360
gatctcaatc catga                                                  375

<210> 2
<211> 124
<212> PRT
<213> Respiratory syncytial virus, S2 strain

<400> 2
Met Asp Thr Thr His Asn Asp Thr Thr Pro Gln Arg Leu Met Ile Thr
 1               5                  10                  15      
Asp Met Arg Pro Leu Ser Leu Glu Thr Ile Ile Ile Ser Leu Thr Arg
            20                  25                  30          
Asp Ile Ile Thr His Arg Phe Ile Tyr Leu Ile Asn His Glu Cys Ile
        35                  40                  45              
Val Arg Lys Leu Asp Glu Arg Gln Ala Thr Phe Thr Phe Leu Val Asn
    50                  55                  60                  
Tyr Glu Met Lys Leu Leu His Lys Val Gly Ser Thr Lys Tyr Lys Lys
65                  70                  75                  80  
Tyr Thr Glu Tyr Asn Thr Lys Tyr Gly Thr Phe Pro Met Pro Ile Phe
                85                  90                  95      
Ile Asn His Asp Gly Phe Leu Glu Cys Ile Gly Ile Lys Pro Thr Lys
            100                 105                 110         
His Thr Pro Ile Ile Tyr Lys Tyr Asp Leu Asn Pro
        115                 120                 


<210> 3
<211> 375
<212> DNA
<213> Respiratory syncytial virus, Merck strain 287

<400> 3
atggacacga ctcacaatga taccacacca caaagactga tgatcacaga tatgagacca 60
ttgtcacttg agaccataat aacatcacta accagagaca tcataacaca caaatttata 120
tacttgataa atcatgaatg catagtgaga aaacttgatg aaagacaagc cacatttaca 180
ttcctggtca actatgaaat gaaactattg cacaaagtag gaagcactaa atataaaaaa 240
tatactgaat acaacacaaa atatggcact ttccctatgc cgatattcat caatcatgat 300
gggttcttag aatgcattgg cattaagcct acaaagcata ctcccataat atacaagtat 360
gatctcaatc cataa                                                  375

<210> 4
<211> 124
<212> PRT
<213> Respiratory syncytial virus, Merck strain 287

<400> 4
Met Asp Thr Thr His Asn Asp Thr Thr Pro Gln Arg Leu Met Ile Thr
 1               5                  10                  15      
Asp Met Arg Pro Leu Ser Leu Glu Thr Ile Ile Thr Ser Leu Thr Arg
            20                  25                  30          
Asp Ile Ile Thr His Lys Phe Ile Tyr Leu Ile Asn His Glu Cys Ile
        35                  40                  45              
Val Arg Lys Leu Asp Glu Arg Gln Ala Thr Phe Thr Phe Leu Val Asn
    50                  55                  60                  
Tyr Glu Met Lys Leu Leu His Lys Val Gly Ser Thr Lys Tyr Lys Lys
65                  70                  75                  80  
Tyr Thr Glu Tyr Asn Thr Lys Tyr Gly Thr Phe Pro Met Pro Ile Phe
                85                  90                  95      
Ile Asn His Asp Gly Phe Leu Glu Cys Ile Gly Ile Lys Pro Thr Lys
            100                 105                 110         
His Thr Pro Ile Ile Tyr Lys Tyr Asp Leu Asn Pro
        115                 120                 


<210> 5
<211> 375
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17

<400> 5
atggacacga ctcacaatga taccacacca caaagactga tgatcacaga tatgagacca 60
ttgtcacttg agaccataat aacatcacta accagagaca tcataacaca caaatttata 120
tacttgataa atcatgaatg catagtgaga aaacttgatg aaagacaagc cacatttaca 180
ttcctggtca actatgaaat gaaactattg cacaaagtag gaagcactaa atataaaaaa 240
tatactgaat acaacacaaa atatggcact ttccctatgc cgatattcat caatcatgat 300
gggttcttag aatgcattgg cattaaacct acaaagcata ctcccataat atacaagtat 360
gatctcaatc cataa                                                  375

<210> 6
<211> 124
<212> PRT
<213> Respiratory syncytial virus, Merck strain p17

<400> 6
Met Asp Thr Thr His Asn Asp Thr Thr Pro Gln Arg Leu Met Ile Thr
 1               5                  10                  15      
Asp Met Arg Pro Leu Ser Leu Glu Thr Ile Ile Thr Ser Leu Thr Arg
            20                  25                  30          
Asp Ile Ile Thr His Lys Phe Ile Tyr Leu Ile Asn His Glu Cys Ile
        35                  40                  45              
Val Arg Lys Leu Asp Glu Arg Gln Ala Thr Phe Thr Phe Leu Val Asn
    50                  55                  60                  
Tyr Glu Met Lys Leu Leu His Lys Val Gly Ser Thr Lys Tyr Lys Lys
65                  70                  75                  80  
Tyr Thr Glu Tyr Asn Thr Lys Tyr Gly Thr Phe Pro Met Pro Ile Phe
                85                  90                  95      
Ile Asn His Asp Gly Phe Leu Glu Cys Ile Gly Ile Lys Pro Thr Lys
            100                 105                 110         
His Thr Pro Ile Ile Tyr Lys Tyr Asp Leu Asn Pro
        115                 120                 


<210> 7
<211> 897
<212> DNA
<213> Respiratory syncytial virus, S2

<400> 7
atgtccaaaa acaaggacca acgcaccgcc aagacactag aaaagacctg ggacactctc 60
aatcatctat tattcatatc atcgtgctta tacaagttaa atcttaaatc tatagcacaa 120
atcacattat ccattctggc aatgataatc tcaacttcac ttataattgc agccatcata 180
ttcatagcct cggcaaacca caaagtcaca ctaacaactg caatcataca agatgcaaca 240
agccagatca agaacacaac cccaacatac ctcacccaga atccccagct tggaatcagc 300
ttctccaatc tgtctgaaac tacatcacaa accaccacca tactagcttc aacaacacca 360
agtgtcaagt caaccctgca atccacaaca gtcaagacca aaaacacaac aacaaccaaa 420
atacaaccca gcaagcccac cacaaaacaa cgccaaaaca aaccaccaaa caaacccaat 480
aatgattttc actttgaagt gttcaacttt gtaccttgca gcatatgcag caacaatcca 540
acctgctggg ctatctgtaa aagaatacca aacaaaaaac ctggaaagaa aaccaccacc 600
aagcccacaa aaaaaccaac catcaagaca accaaaaaag atctcaaacc tcaaaccaca 660
aaaccaaagg aagtacctac caccaagccc acagaaaagc caaccatcaa caccaccaaa 720
acaaacatca gaactacact gctcaccaac aataccacag gaaatccaga acacacaagt 780
caaaagggaa ccctccactc aacctcctcc gatggcaatc caagcccttc acaagtctat 840
acaacatccg agtacctatc acaacctcca tctccatcca acacaacaaa ccagtag    897

<210> 8
<211> 298
<212> PRT
<213> Respiratory syncytial virus, S2

<400> 8
Met Ser Lys Asn Lys Asp Gln Arg Thr Ala Lys Thr Leu Glu Lys Thr
 1               5                  10                  15      
Trp Asp Thr Leu Asn His Leu Leu Phe Ile Ser Ser Cys Leu Tyr Lys
            20                  25                  30          
Leu Asn Leu Lys Ser Ile Ala Gln Ile Thr Leu Ser Ile Leu Ala Met
        35                  40                  45              
Ile Ile Ser Thr Ser Leu Ile Ile Ala Ala Ile Ile Phe Ile Ala Ser
    50                  55                  60                  
Ala Asn His Lys Val Thr Leu Thr Thr Ala Ile Ile Gln Asp Ala Thr
65                  70                  75                  80  
Ser Gln Ile Lys Asn Thr Thr Pro Thr Tyr Leu Thr Gln Asn Pro Gln
                85                  90                  95      
Leu Gly Ile Ser Phe Ser Asn Leu Ser Glu Thr Thr Ser Gln Thr Thr
            100                 105                 110         
Thr Ile Leu Ala Ser Thr Thr Pro Ser Val Lys Ser Thr Leu Gln Ser
        115                 120                 125             
Thr Thr Val Lys Thr Lys Asn Thr Thr Thr Thr Lys Ile Gln Pro Ser
    130                 135                 140                 
Lys Pro Thr Thr Lys Gln Arg Gln Asn Lys Pro Pro Asn Lys Pro Asn
145                 150                 155                 160 
Asn Asp Phe His Phe Glu Val Phe Asn Phe Val Pro Cys Ser Ile Cys
                165                 170                 175     
Ser Asn Asn Pro Thr Cys Trp Ala Ile Cys Lys Arg Ile Pro Asn Lys
            180                 185                 190         
Lys Pro Gly Lys Lys Thr Thr Thr Lys Pro Thr Lys Lys Pro Thr Ile
        195                 200                 205             
Lys Thr Thr Lys Lys Asp Leu Lys Pro Gln Thr Thr Lys Pro Lys Glu
    210                 215                 220                 
Val Pro Thr Thr Lys Pro Thr Glu Lys Pro Thr Ile Asn Thr Thr Lys
225                 230                 235                 240 
Thr Asn Ile Arg Thr Thr Leu Leu Thr Asn Asn Thr Thr Gly Asn Pro
                245                 250                 255     
Glu His Thr Ser Gln Lys Gly Thr Leu His Ser Thr Ser Ser Asp Gly
            260                 265                 270         
Asn Pro Ser Pro Ser Gln Val Tyr Thr Thr Ser Glu Tyr Leu Ser Gln
        275                 280                 285             
Pro Pro Ser Pro Ser Asn Thr Thr Asn Gln
    290                 295             


<210> 9
<211> 900
<212> DNA
<213> Respiratory syncytial virus, Merck strain 287

<400> 9
atgtccaaaa acaaagacca acgcactgct aagacactag aaaggacctg ggacactctc 60
aatcatttat tattcatatc atcgtgctta tataagttaa atcttaaatc tgtagcacaa 120
atcacattat ccattttggc aatgataatc tcaacttcac ttataattgc agccatcata 180
ttcattgcct cggcaaacca caaagtcaca tcaacaacta caatcataca agatgcaaca 240
agccagatca agaacacaac cccaacatac ctcacccaga gtcctcagct tggaatcagt 300
ccctctaatc cgtctgaaat tacatcacaa atcaccacca tactagcttc aacaacacca 360
ggagtcaagt caaccctgca atccacaaca gtcgggacca agaatacaac aacaactcaa 420
gcacaaccca gcaagcccac cacaaaacaa cgccaaaaca aaccaccaag caaacccaac 480
aatgattttc actttgaagt gttcaacttt gtaccctgca gcatatgcag caacaatcca 540
acctgctggg ccatctgcaa aagaataccc aacaaaaaac caggaaagaa aaccaccacc 600
aagcccacaa aaaaaccaac cttcaagaca accaaaaaag atcccaaacc tcaaaccact 660
aaatcaaagg aggtacccac caccaagccc acagaagagc caactatcaa caccaccaaa 720
acaaacatca caactacact actcacctcc aacaccacga gaaatccaga actcacaagt 780
caaatggaaa ccttccactc aacttcctcc gaaggtaatc caagcccttc tcaagtctcc 840
ataacatccg agtacctatc acaaccttca tctccaccca acacaccacg ctagtagtta 900


<210> 10
<211> 297
<212> PRT
<213> Respiratory syncytial virus, Merck strain 287

<400> 10
Met Ser Lys Asn Lys Asp Gln Arg Thr Ala Lys Thr Leu Glu Arg Thr
 1               5                  10                  15      
Trp Asp Thr Leu Asn His Leu Leu Phe Ile Ser Ser Cys Leu Tyr Lys
            20                  25                  30          
Leu Asn Leu Lys Ser Val Ala Gln Ile Thr Leu Ser Ile Leu Ala Met
        35                  40                  45              
Ile Ile Ser Thr Ser Leu Ile Ile Ala Ala Ile Ile Phe Ile Ala Ser
    50                  55                  60                  
Ala Asn His Lys Val Thr Ser Thr Thr Thr Ile Ile Gln Asp Ala Thr
65                  70                  75                  80  
Ser Gln Ile Lys Asn Thr Thr Pro Thr Tyr Leu Thr Gln Ser Pro Gln
                85                  90                  95      
Leu Gly Ile Ser Pro Ser Asn Pro Ser Glu Ile Thr Ser Gln Ile Thr
            100                 105                 110         
Thr Ile Leu Ala Ser Thr Thr Pro Gly Val Lys Ser Thr Leu Gln Ser
        115                 120                 125             
Thr Thr Val Gly Thr Lys Asn Thr Thr Thr Thr Gln Ala Gln Pro Ser
    130                 135                 140                 
Lys Pro Thr Thr Lys Gln Arg Gln Asn Lys Pro Pro Ser Lys Pro Asn
145                 150                 155                 160 
Asn Asp Phe His Phe Glu Val Phe Asn Phe Val Pro Cys Ser Ile Cys
                165                 170                 175     
Ser Asn Asn Pro Thr Cys Trp Ala Ile Cys Lys Arg Ile Pro Asn Lys
            180                 185                 190         
Lys Pro Gly Lys Lys Thr Thr Thr Lys Pro Thr Lys Lys Pro Thr Phe
        195                 200                 205             
Lys Thr Thr Lys Lys Asp Pro Lys Pro Gln Thr Thr Lys Ser Lys Glu
    210                 215                 220                 
Val Pro Thr Thr Lys Pro Thr Glu Glu Pro Thr Ile Asn Thr Thr Lys
225                 230                 235                 240 
Thr Asn Ile Thr Thr Thr Leu Leu Thr Ser Asn Thr Thr Arg Asn Pro
                245                 250                 255     
Glu Leu Thr Ser Gln Met Glu Thr Phe His Ser Thr Ser Ser Glu Gly
            260                 265                 270         
Asn Pro Ser Pro Ser Gln Val Ser Ile Thr Ser Glu Tyr Leu Ser Gln
        275                 280                 285             
Pro Ser Ser Pro Pro Asn Thr Pro Arg
    290                 295         


<210> 11
<211> 900
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17

<400> 11
atgtccaaaa acaaagacca acgcactgct aagacactag aaaggacctg ggacactctc 60
aatcatttat tattcatatc atcgtgctta tataagttaa atcttaaatc tgtagcacaa 120
atcacattat ccattttggc aatgataatc tcaacttcac ttataattgc agccatcata 180
ttcattgcct cggcaaacca caaagtcaca tcaacaacta caatcataca agatgcaaca 240
agccagatca agaacacaac cccaacatac ctcacccaga gtcctcagct tggaatcagt 300
ccctctaatc cgtctgaaat tacatcacaa atcaccacca tactagcttc aacaacacca 360
ggagtcaagt caaccctgca atccacaaca gtcgggacca agaatacaac aacaactcaa 420
gcacaaccca gcaagcccac cacaaaacaa cgccaaaaca aaccaccaag caaacccaac 480
aatgattttc actttgaagt gttcaacttt gtaccctgca gcatatgcag caacaatcca 540
acctgctggg ccatctgcaa aagaataccc aacaaaaaac caggaaagaa aaccaccacc 600
aagcccacag aagaaccaac cttcaagacg gccaaagagg atcccaaacc tcagaccact 660
ggatcggggg aggtgcccac caccaagccc acaggggagc caactatcaa caccaccaaa 720
acaaacatca caactacact actcacctcc aacaccacga gaaatccaga actcacaagt 780
caaatggaaa ccttccactc aacttcctcc gaaggtaatc caagcccttc tcaagtctcc 840
ataacatccg agtacctatc acaaccttca tctccaccca acacaccacg ctagtagtta 900


<210> 12
<211> 297
<212> PRT
<213> Respiratory syncytial virus, Merck strain p17

<400> 12
Met Ser Lys Asn Lys Asp Gln Arg Thr Ala Lys Thr Leu Glu Arg Thr
 1               5                  10                  15      
Trp Asp Thr Leu Asn His Leu Leu Phe Ile Ser Ser Cys Leu Tyr Lys
            20                  25                  30          
Leu Asn Leu Lys Ser Val Ala Gln Ile Thr Leu Ser Ile Leu Ala Met
        35                  40                  45              
Ile Ile Ser Thr Ser Leu Ile Ile Ala Ala Ile Ile Phe Ile Ala Ser
    50                  55                  60                  
Ala Asn His Lys Val Thr Ser Thr Thr Thr Ile Ile Gln Asp Ala Thr
65                  70                  75                  80  
Ser Gln Ile Lys Asn Thr Thr Pro Thr Tyr Leu Thr Gln Ser Pro Gln
                85                  90                  95      
Leu Gly Ile Ser Pro Ser Asn Pro Ser Glu Ile Thr Ser Gln Ile Thr
            100                 105                 110         
Thr Ile Leu Ala Ser Thr Thr Pro Gly Val Lys Ser Thr Leu Gln Ser
        115                 120                 125             
Thr Thr Val Gly Thr Lys Asn Thr Thr Thr Thr Gln Ala Gln Pro Ser
    130                 135                 140                 
Lys Pro Thr Thr Lys Gln Arg Gln Asn Lys Pro Pro Ser Lys Pro Asn
145                 150                 155                 160 
Asn Asp Phe His Phe Glu Val Phe Asn Phe Val Pro Cys Ser Ile Cys
                165                 170                 175     
Ser Asn Asn Pro Thr Cys Trp Ala Ile Cys Lys Arg Ile Pro Asn Lys
            180                 185                 190         
Lys Pro Gly Lys Lys Thr Thr Thr Lys Pro Thr Glu Glu Pro Thr Phe
        195                 200                 205             
Lys Thr Ala Lys Glu Asp Pro Lys Pro Gln Thr Thr Gly Ser Gly Glu
    210                 215                 220                 
Val Pro Thr Thr Lys Pro Thr Gly Glu Pro Thr Ile Asn Thr Thr Lys
225                 230                 235                 240 
Thr Asn Ile Thr Thr Thr Leu Leu Thr Ser Asn Thr Thr Arg Asn Pro
                245                 250                 255     
Glu Leu Thr Ser Gln Met Glu Thr Phe His Ser Thr Ser Ser Glu Gly
            260                 265                 270         
Asn Pro Ser Pro Ser Gln Val Ser Ile Thr Ser Glu Tyr Leu Ser Gln
        275                 280                 285             
Pro Ser Ser Pro Pro Asn Thr Pro Arg
    290                 295         


<210> 13
<211> 1725
<212> DNA
<213> Respiratory syncytial virus, S2

<400> 13
atggagttgc caatcctcaa aacaaatgca attaccgcaa tccttgctgc agtcacactc 60
tgttttgctt ccagtcaaaa catcactgaa gaattttatc aatcaacatg cagtgcagtc 120
agcaaaggct atcttagtgc tctaagaact ggttggtata ctagtgttat aactatagaa 180
ttaagtaata tcaaggaaaa taagtgtaat ggaacagatg ctaaggtaaa attgataaaa 240
caagaattag ataaatataa aagtgctgta acagaattgc agttgctcat gcaaagcaca 300
ccggcaacca acaatcgagc cagaagagaa ctaccaaggt ttatgaatta tacactcaac 360
aataccaaaa ataccaatgt aacattaagc aagaaaagga aaagaagatt tcttggcttt 420
ttgttaggtg ttggatctgc aatcgccagt ggcattgctg tatctaaggt cctgcaccta 480
gaaggggaag tgaacaagat caaaagtgct ctactatcca caaacaaggc tgtagtcagc 540
ttatcaaatg gagttagtgt cttaaccagc aaagtgttag acctcaaaaa ctatatagat 600
aaacagttgt tacctattgt gaacaagcaa agctgtagca tatcaaacat tgaaactgtg 660
atagagttcc aacaaaagaa caacagacta ctagagatta ccagggaatt tagtgttaat 720
gcaggtgtaa ctacacctgt aagcacttat atgttaacaa atagtgaatt attatcatta 780
atcaatgata tgcctataac aaatgatcag aaaaagttaa tgtccaacaa tgttcaaata 840
gttagacagc aaagttactc tatcatgtcc ataataaagg aggaagtctt agcatatgta 900
gtacaattac cactatatgg tgtaatagat acaccttgtt ggaaactaca cacatcccct 960
ctatgtacaa ccaacacaaa ggaagggtcc aacatctgtt taacaagaac cgacagagga 1020
tggtactgtg acaatgcagg atcagtatct ttcttcccac tagctgaaac atgtaaagtt 1080
caatcgaatc gagtattttg tgacacaatg aacagtttaa cattaccaag tgaagtaaat 1140
ctctgcaaca ttgacatatt caaccccaaa tatgattgca aaattatgac ttcaaaaaca 1200
gatgtaagca gctccgttat cacatctcta ggagccattg tgtcatgcta tggcaaaact 1260
aaatgtacag catccaataa aaatcgtgga atcataaaga cattttctaa cgggtgcgat 1320
tatgtatcaa ataagggggt ggacactgtg tctgtaggta atacattata ttatgtaaat 1380
aagcaagaag gcaaaagtct ctatgtaaaa ggtgaaccaa taataaattt ctatgaccca 1440
ttagtgttcc cctctgatga atttgatgca tcaatatctc aagtcaatga gaagattaac 1500
cagagcctag catttattcg taaatccgat gaattattac ataatgtaaa tgctggtaaa 1560
tccaccacaa atatcatgat aactactata attatagtga ttatagtaat attgttatca 1620
ttaattgccg ttggactgct cctatactgc aaggccagaa gcacaccagt cacactaagc 1680
aaggatcaac tgagtggtat aaataatatt gcatttagta actaa                 1725

<210> 14
<211> 574
<212> PRT
<213> Respiratory syncytial virus, S2

<400> 14
Met Glu Leu Pro Ile Leu Lys Thr Asn Ala Ile Thr Ala Ile Leu Ala
 1               5                  10                  15      
Ala Val Thr Leu Cys Phe Ala Ser Ser Gln Asn Ile Thr Glu Glu Phe
            20                  25                  30          
Tyr Gln Ser Thr Cys Ser Ala Val Ser Lys Gly Tyr Leu Ser Ala Leu
        35                  40                  45              
Arg Thr Gly Trp Tyr Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile
    50                  55                  60                  
Lys Glu Asn Lys Cys Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys
65                  70                  75                  80  
Gln Glu Leu Asp Lys Tyr Lys Ser Ala Val Thr Glu Leu Gln Leu Leu
                85                  90                  95      
Met Gln Ser Thr Pro Ala Thr Asn Asn Arg Ala Arg Arg Glu Leu Pro
            100                 105                 110         
Arg Phe Met Asn Tyr Thr Leu Asn Asn Thr Lys Asn Thr Asn Val Thr
        115                 120                 125             
Leu Ser Lys Lys Arg Lys Arg Arg Phe Leu Gly Phe Leu Leu Gly Val
    130                 135                 140                 
Gly Ser Ala Ile Ala Ser Gly Ile Ala Val Ser Lys Val Leu His Leu
145                 150                 155                 160 
Glu Gly Glu Val Asn Lys Ile Lys Ser Ala Leu Leu Ser Thr Asn Lys
                165                 170                 175     
Ala Val Val Ser Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val
            180                 185                 190         
Leu Asp Leu Lys Asn Tyr Ile Asp Lys Gln Leu Leu Pro Ile Val Asn
        195                 200                 205             
Lys Gln Ser Cys Ser Ile Ser Asn Ile Glu Thr Val Ile Glu Phe Gln
    210                 215                 220                 
Gln Lys Asn Asn Arg Leu Leu Glu Ile Thr Arg Glu Phe Ser Val Asn
225                 230                 235                 240 
Ala Gly Val Thr Thr Pro Val Ser Thr Tyr Met Leu Thr Asn Ser Glu
                245                 250                 255     
Leu Leu Ser Leu Ile Asn Asp Met Pro Ile Thr Asn Asp Gln Lys Lys
            260                 265                 270         
Leu Met Ser Asn Asn Val Gln Ile Val Arg Gln Gln Ser Tyr Ser Ile
        275                 280                 285             
Met Ser Ile Ile Lys Glu Glu Val Leu Ala Tyr Val Val Gln Leu Pro
    290                 295                 300                 
Leu Tyr Gly Val Ile Asp Thr Pro Cys Trp Lys Leu His Thr Ser Pro
305                 310                 315                 320 
Leu Cys Thr Thr Asn Thr Lys Glu Gly Ser Asn Ile Cys Leu Thr Arg
                325                 330                 335     
Thr Asp Arg Gly Trp Tyr Cys Asp Asn Ala Gly Ser Val Ser Phe Phe
            340                 345                 350         
Pro Leu Ala Glu Thr Cys Lys Val Gln Ser Asn Arg Val Phe Cys Asp
        355                 360                 365             
Thr Met Asn Ser Leu Thr Leu Pro Ser Glu Val Asn Leu Cys Asn Ile
    370                 375                 380                 
Asp Ile Phe Asn Pro Lys Tyr Asp Cys Lys Ile Met Thr Ser Lys Thr
385                 390                 395                 400 
Asp Val Ser Ser Ser Val Ile Thr Ser Leu Gly Ala Ile Val Ser Cys
                405                 410                 415     
Tyr Gly Lys Thr Lys Cys Thr Ala Ser Asn Lys Asn Arg Gly Ile Ile
            420                 425                 430         
Lys Thr Phe Ser Asn Gly Cys Asp Tyr Val Ser Asn Lys Gly Val Asp
        435                 440                 445             
Thr Val Ser Val Gly Asn Thr Leu Tyr Tyr Val Asn Lys Gln Glu Gly
    450                 455                 460                 
Lys Ser Leu Tyr Val Lys Gly Glu Pro Ile Ile Asn Phe Tyr Asp Pro
465                 470                 475                 480 
Leu Val Phe Pro Ser Asp Glu Phe Asp Ala Ser Ile Ser Gln Val Asn
                485                 490                 495     
Glu Lys Ile Asn Gln Ser Leu Ala Phe Ile Arg Lys Ser Asp Glu Leu
            500                 505                 510         
Leu His Asn Val Asn Ala Gly Lys Ser Thr Thr Asn Ile Met Ile Thr
        515                 520                 525             
Thr Ile Ile Ile Val Ile Ile Val Ile Leu Leu Ser Leu Ile Ala Val
    530                 535                 540                 
Gly Leu Leu Leu Tyr Cys Lys Ala Arg Ser Thr Pro Val Thr Leu Ser
545                 550                 555                 560 
Lys Asp Gln Leu Ser Gly Ile Asn Asn Ile Ala Phe Ser Asn
                565                 570                 


<210> 15
<211> 1725
<212> DNA
<213> Respiratory syncytial virus, Merck strain 287

<400> 15
atggagttgc caatcctcaa agcgaatgca attaccacaa tcctcactgc agtcacattt 60
tgttttgctt ctagtcaaaa catcactgaa gaattttatc aatcaacatg cagtgcagtt 120
agcaaaggct atcttagtgc tctaagaact ggttggtata ccagtgttat aactatagaa 180
ttaagtaata tcaaggaaaa taagtgtaat ggaacagatg ctaaggtaaa attgataaaa 240
caagaattag ataaatataa aaatgctgta acagaattgc agttgctaat gcaaagcaca 300
ccagcagcaa acaatcgagc cagaagagaa ctaccaaggt ttatgaatta tacactcaac 360
aatgccaaaa aaaccaatgt aacattaagc aaaaaaagga aaagaagatt tcttggtttt 420
ttgttaggag ttggatctgc aatcgccagt ggcattgctg tatctaaggt cctacaccta 480
gaaggggaag tgaacaagat caaaagtgct ctactatcca caaacaaggc tgtagtcagc 540
ttatcaaatg gagttagtgt cttaaccagc aaagtgttag acctcaaaaa ttatatagat 600
aaacaattgt tacctattgt gaacaagcaa agctgcagca tatcaaatat agaaactgtg 660
atagagttcc aacaaaagaa caacagacta ctagagatta ccagggaatt tagtgttaat 720
gcaggtgtaa ctacacctgt aagcacttac atgttgacta atagtgaatt attgtcatta 780
atcaatgata tgcctataac aaatgatcag aagaagttaa tgtccaacaa tgttcaaata 840
gttagacagc aaagttactc tatcatgtcc ataataaaag aggaagtctt agcatatgta 900
gtacaattac cactatatgg tgttatagat acaccttgtt ggaaattaca cacatcccct 960
ctatgtacaa ccaacacaaa agaagggtcc aacatctgtt taacaagaac tgacagagga 1020
tggtactgtg acaatgcagg atcagtctct ttcttcccac aagctgaaac atgtaaagtt 1080
caatcgaatc gagtattttg tgacacaatg aacagtttaa cattaccaag tgaagtaaat 1140
ctctgcaatg ttgacatatt caatcccaaa tatgattgta aaattatgac ttcaaaaaca 1200
gatgtaagca gctctgttat cacatctcta ggagccattg tgtcatgcta tggcaaaact 1260
aaatgtacag catccaataa aaatcgtgga atcataaaga cattttctaa cgggtgcgat 1320
tatgtatcaa ataaaggggt ggacactgtg tctgtaggca acacattata ttatgtaaat 1380
aagcaagaag gcaaaagtct ctatgtaaaa ggtgaaccaa taataaattt ctatgaccca 1440
ttagtattcc cctctgatga atttgatgca tcaatatctc aagtcaacga gaagattaac 1500
cagagcctgg catttattcg taaatccgat gaattattac ataatgtaaa tgctggtaaa 1560
tccaccacaa acatcatgat aactgctata attatagtga ttgtagtaat attattatca 1620
ttaattgctg taggactgct cctatactgt aaggccagaa gcacaccagt cacactaagc 1680
aaagatcaac tgagtggtat aaataatatt gcatttagta actaa                 1725

<210> 16
<211> 574
<212> PRT
<213> Respiratory syncytial virus, Merck strain 287

<400> 16
Met Glu Leu Pro Ile Leu Lys Ala Asn Ala Ile Thr Thr Ile Leu Thr
 1               5                  10                  15      
Ala Val Thr Phe Cys Phe Ala Ser Ser Gln Asn Ile Thr Glu Glu Phe
            20                  25                  30          
Tyr Gln Ser Thr Cys Ser Ala Val Ser Lys Gly Tyr Leu Ser Ala Leu
        35                  40                  45              
Arg Thr Gly Trp Tyr Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile
    50                  55                  60                  
Lys Glu Asn Lys Cys Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys
65                  70                  75                  80  
Gln Glu Leu Asp Lys Tyr Lys Asn Ala Val Thr Glu Leu Gln Leu Leu
                85                  90                  95      
Met Gln Ser Thr Pro Ala Ala Asn Asn Arg Ala Arg Arg Glu Leu Pro
            100                 105                 110         
Arg Phe Met Asn Tyr Thr Leu Asn Asn Ala Lys Lys Thr Asn Val Thr
        115                 120                 125             
Leu Ser Lys Lys Arg Lys Arg Arg Phe Leu Gly Phe Leu Leu Gly Val
    130                 135                 140                 
Gly Ser Ala Ile Ala Ser Gly Ile Ala Val Ser Lys Val Leu His Leu
145                 150                 155                 160 
Glu Gly Glu Val Asn Lys Ile Lys Ser Ala Leu Leu Ser Thr Asn Lys
                165                 170                 175     
Ala Val Val Ser Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val
            180                 185                 190         
Leu Asp Leu Lys Asn Tyr Ile Asp Lys Gln Leu Leu Pro Ile Val Asn
        195                 200                 205             
Lys Gln Ser Cys Ser Ile Ser Asn Ile Glu Thr Val Ile Glu Phe Gln
    210                 215                 220                 
Gln Lys Asn Asn Arg Leu Leu Glu Ile Thr Arg Glu Phe Ser Val Asn
225                 230                 235                 240 
Ala Gly Val Thr Thr Pro Val Ser Thr Tyr Met Leu Thr Asn Ser Glu
                245                 250                 255     
Leu Leu Ser Leu Ile Asn Asp Met Pro Ile Thr Asn Asp Gln Lys Lys
            260                 265                 270         
Leu Met Ser Asn Asn Val Gln Ile Val Arg Gln Gln Ser Tyr Ser Ile
        275                 280                 285             
Met Ser Ile Ile Lys Glu Glu Val Leu Ala Tyr Val Val Gln Leu Pro
    290                 295                 300                 
Leu Tyr Gly Val Ile Asp Thr Pro Cys Trp Lys Leu His Thr Ser Pro
305                 310                 315                 320 
Leu Cys Thr Thr Asn Thr Lys Glu Gly Ser Asn Ile Cys Leu Thr Arg
                325                 330                 335     
Thr Asp Arg Gly Trp Tyr Cys Asp Asn Ala Gly Ser Val Ser Phe Phe
            340                 345                 350         
Pro Gln Ala Glu Thr Cys Lys Val Gln Ser Asn Arg Val Phe Cys Asp
        355                 360                 365             
Thr Met Asn Ser Leu Thr Leu Pro Ser Glu Val Asn Leu Cys Asn Val
    370                 375                 380                 
Asp Ile Phe Asn Pro Lys Tyr Asp Cys Lys Ile Met Thr Ser Lys Thr
385                 390                 395                 400 
Asp Val Ser Ser Ser Val Ile Thr Ser Leu Gly Ala Ile Val Ser Cys
                405                 410                 415     
Tyr Gly Lys Thr Lys Cys Thr Ala Ser Asn Lys Asn Arg Gly Ile Ile
            420                 425                 430         
Lys Thr Phe Ser Asn Gly Cys Asp Tyr Val Ser Asn Lys Gly Val Asp
        435                 440                 445             
Thr Val Ser Val Gly Asn Thr Leu Tyr Tyr Val Asn Lys Gln Glu Gly
    450                 455                 460                 
Lys Ser Leu Tyr Val Lys Gly Glu Pro Ile Ile Asn Phe Tyr Asp Pro
465                 470                 475                 480 
Leu Val Phe Pro Ser Asp Glu Phe Asp Ala Ser Ile Ser Gln Val Asn
                485                 490                 495     
Glu Lys Ile Asn Gln Ser Leu Ala Phe Ile Arg Lys Ser Asp Glu Leu
            500                 505                 510         
Leu His Asn Val Asn Ala Gly Lys Ser Thr Thr Asn Ile Met Ile Thr
        515                 520                 525             
Ala Ile Ile Ile Val Ile Val Val Ile Leu Leu Ser Leu Ile Ala Val
    530                 535                 540                 
Gly Leu Leu Leu Tyr Cys Lys Ala Arg Ser Thr Pro Val Thr Leu Ser
545                 550                 555                 560 
Lys Asp Gln Leu Ser Gly Ile Asn Asn Ile Ala Phe Ser Asn
                565                 570                 


<210> 17
<211> 1725
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17

<220> 
<221> variation      
<222> (880)...(880)
<223> n = g or a

<220> 
<221> variation      
<222> (1457)...(1457)
<223> n = g or a

<400> 17
atggagttgc caatcctcaa agcgaatgca attaccacaa tcctcactgc agtcacattt 60
tgttttgctt ctagtcaaaa catcactgaa gaattttatc aatcaacatg cagtgcagtt 120
agcaaaggct atcttagtgc tctaagaact ggttggtata ccagtgttat aactatagaa 180
ttaagtaata tcaaggaaaa taagtgtaat ggaacagatg ctaaggtaaa attgataaaa 240
caagaattag ataaatataa aaatgctgta acagaattgc agttgctaat gcaaagcaca 300
ccagcagcaa acaatcgagc cagaagagaa ctaccaaggt ttatgaatta tacactcaac 360
aatgccaaaa aaaccaatgt aacattaagc aaaaaaagga aaagaagatt tcttggtttt 420
ttgttaggag ttggatctgc aatcgccagt ggcattgctg tatctaaggt cctacaccta 480
gaaggggaag tgaacaagat caaaagtgct ctactatcca caaacaaggc tgtagtcagc 540
ttatcaaatg gagttagtgt cttaaccagc aaagtgttag acctcaaaaa ttatatagat 600
aaacaattgt tacctattgt gaacaagcaa agctgcagca tatcaaatat agaaactgtg 660
atagagttcc aacaaaagaa caacagacta ctagagatta ccagggaatt tagtgttaat 720
gcaggtgtaa ctacacctgt aagcacttac atgttgacta atagtgaatt attgtcatta 780
atcaatgata tgcctataac aaatgatcag aagaagttaa tgtccaacaa tgttcaaata 840
gttagacagc aaagttactc tatcatgtcc ataataaaan aggaagtctt agcatatgta 900
gtacaattac cactatatgg tgttatagat acaccttgtt ggaaattaca cacatcccct 960
ctatgtacaa ccaacacaaa agaagggtcc aacatctgtt taacaagaac tgacagagga 1020
tggtactgtg acaatgcagg atcagtctct ttcttcccac aagctgaaac atgtaaagtt 1080
caatcgaatc gagtattttg tgacacaatg aacagtttaa cattaccaag tgaagtaaat 1140
ctctgcaatg ttgacatatt caatcccaaa tatgattgta aaattatgac ttcaaaaaca 1200
gatgtaagca gctctgttat cacatctcta ggagccattg tgtcatgcta tggcaaaact 1260
aaatgtacag catccaataa aaatcgtgga atcataaaga cattttctaa cgggtgcgat 1320
tatgtatcaa ataaaggggt ggacactgtg tctgtaggca acacattata ttatgtaaat 1380
aagcaagaag gcaaaagtct ctatgtaaaa ggtgaaccaa taataaattt ctatgaccca 1440
ttagtattcc cctctgntga atttgatgca tcaatatctc aagtcaacga gaagattaac 1500
cagagcctgg catttattcg taaatccgat gaattattac ataatgtaaa tgctggtaaa 1560
tccaccacaa acatcatgat aactgctata attatagtga ttgtagtaat attattatca 1620
ttaattgctg taggactgct cctatactgt aaggccagaa gcacaccagt cacactaagc 1680
aaagatcaac tgagtggtat aaataatatt gcatttagta actaa                 1725

<210> 18
<211> 574
<212> PRT
<213> Respiratory syncytial virus, Merck strain p17

<220> 
<221> SITE           
<222> (294)...(294)
<223> Xaa = Glu or Lys

<220> 
<221> SITE           
<222> (486)...(486)
<223> Xaa = Asp or Gly

<400> 18
Met Glu Leu Pro Ile Leu Lys Ala Asn Ala Ile Thr Thr Ile Leu Thr
 1               5                  10                  15      
Ala Val Thr Phe Cys Phe Ala Ser Ser Gln Asn Ile Thr Glu Glu Phe
            20                  25                  30          
Tyr Gln Ser Thr Cys Ser Ala Val Ser Lys Gly Tyr Leu Ser Ala Leu
        35                  40                  45              
Arg Thr Gly Trp Tyr Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile
    50                  55                  60                  
Lys Glu Asn Lys Cys Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys
65                  70                  75                  80  
Gln Glu Leu Asp Lys Tyr Lys Asn Ala Val Thr Glu Leu Gln Leu Leu
                85                  90                  95      
Met Gln Ser Thr Pro Ala Ala Asn Asn Arg Ala Arg Arg Glu Leu Pro
            100                 105                 110         
Arg Phe Met Asn Tyr Thr Leu Asn Asn Ala Lys Lys Thr Asn Val Thr
        115                 120                 125             
Leu Ser Lys Lys Arg Lys Arg Arg Phe Leu Gly Phe Leu Leu Gly Val
    130                 135                 140                 
Gly Ser Ala Ile Ala Ser Gly Ile Ala Val Ser Lys Val Leu His Leu
145                 150                 155                 160 
Glu Gly Glu Val Asn Lys Ile Lys Ser Ala Leu Leu Ser Thr Asn Lys
                165                 170                 175     
Ala Val Val Ser Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val
            180                 185                 190         
Leu Asp Leu Lys Asn Tyr Ile Asp Lys Gln Leu Leu Pro Ile Val Asn
        195                 200                 205             
Lys Gln Ser Cys Ser Ile Ser Asn Ile Glu Thr Val Ile Glu Phe Gln
    210                 215                 220                 
Gln Lys Asn Asn Arg Leu Leu Glu Ile Thr Arg Glu Phe Ser Val Asn
225                 230                 235                 240 
Ala Gly Val Thr Thr Pro Val Ser Thr Tyr Met Leu Thr Asn Ser Glu
                245                 250                 255     
Leu Leu Ser Leu Ile Asn Asp Met Pro Ile Thr Asn Asp Gln Lys Lys
            260                 265                 270         
Leu Met Ser Asn Asn Val Gln Ile Val Arg Gln Gln Ser Tyr Ser Ile
        275                 280                 285             
Met Ser Ile Ile Lys Xaa Glu Val Leu Ala Tyr Val Val Gln Leu Pro
    290                 295                 300                 
Leu Tyr Gly Val Ile Asp Thr Pro Cys Trp Lys Leu His Thr Ser Pro
305                 310                 315                 320 
Leu Cys Thr Thr Asn Thr Lys Glu Gly Ser Asn Ile Cys Leu Thr Arg
                325                 330                 335     
Thr Asp Arg Gly Trp Tyr Cys Asp Asn Ala Gly Ser Val Ser Phe Phe
            340                 345                 350         
Pro Gln Ala Glu Thr Cys Lys Val Gln Ser Asn Arg Val Phe Cys Asp
        355                 360                 365             
Thr Met Asn Ser Leu Thr Leu Pro Ser Glu Val Asn Leu Cys Asn Val
    370                 375                 380                 
Asp Ile Phe Asn Pro Lys Tyr Asp Cys Lys Ile Met Thr Ser Lys Thr
385                 390                 395                 400 
Asp Val Ser Ser Ser Val Ile Thr Ser Leu Gly Ala Ile Val Ser Cys
                405                 410                 415     
Tyr Gly Lys Thr Lys Cys Thr Ala Ser Asn Lys Asn Arg Gly Ile Ile
            420                 425                 430         
Lys Thr Phe Ser Asn Gly Cys Asp Tyr Val Ser Asn Lys Gly Val Asp
        435                 440                 445             
Thr Val Ser Val Gly Asn Thr Leu Tyr Tyr Val Asn Lys Gln Glu Gly
    450                 455                 460                 
Lys Ser Leu Tyr Val Lys Gly Glu Pro Ile Ile Asn Phe Tyr Asp Pro
465                 470                 475                 480 
Leu Val Phe Pro Ser Xaa Glu Phe Asp Ala Ser Ile Ser Gln Val Asn
                485                 490                 495     
Glu Lys Ile Asn Gln Ser Leu Ala Phe Ile Arg Lys Ser Asp Glu Leu
            500                 505                 510         
Leu His Asn Val Asn Ala Gly Lys Ser Thr Thr Asn Ile Met Ile Thr
        515                 520                 525             
Ala Ile Ile Ile Val Ile Val Val Ile Leu Leu Ser Leu Ile Ala Val
    530                 535                 540                 
Gly Leu Leu Leu Tyr Cys Lys Ala Arg Ser Thr Pro Val Thr Leu Ser
545                 550                 555                 560 
Lys Asp Gln Leu Ser Gly Ile Asn Asn Ile Ala Phe Ser Asn
                565                 570                 


<210> 19
<211> 6498
<212> DNA
<213> Respiratory syncytial virus, S2

<400> 19
atggatccca ttattaatgg aaattctgct aatgtgtatc taaccgatag ttatttaaaa 60
ggtgttattt ctttctcaga atgtaatgct ttaggaagtt acatattcaa tggtccttat 120
ctcaaaaatg attataccaa cttaattagt agacaaaatc cattaataga acacataaat 180
ctaaagaaac taaatataac acagtcctta atatctaagt atcataaagg tgaaataaaa 240
atagaagaac ctacttattt tcagtcatta cttatgacat acaagagtat gacctcgtta 300
gaacagatta ctaccactaa tttacttaaa aagataataa gaagagctat agaaattagt 360
gatgtcaaag tctatgctat attgaataaa ctggggctta aagaaaaaga caagattaaa 420
tccaacaatg gacaagatga agacaactca gttattacaa ccataatcaa agatgatata 480
cttttagctg ttaaggataa tcaatctcat cttaaagcag tcaaaaatca ctctacaaaa 540
caaaaagata caatcaaaac aacactcttg aagaaattaa tgtgttcaat gcaacatcct 600
ccatcatggt taatacattg gtttaattta tacacaaaat taaacaacat attaacacag 660
tatcgatcaa gtgaggtaaa aaaccatggt tttatattga tagacaatca tactctcaat 720
ggattccaat ttattttgaa tcaatatggt tgtatagttt atcataagga actcaaaaga 780
attactgtga caacctataa tcaattcttg acatggaaag atattagcct tagtagatta 840
aatgtttgtt taattacatg gattagtaac tgtttgaaca cattaaataa aagcttaggc 900
ttaagatgcg gattcaataa tgttatcttg acacaactat tcctctatgg agattgtata 960
ctaaaactat tccacaatga ggggttctac ataataaaag aggtagaggg atttattatg 1020
tctctaattt taaatataac agaagaagat caattcagaa aacggtttta taatagtatg 1080
ctcaacaaca tcacagatgc tgctaataaa gctcagaaaa gtctgctatc aagagtatgt 1140
catacattat tagataagac agtatccgat aatataataa atggcagatg gataattcta 1200
ttaagtaagt tccttaaatt aattaagctt gcaggtgaca ataaccttaa caatctgagt 1260
gaattatatt ttttgttcag aatatttgga cacccaatgg tagatgaaag acaagccatg 1320
gatgctgtta aagttaattg caacgagacc aaattttact tgttaagcag tttgagtatg 1380
ttaagaggtg cctttatata tagaattata aaaggatttg taaataatta caacagatgg 1440
cctactttaa ggaatgctat tgttttaccc ttaagatggt taacttacta taaactaaac 1500
acttatcctt ccttgttgga acttacagaa agagatttga ttgttttatc aggactacgt 1560
ttctatcgtg agtttcggtt gcctaaaaaa gtggatcttg aaatgatcat aaatgataag 1620
gctatatcac ctcctaaaaa tttgatatgg actagtttcc ctagaaatta tatgccgtca 1680
cacatacaaa attatataga acatgaaaaa ttaaaatttt ccgagagtga taaatcaaga 1740
agagtattag agtactattt aagagataac aaattcaatg aatgtgattt atacaactgt 1800
gtagttaatc aaagttatct taacaaccct aatcatgtgg tatctttgac aggcaaagaa 1860
agagaactca gtgtaggtag aatgtttgca atgcaaccag gaatgttcag acaagttcaa 1920
atattagcag agaaaatgat agctgaaaac attttacaat tctttcctga aagtcttaca 1980
agatatggtg atctagaact acagaaaata ttagaattga aagcaggaat aagtaacaaa 2040
tcaaatcgtt acaatgataa ttacaacaat tacattagta agtgctctat catcacagat 2100
ctcagcaaat tcaatcaagc atttcgatat gaaacatcat gtatttgtag tgatgtactg 2160
gatgaactgc atggtgtaca atctctattt tcctggttac atttaactat tcctcatgtc 2220
acaataatat gcacatatag gcatgcaccc ccctatataa gagatcatat tgtagatctt 2280
aacaatgtag atgaacaaag tggattatat agatatcata tgggtggtat cgaagggtgg 2340
tgtcaaaaac tatggaccat agaagctata tcactattgg atctaatatc tctcaaaggg 2400
aaattctcaa ttactgcttt aattaatggt gacaatcaat caatagatat aagtaaacca 2460
gtcagactca tggaaggtca aactcatgct caagcagatt atttgctagc attaaatagt 2520
cttaaattac tgtataaaga gtatgcaggc ataggccaca aattaaaagg aactgagact 2580
tatatatcaa gagatatgca atttatgagt aaaacaattc aacataacgg tgtatattac 2640
ccagctagta taaagaaagt cctaagagtg ggaccgtgga taaacactat acttgatgat 2700
ttcaaagtga gtctagaatc tataggtagt ttgacacaag aattagaata tagaggagaa 2760
agtctattat gcagtttaat atttagaaat gtatggttat ataatcaaat tgctttacaa 2820
ctaaaaaatc atgcattatg taacaataaa ttatatttgg acatattaaa ggttctgaaa 2880
cacttaaaaa ccttttttaa tcttgataat attgatacag cattaacatt gtatatgaat 2940
ttgcccatgt tatttggtgg tggtgatccc aacttgttat atcgaagttt ctatagaaga 3000
actcctgatt tcctcacaga ggctatagtt cactctgtgt tcatacttag ttattataca 3060
aaccatgatt taaaagataa acttcaagat ctgtcagatg atagattgaa taagttctta 3120
acatgcataa tcacatttga caaaaaccct aatgctgaat tcgtaacatt gatgagagat 3180
cctcaagctt tagggtctga gagacaagct aaaattacta gcgaaatcaa tagactggca 3240
gttacagagg ttttgagcac agctccaaac aaaatattct ccaaaagtgc acaacactat 3300
accactacag agatagatct aaatgatatt atgcaaaata tagaacctac atatcctcac 3360
gggctaagag ttgtttatga aagtttaccc ttttataaag cagagaaaat agtaaatctt 3420
atatccggta caaaatctat aactaacata ctggaaaaga cttctgccat agacttaaca 3480
gatattgata gagccactga gatgatgagg aaaaacataa ctttgcttat aaggatattt 3540
ccattagatt gtaacagaga taaaagggaa atattgagta tggaaaacct aagtattact 3600
gaattaagca aatatgttag ggaaagatct tggtctttat ccaatatagt tggtgttaca 3660
tcacctagta tcatgtatac aatggacatc aaatatacaa caagcactat agctagtggc 3720
ataatcatag agaaatataa tgttaacagt ttaacacgtg gtgagagagg acccactaaa 3780
ccatgggttg gttcatctac acaagagaaa aaaacaatgc cagtttataa tagacaagtt 3840
ttaaccaaaa aacagagaga tcaaatagat ctattagcaa aattggattg ggtgtatgca 3900
tctatagata acaaggatga attcatggaa gaacttagca taggaactct tgggttaaca 3960
tatgagaaag ccaaaaaatt atttccacaa tatttaagtg ttaactattt gcatcgcctt 4020
acagtcagta gtagaccatg tgaattccct gcatcaatac cagcttatag aactacaaat 4080
tatcactttg atactagccc tattaatcgc atattaacag aaaagtatgg tgatgaagat 4140
attgatatag tattccaaaa ctgtataagc tttggcctta gcttaatgtc agtagtagaa 4200
caatttacta atgtatgtcc taacagaatt attcttatac ctaagcttaa tgagatacat 4260
ttaatgaaac ctcccatatt cacaggtgat gttgatattc acaagttaaa acaagtgata 4320
caaaaacagc atatgttttt accagacaaa ataagtttga ctcaatatgt ggaattattc 4380
ttaagtaata aaacactcaa atctggatct catgttaatt ctaatttaat attggcgcat 4440
aagatatctg actattttca taatacttac attttaagta ctaatttagc tggacattgg 4500
attctgatta tacaacttat gaaagattct aagggtattt ttgaaaaaga ttggggagag 4560
ggatatataa ctgatcatat gttcattaat ttgaaagttt tcttcaatgc ttataagacc 4620
tatctcttgt gttttcataa aggttacggc agagcaaagc tggagtgtga tatgaatact 4680
tcagatctcc tatgtgtatt ggaattaata gacagtagtt attggaagtc tatgtctaag 4740
gtatttttag aacaaaaagt tatcaaatac attcttagcc aggatgcaag tttacataga 4800
gtaaaaggat gtcatagctt caaactatgg tttcttaaac gtcttaatgt agcagaattc 4860
acagtttgcc cttgggttgt taacatagat tatcatccaa cacatatgaa agcaatatta 4920
acttatatag atcttgttag aatgggattg ataaatatag ataaaatata cattaaaaat 4980
aaacacaaat tcaatgatga attttatact tctaatctct tttacattaa ttataacttc 5040
tcagataata ctcatctatt aactaaacat ataaggattg ctaattctga attagaaaat 5100
aattacaaca aattatatca tcctacacca gaaaccctag aaaatatact aaccaatccg 5160
gttaaatgta atgacaaaaa gacactgaat gactattgta taggtaaaaa tgttgactca 5220
ataatgttac cattgttatc taataagaag cttattaaat cgtctacaat gattagaacc 5280
aattacagca aacaagattt gtataattta tttcctacgg ttgtgattga taaaattata 5340
gatcattcag gtaatacagc caaatctaac caactttaca ctactacttc tcatcaaata 5400
cctttagtgc acaatagcac atcactttat tgcatgcttc cttggcatca tattaataga 5460
ttcaattttg tatttagttc tacaggttgt aaaattagta tagagtatat tttaaaagac 5520
cttaaaatta aagatcctaa ttgtatagca ttcataggtg aaggagcagg gaatttatta 5580
ttgcgtacag tagtggaact tcatcctgat ataagatata tttacagaag tctgaaagat 5640
tgcaatgatc atagtttacc tattgagttt ttaaggctgt acaatggaca tatcaacatt 5700
gattatggtg aaaatttgac cattcctgct acagatgcaa ccaacaacat tcattggtct 5760
tatttacata taaagtttgc tgaacctatc agtctttttg tctgtgatgc tgaattgcct 5820
gtaacagtca actggagtaa aattataata gagtggagca agcatgtaag aaaatgcaag 5880
tactgttcct cagttaataa atgtacgtta atagtaaaat atcatgctca agatgatatc 5940
gatttcaaat tagacaatat aactatatta aaaacttatg tatgcttagg cagtaagtta 6000
aaggggtctg aagtttactt agtccttaca ataggtcctg caaatgtgtt cccagtattt 6060
aatgtagtac aaaatgctaa attgatacta tcaagaacca aaaatttcat catgcctaag 6120
aaggctgata aagagtctat tgatgcaaat attaaaagtt tgataccctt tctttgttac 6180
cctataacaa aaaaaggaat taatactgca ttgtcaaaac taaagagtgt tgttagtgga 6240
gatatactat catattctat agcaggacgt aatgaagttt tcagcaataa acttataaat 6300
cataagcata tgaacatctt aaaatggttc aatcatgttt taaatttcag atcaacagaa 6360
ctaaactata atcatttata tatggtagaa tctacatatc cttatctaag tgaattgtta 6420
aacagcttga caactaatga acttaaaaaa ctgattaaaa tcacaggtag tttgttatac 6480
aactttcata atgaataa                                               6498



<210> 20
<211> 2165
<212> PRT
<213> Respiratory syncytial virus, S2

<400> 20
Met Asp Pro Ile Ile Asn Gly Asn Ser Ala Asn Val Tyr Leu Thr Asp
 1               5                  10                  15      
Ser Tyr Leu Lys Gly Val Ile Ser Phe Ser Glu Cys Asn Ala Leu Gly
            20                  25                  30          
Ser Tyr Ile Phe Asn Gly Pro Tyr Leu Lys Asn Asp Tyr Thr Asn Leu
        35                  40                  45              
Ile Ser Arg Gln Asn Pro Leu Ile Glu His Ile Asn Leu Lys Lys Leu
    50                  55                  60                  
Asn Ile Thr Gln Ser Leu Ile Ser Lys Tyr His Lys Gly Glu Ile Lys
65                  70                  75                  80  
Ile Glu Glu Pro Thr Tyr Phe Gln Ser Leu Leu Met Thr Tyr Lys Ser
                85                  90                  95      
Met Thr Ser Leu Glu Gln Ile Thr Thr Thr Asn Leu Leu Lys Lys Ile
            100                 105                 110         
Ile Arg Arg Ala Ile Glu Ile Ser Asp Val Lys Val Tyr Ala Ile Leu
        115                 120                 125             
Asn Lys Leu Gly Leu Lys Glu Lys Asp Lys Ile Lys Ser Asn Asn Gly
    130                 135                 140                 
Gln Asp Glu Asp Asn Ser Val Ile Thr Thr Ile Ile Lys Asp Asp Ile
145                 150                 155                 160 
Leu Leu Ala Val Lys Asp Asn Gln Ser His Leu Lys Ala Val Lys Asn
                165                 170                 175     
His Ser Thr Lys Gln Lys Asp Thr Ile Lys Thr Thr Leu Leu Lys Lys
            180                 185                 190         
Leu Met Cys Ser Met Gln His Pro Pro Ser Trp Leu Ile His Trp Phe
        195                 200                 205             
Asn Leu Tyr Thr Lys Leu Asn Asn Ile Leu Thr Gln Tyr Arg Ser Ser
    210                 215                 220                 
Glu Val Lys Asn His Gly Phe Ile Leu Ile Asp Asn His Thr Leu Asn
225                 230                 235                 240 
Gly Phe Gln Phe Ile Leu Asn Gln Tyr Gly Cys Ile Val Tyr His Lys
                245                 250                 255     
Glu Leu Lys Arg Ile Thr Val Thr Thr Tyr Asn Gln Phe Leu Thr Trp
            260                 265                 270         
Lys Asp Ile Ser Leu Ser Arg Leu Asn Val Cys Leu Ile Thr Trp Ile
        275                 280                 285             
Ser Asn Cys Leu Asn Thr Leu Asn Lys Ser Leu Gly Leu Arg Cys Gly
    290                 295                 300                 
Phe Asn Asn Val Ile Leu Thr Gln Leu Phe Leu Tyr Gly Asp Cys Ile
305                 310                 315                 320 
Leu Lys Leu Phe His Asn Glu Gly Phe Tyr Ile Ile Lys Glu Val Glu
                325                 330                 335     
Gly Phe Ile Met Ser Leu Ile Leu Asn Ile Thr Glu Glu Asp Gln Phe
            340                 345                 350         
Arg Lys Arg Phe Tyr Asn Ser Met Leu Asn Asn Ile Thr Asp Ala Ala
        355                 360                 365             
Asn Lys Ala Gln Lys Ser Leu Leu Ser Arg Val Cys His Thr Leu Leu
    370                 375                 380                 
Asp Lys Thr Val Ser Asp Asn Ile Ile Asn Gly Arg Trp Ile Ile Leu
385                 390                 395                 400 
Leu Ser Lys Phe Leu Lys Leu Ile Lys Leu Ala Gly Asp Asn Asn Leu
                405                 410                 415     
Asn Asn Leu Ser Glu Leu Tyr Phe Leu Phe Arg Ile Phe Gly His Pro
            420                 425                 430         
Met Val Asp Glu Arg Gln Ala Met Asp Ala Val Lys Val Asn Cys Asn
        435                 440                 445             
Glu Thr Lys Phe Tyr Leu Leu Ser Ser Leu Ser Met Leu Arg Gly Ala
    450                 455                 460                 
Phe Ile Tyr Arg Ile Ile Lys Gly Phe Val Asn Asn Tyr Asn Arg Trp
465                 470                 475                 480 
Pro Thr Leu Arg Asn Ala Ile Val Leu Pro Leu Arg Trp Leu Thr Tyr
                485                 490                 495     
Tyr Lys Leu Asn Thr Tyr Pro Ser Leu Leu Glu Leu Thr Glu Arg Asp
            500                 505                 510         
Leu Ile Val Leu Ser Gly Leu Arg Phe Tyr Arg Glu Phe Arg Leu Pro
        515                 520                 525             
Lys Lys Val Asp Leu Glu Met Ile Ile Asn Asp Lys Ala Ile Ser Pro
    530                 535                 540                 
Pro Lys Asn Leu Ile Trp Thr Ser Phe Pro Arg Asn Tyr Met Pro Ser
545                 550                 555                 560 
His Ile Gln Asn Tyr Ile Glu His Glu Lys Leu Lys Phe Ser Glu Ser
                565                 570                 575     
Asp Lys Ser Arg Arg Val Leu Glu Tyr Tyr Leu Arg Asp Asn Lys Phe
            580                 585                 590         
Asn Glu Cys Asp Leu Tyr Asn Cys Val Val Asn Gln Ser Tyr Leu Asn
        595                 600                 605             
Asn Pro Asn His Val Val Ser Leu Thr Gly Lys Glu Arg Glu Leu Ser
    610                 615                 620                 
Val Gly Arg Met Phe Ala Met Gln Pro Gly Met Phe Arg Gln Val Gln
625                 630                 635                 640 
Ile Leu Ala Glu Lys Met Ile Ala Glu Asn Ile Leu Gln Phe Phe Pro
                645                 650                 655     
Glu Ser Leu Thr Arg Tyr Gly Asp Leu Glu Leu Gln Lys Ile Leu Glu
            660                 665                 670         
Leu Lys Ala Gly Ile Ser Asn Lys Ser Asn Arg Tyr Asn Asp Asn Tyr
        675                 680                 685             
Asn Asn Tyr Ile Ser Lys Cys Ser Ile Ile Thr Asp Leu Ser Lys Phe
    690                 695                 700                 
Asn Gln Ala Phe Arg Tyr Glu Thr Ser Cys Ile Cys Ser Asp Val Leu
705                 710                 715                 720 
Asp Glu Leu His Gly Val Gln Ser Leu Phe Ser Trp Leu His Leu Thr
                725                 730                 735     
Ile Pro His Val Thr Ile Ile Cys Thr Tyr Arg His Ala Pro Pro Tyr
            740                 745                 750         
Ile Arg Asp His Ile Val Asp Leu Asn Asn Val Asp Glu Gln Ser Gly
        755                 760                 765             
Leu Tyr Arg Tyr His Met Gly Gly Ile Glu Gly Trp Cys Gln Lys Leu
    770                 775                 780                 
Trp Thr Ile Glu Ala Ile Ser Leu Leu Asp Leu Ile Ser Leu Lys Gly
785                 790                 795                 800 
Lys Phe Ser Ile Thr Ala Leu Ile Asn Gly Asp Asn Gln Ser Ile Asp
                805                 810                 815     
Ile Ser Lys Pro Val Arg Leu Met Glu Gly Gln Thr His Ala Gln Ala
            820                 825                 830         
Asp Tyr Leu Leu Ala Leu Asn Ser Leu Lys Leu Leu Tyr Lys Glu Tyr
        835                 840                 845             
Ala Gly Ile Gly His Lys Leu Lys Gly Thr Glu Thr Tyr Ile Ser Arg
    850                 855                 860                 
Asp Met Gln Phe Met Ser Lys Thr Ile Gln His Asn Gly Val Tyr Tyr
865                 870                 875                 880 
Pro Ala Ser Ile Lys Lys Val Leu Arg Val Gly Pro Trp Ile Asn Thr
                885                 890                 895     
Ile Leu Asp Asp Phe Lys Val Ser Leu Glu Ser Ile Gly Ser Leu Thr
            900                 905                 910         
Gln Glu Leu Glu Tyr Arg Gly Glu Ser Leu Leu Cys Ser Leu Ile Phe
        915                 920                 925             
Arg Asn Val Trp Leu Tyr Asn Gln Ile Ala Leu Gln Leu Lys Asn His
    930                 935                 940                 
Ala Leu Cys Asn Asn Lys Leu Tyr Leu Asp Ile Leu Lys Val Leu Lys
945                 950                 955                 960 
His Leu Lys Thr Phe Phe Asn Leu Asp Asn Ile Asp Thr Ala Leu Thr
                965                 970                 975     
Leu Tyr Met Asn Leu Pro Met Leu Phe Gly Gly Gly Asp Pro Asn Leu
            980                 985                 990         
Leu Tyr Arg Ser Phe Tyr Arg Arg Thr Pro Asp Phe Leu Thr Glu Ala
        995                 1000                1005            
Ile Val His Ser Val Phe Ile Leu Ser Tyr Tyr Thr Asn His Asp Leu
    1010                1015                1020                
Lys Asp Lys Leu Gln Asp Leu Ser Asp Asp Arg Leu Asn Lys Phe Leu
1025                1030                1035               1040 
Thr Cys Ile Ile Thr Phe Asp Lys Asn Pro Asn Ala Glu Phe Val Thr
                1045                1050                1055    
Leu Met Arg Asp Pro Gln Ala Leu Gly Ser Glu Arg Gln Ala Lys Ile
            1060                1065                1070        
Thr Ser Glu Ile Asn Arg Leu Ala Val Thr Glu Val Leu Ser Thr Ala
        1075                1080                1085            
Pro Asn Lys Ile Phe Ser Lys Ser Ala Gln His Tyr Thr Thr Thr Glu
    1090                1095                1100                
Ile Asp Leu Asn Asp Ile Met Gln Asn Ile Glu Pro Thr Tyr Pro His
1105                1110                1115               1120 
Gly Leu Arg Val Val Tyr Glu Ser Leu Pro Phe Tyr Lys Ala Glu Lys
                1125                1130                1135    
Ile Val Asn Leu Ile Ser Gly Thr Lys Ser Ile Thr Asn Ile Leu Glu
            1140                1145                1150        
Lys Thr Ser Ala Ile Asp Leu Thr Asp Ile Asp Arg Ala Thr Glu Met
        1155                1160                1165            
Met Arg Lys Asn Ile Thr Leu Leu Ile Arg Ile Phe Pro Leu Asp Cys
    1170                1175                1180                
Asn Arg Asp Lys Arg Glu Ile Leu Ser Met Glu Asn Leu Ser Ile Thr
1185                1190                1195               1200 
Glu Leu Ser Lys Tyr Val Arg Glu Arg Ser Trp Ser Leu Ser Asn Ile
                1205                1210                1215    
Val Gly Val Thr Ser Pro Ser Ile Met Tyr Thr Met Asp Ile Lys Tyr
            1220                1225                1230        
Thr Thr Ser Thr Ile Ala Ser Gly Ile Ile Ile Glu Lys Tyr Asn Val
        1235                1240                1245            
Asn Ser Leu Thr Arg Gly Glu Arg Gly Pro Thr Lys Pro Trp Val Gly
    1250                1255                1260                
Ser Ser Thr Gln Glu Lys Lys Thr Met Pro Val Tyr Asn Arg Gln Val
1265                1270                1275               1280 
Leu Thr Lys Lys Gln Arg Asp Gln Ile Asp Leu Leu Ala Lys Leu Asp
                1285                1290                1295    
Trp Val Tyr Ala Ser Ile Asp Asn Lys Asp Glu Phe Met Glu Glu Leu
            1300                1305                1310        
Ser Ile Gly Thr Leu Gly Leu Thr Tyr Glu Lys Ala Lys Lys Leu Phe
        1315                1320                1325            
Pro Gln Tyr Leu Ser Val Asn Tyr Leu His Arg Leu Thr Val Ser Ser
    1330                1335                1340                
Arg Pro Cys Glu Phe Pro Ala Ser Ile Pro Ala Tyr Arg Thr Thr Asn
1345                1350                1355               1360 
Tyr His Phe Asp Thr Ser Pro Ile Asn Arg Ile Leu Thr Glu Lys Tyr
                1365                1370                1375    
Gly Asp Glu Asp Ile Asp Ile Val Phe Gln Asn Cys Ile Ser Phe Gly
            1380                1385                1390        
Leu Ser Leu Met Ser Val Val Glu Gln Phe Thr Asn Val Cys Pro Asn
        1395                1400                1405            
Arg Ile Ile Leu Ile Pro Lys Leu Asn Glu Ile His Leu Met Lys Pro
    1410                1415                1420                
Pro Ile Phe Thr Gly Asp Val Asp Ile His Lys Leu Lys Gln Val Ile
1425                1430                1435               1440 
Gln Lys Gln His Met Phe Leu Pro Asp Lys Ile Ser Leu Thr Gln Tyr
                1445                1450                1455    
Val Glu Leu Phe Leu Ser Asn Lys Thr Leu Lys Ser Gly Ser His Val
            1460                1465                1470        
Asn Ser Asn Leu Ile Leu Ala His Lys Ile Ser Asp Tyr Phe His Asn
        1475                1480                1485            
Thr Tyr Ile Leu Ser Thr Asn Leu Ala Gly His Trp Ile Leu Ile Ile
    1490                1495                1500                
Gln Leu Met Lys Asp Ser Lys Gly Ile Phe Glu Lys Asp Trp Gly Glu
1505                1510                1515               1520 
Gly Tyr Ile Thr Asp His Met Phe Ile Asn Leu Lys Val Phe Phe Asn
                1525                1530                1535    
Ala Tyr Lys Thr Tyr Leu Leu Cys Phe His Lys Gly Tyr Gly Arg Ala
            1540                1545                1550        
Lys Leu Glu Cys Asp Met Asn Thr Ser Asp Leu Leu Cys Val Leu Glu
        1555                1560                1565            
Leu Ile Asp Ser Ser Tyr Trp Lys Ser Met Ser Lys Val Phe Leu Glu
    1570                1575                1580                
Gln Lys Val Ile Lys Tyr Ile Leu Ser Gln Asp Ala Ser Leu His Arg
1585                1590                1595               1600 
Val Lys Gly Cys His Ser Phe Lys Leu Trp Phe Leu Lys Arg Leu Asn
                1605                1610                1615    
Val Ala Glu Phe Thr Val Cys Pro Trp Val Val Asn Ile Asp Tyr His
            1620                1625                1630        
Pro Thr His Met Lys Ala Ile Leu Thr Tyr Ile Asp Leu Val Arg Met
        1635                1640                1645            
Gly Leu Ile Asn Ile Asp Lys Ile Tyr Ile Lys Asn Lys His Lys Phe
    1650                1655                1660                
Asn Asp Glu Phe Tyr Thr Ser Asn Leu Phe Tyr Ile Asn Tyr Asn Phe
1665                1670                1675               1680 
Ser Asp Asn Thr His Leu Leu Thr Lys His Ile Arg Ile Ala Asn Ser
                1685                1690                1695    
Glu Leu Glu Asn Asn Tyr Asn Lys Leu Tyr His Pro Thr Pro Glu Thr
            1700                1705                1710        
Leu Glu Asn Ile Leu Thr Asn Pro Val Lys Cys Asn Asp Lys Lys Thr
        1715                1720                1725            
Leu Asn Asp Tyr Cys Ile Gly Lys Asn Val Asp Ser Ile Met Leu Pro
    1730                1735                1740                
Leu Leu Ser Asn Lys Lys Leu Ile Lys Ser Ser Thr Met Ile Arg Thr
1745                1750                1755               1760 
Asn Tyr Ser Lys Gln Asp Leu Tyr Asn Leu Phe Pro Thr Val Val Ile
                1765                1770                1775    
Asp Lys Ile Ile Asp His Ser Gly Asn Thr Ala Lys Ser Asn Gln Leu
            1780                1785                1790        
Tyr Thr Thr Thr Ser His Gln Ile Pro Leu Val His Asn Ser Thr Ser
        1795                1800                1805            
Leu Tyr Cys Met Leu Pro Trp His His Ile Asn Arg Phe Asn Phe Val
    1810                1815                1820                
Phe Ser Ser Thr Gly Cys Lys Ile Ser Ile Glu Tyr Ile Leu Lys Asp
1825                1830                1835               1840 
Leu Lys Ile Lys Asp Pro Asn Cys Ile Ala Phe Ile Gly Glu Gly Ala
                1845                1850                1855    
Gly Asn Leu Leu Leu Arg Thr Val Val Glu Leu His Pro Asp Ile Arg
            1860                1865                1870        
Tyr Ile Tyr Arg Ser Leu Lys Asp Cys Asn Asp His Ser Leu Pro Ile
        1875                1880                1885            
Glu Phe Leu Arg Leu Tyr Asn Gly His Ile Asn Ile Asp Tyr Gly Glu
    1890                1895                1900                
Asn Leu Thr Ile Pro Ala Thr Asp Ala Thr Asn Asn Ile His Trp Ser
1905                1910                1915               1920 
Tyr Leu His Ile Lys Phe Ala Glu Pro Ile Ser Leu Phe Val Cys Asp
                1925                1930                1935    
Ala Glu Leu Pro Val Thr Val Asn Trp Ser Lys Ile Ile Ile Glu Trp
            1940                1945                1950        
Ser Lys His Val Arg Lys Cys Lys Tyr Cys Ser Ser Val Asn Lys Cys
        1955                1960                1965            
Thr Leu Ile Val Lys Tyr His Ala Gln Asp Asp Ile Asp Phe Lys Leu
    1970                1975                1980                
Asp Asn Ile Thr Ile Leu Lys Thr Tyr Val Cys Leu Gly Ser Lys Leu
1985                1990                1995               2000 
Lys Gly Ser Glu Val Tyr Leu Val Leu Thr Ile Gly Pro Ala Asn Val
                2005                2010                2015    
Phe Pro Val Phe Asn Val Val Gln Asn Ala Lys Leu Ile Leu Ser Arg
            2020                2025                2030        
Thr Lys Asn Phe Ile Met Pro Lys Lys Ala Asp Lys Glu Ser Ile Asp
        2035                2040                2045            
Ala Asn Ile Lys Ser Leu Ile Pro Phe Leu Cys Tyr Pro Ile Thr Lys
    2050                2055                2060                
Lys Gly Ile Asn Thr Ala Leu Ser Lys Leu Lys Ser Val Val Ser Gly
2065                2070                2075               2080 
Asp Ile Leu Ser Tyr Ser Ile Ala Gly Arg Asn Glu Val Phe Ser Asn
                2085                2090                2095    
Lys Leu Ile Asn His Lys His Met Asn Ile Leu Lys Trp Phe Asn His
            2100                2105                2110        
Val Leu Asn Phe Arg Ser Thr Glu Leu Asn Tyr Asn His Leu Tyr Met
        2115                2120                2125            
Val Glu Ser Thr Tyr Pro Tyr Leu Ser Glu Leu Leu Asn Ser Leu Thr
    2130                2135                2140                
Thr Asn Glu Leu Lys Lys Leu Ile Lys Ile Thr Gly Ser Leu Leu Tyr
2145                2150                2155               2160 
Asn Phe His Asn Glu
                2165


<210> 21
<211> 6505
<212> DNA
<213> Respiratory syncytial virus, Merck strain 287

<400> 21
atggatccca ttattaatgg aaattctgct aatgtttatc taaccgatag ttatttaaaa 60
ggtgttatct ctttctcaga gtgtaatgct ttaggaagct acatattcaa tggtccttat 120
ctcaaaaatg attataccaa cttaattagt agacaaaatc cattaataga acacatgaat 180
ctaaagaaac taaatataac acagtcctta atatctaagt atcataaagg tgaaataaaa 240
ttagaagaac cgacttattt tcagtcatta cttatgacat acaagagtat gacctcgtca 300
gaacagattg ctaccactaa tttacttaaa aagataataa gaagagctat agaaataagt 360
gatgtcaaag tctatgctat attgaataaa ctagggctta aagaaaagga caagattaaa 420
tccaacaatg gacaagatga agacaattca gttattacga ccataatcaa agatgatata 480
ctttcagctg ttaaagataa tcaatctcat cttaaagcag gcaaaaatca ctctacaaaa 540
caaaaagaca caatcaaaac aacactcctg aagaaattga tgtgttcaat gcaacatcct 600
ccatcatggt taatacattg gtttaactta tacacaaaat taaacaacat attaacacag 660
tatcgatcaa atgaggtaaa aaaccatggg tttacattga tagataatca aactcttagt 720
ggatttcaat ttattttgaa ccaatatggt tgtatagttt ataataagga actcaaaaga 780
attactgtga caacctataa tcaattcttg acatggaaag atattagcct tagtagatta 840
aatgtttgtt taattacatg gattagtaac tgcttgaaca cattaaataa aagcttaggc 900
ttaagatgcg gattcaataa tgttatctta acacaactat tcctttatgg agattgtata 960
ctaaaactat ttcacaatga ggggttctac ataataaaag aggtagaggg atttattatg 1020
tctctaattt taaatataac agaagaagat caattcagaa aacgatttta taatagtatg 1080
ctcaacaaca tcacagatgc tgctaataaa gctcagaaaa atctgctatc aagagtatgt 1140
catacattat tagataagac agtatccgat aatataataa atggcagatg gataattcta 1200
ttaagtaagt tccttaaatt aattaagctt gcgggtgaca ataaccttaa caatctgagt 1260
gaactatatt ttttgttcag aatatttgga cacccaatgg tagatgaaag acaagccatg 1320
gatgctgtta aaattaattg caatgagacc aaattttact tgctaagcag tctaagtatg 1380
ttaagaggtg cctttatata tagaattata aaagggtttg taaataatta caacagatgg 1440
cctactttaa gaaatgctat tgttttaccc ttaagatggt taacttacta taaactaaac 1500
acttatcctt ctttgttgga acttacagaa agagatttga ttgtgttatc aggactacgt 1560
ttctatcgtg agtttcggtt gcctaaaaaa gtggatcttg aaatgattat aaatgataaa 1620
gctatatcac ctcctaaaaa tttgatatgg actagtttcc ctagaaatta catgccatca 1680
cacatacaaa actatataga acatgaaaaa ttaaaatttt ccgagagtga taaatcaaga 1740
agagtattag agtattattt aagagataac aagttcaatg aatgtgattt atacaactgt 1800
gtagttgatc aaagttatct aaacaaccct aatcatgtgg tatcattgac aggcaaagaa 1860
agagaactca gtgtaggtag aatgtttgca atgcaaccgg gaatgttcag acaggttcaa 1920
atattagcag agaaaatgat agctgaaaac attttacaat tctttcctga aagtcttaca 1980
agatatggtg atctagaact acaaaaaata ttagaattga aagcaggaat aagtaacaaa 2040
tcaaatcgct acaatgacaa ttacaacaat tacattagta agtgctctat catcacagat 2100
ctcagcaaat tcaatcaagc atttcgatat gaaacgtcat gtatttgtag tgatgtgctt 2160
gatgaactgc atggtgtaca atctctattt tcctggttac atttaactat tcctcatgtt 2220
acaataatat gtacatatag gcatgcaccc ccctatatag gagatcatat tgtagatctt 2280
aacaatgtag atgaacaaag tggattatat agatatcaca tgggtggcat cgaagggtgg 2340
tgtcaaaaac tatggaccat agaagctata tcactattgg atctaatatc tctcaaaggg 2400
aaattctcaa ttactgcttt aattaatggt gacaatcaat caatagatat aagcaaacca 2460
attagactca tggaaggtca aactcatgct caagcagatt atttgctagc attaaatagc 2520
cttaaattac tgtataaaga gtatgcaggc ataggccaca aattaaaagg aactgagact 2580
tatatatcac gagatatgca atttatgagt aaaacaattc aacataacgg tgtgtattac 2640
ccagctagta taaagaaagt cctaagagtg ggaccgtgga taaacactat acttgatgat 2700
ttcaaagtga gtttagaatc tataggtagt ttgacacaag aattagaata tagaggtgaa 2760
agtctattat gcagtttaat atttagaaat gtatggttat ataatcagat tgctctacaa 2820
ttaaaaaatc atgcattatg taacaataaa ctatatttgg acatattaaa ggttctgaaa 2880
cacttaaaaa ccttttttaa tcttgataat attgatacag cattaacatt gtatatgaat 2940
ttacctatgt tatttggtgg tggtgatccc aacttgttat atcgaagttt ctatagaaga 3000
acccccgact tcctcacaga ggctatagtt cactctgtgt tcatacttag ttattataca 3060
aaccatgact taaaagataa acttcaagat ctgtcagatg atagattgaa taagttctta 3120
acatgcataa tcacgtttga caaaaaccct aacgctgaat tcgtaacatt gatgagagat 3180
cctcaagctt tagggtctga gagacaagct aaaattacta gcgaaatcaa taggctggca 3240
gttacagagg ttttgagtac agctccaaac aaaatattct ccaaaagtgc acaacattat 3300
accactacag agatagatct aaatgatatt atgcaaaata tagaacctac atatcctcat 3360
gggctaagag ttgtttatga aagtttaccc ttttataaag cagagaaaat agtaaatctt 3420
atatcaggta caaaatctat aactaacata ctggaaaaaa cttctgccat agacttaaca 3480
gatattgata gagccactga gatgatgagg aaaaacataa ctttgcttat aaggatactt 3540
ccattggatt gtaacagaga taaaagagag atattgagta tggaaaacct aagtattact 3600
gaattaagca aatatgttag ggaaagatct tggtctttat tcaatatagt tggtgttaca 3660
tcacccagta tcatgtatac aatggacatc aaatatacta caagcactat agctagtggc 3720
ataattatag agaaatataa tgttaacagt ttaacacgtg gtgagagagg acccactaaa 3780
ccatgggttg gttcatctac acaagagaaa aaaacaatgc cagtttataa tagacaagtc 3840
ttaaccaaaa aacagagaga tcaaatagat ctattagcaa aattggattg ggtgtatgca 3900
tctatagata acaaggatga attcatggaa gaactcagca taggaaccct tgggttaaca 3960
tatgaaaaag ccaagaaatt atttccacaa tatttaagtg tcaactattt gcatcgactt 4020
acagtcagta gtagaccatg tgaattccct gcatcaatac cagcttatag aacaacaaat 4080
tatcactttg acactagccc tattaatcgc atattaacag aaaagtatgg tgatgaagat 4140
attgacatag tattccaaaa ctgtataagc tttggcctta gcttaatgtc agtagtagaa 4200
caatttacta atgtatgtcc taacagaatt attctcatac ctaagcttaa tgagatacat 4260
ttgatgaaac ctcccatatt cacaggtgat gttgatattc acaagttaaa acaagtgata 4320
caaaaacagc atatgttttt accagacaaa ataagtttga ctcaatatgt agaattattc 4380
ttaagtaata aaacactcaa atctggatct catgttaatt ctaatttaat attggcacat 4440
aaaatatctg actattttca taatacttac attttaagta ctaatttagc tggacattgg 4500
attctgatta tacaacttat gaaagattct aagggtattt ttgaaaaaga ttggggagag 4560
ggatatataa ctgatcatat gtttattaat ttgaaagttt tcttcaatgc ctataagacc 4620
tatctcttgt gttttcataa aggttatggc aaagcaaagc tggagtgtga tatgaacacc 4680
tcagatctcc tatgtgtatt ggaattaata gacagtagtt attggaaatc tatgtctaag 4740
gtatttttag aacaaaaagt tatcaaatac attcttagcc aagatgcaag tttacataga 4800
gtaaaaggat gtcatagctt caaattatgg tttcttaaac gtcttaatgt agcagaattc 4860
acagtttgcc cttgggttgt taacatagat tatcatccaa cacatatgaa agcaatatta 4920
acttatatag atcttgttag aatgggattg ataaatatag atagaataca cattaaaaat 4980
aaacacaaat tcaatgatga attttatact tctaatctct tctacattaa ttataacttc 5040
tcagataata ctcatctatt aactaaacat ataaggattg ctaattctga attagaaaat 5100
aattacaaca aattatatca tcctacacca gaaaccctag agaatatact agccaatccg 5160
attaaaagta atgacaaaaa gacactgaat gaatattgta taggtaaaaa tgttgactca 5220
ataatgttac cattgttatc taataagaag cttattaaat cgtctgcaat gattagaacc 5280
aattacagca aacaagattt gtataattta ttccctatgg ttgtgattga tagaattata 5340
gatcattcag gcaatacagc caaatccaac caactttaca ctactacttc ccaccaaata 5400
tctttagtgc acaatagcac atcactttac tgcatgcttc cttggcatca tattaataga 5460
ttcaattttg tatttagttc tacaggttgt aaaattagta tagagtatat tttaaaagat 5520
cttaaaatta aagatcccaa ttgtatagca ttcataggtg aaggagcagg gaatttatta 5580
ttgcgtacag tagtggaact tcatcctgac ataagatata tttacagaag tctgaaagat 5640
tgcaatgatc atagtttacc tattgagttt ttaaggctgt acaatggaca tatcaacatt 5700
gattatggtg aaaatttgac cattcctgct acagatgcaa ccaacaacat tcattggtct 5760
tatttacata taaagtttgc tgaacctatc agtctttttg tctgtgatgc tgaattgcct 5820
gtaacagtca attggagtaa aattataata gaatggagca agcatgtaag aaagtgcaag 5880
tactgttcct cagttaataa atgtatgtta atagtaaaat atcatgctca agatgatatt 5940
gatttcaaat tagacaatat aactatatta aaaacttatg tatgcttagg cagtaagtta 6000
aagggatcgg aggtttactt agtcatcaca ataggtcctg caaatatatt cccagcattt 6060
aatgtagtac aaaatgctaa attgatacta tcaagaacca aaaatttcat catgcctaag 6120
aaagctgata aagagtctat tgatgcaaat attaaaagtt tgataccctt tctttgttac 6180
cctataacaa aaaaaggaat taatactgca ttgtcaaaac taaagagtgt tgttagtgga 6240
gatatactat catattctat agctggacgt aatgaagttt tcagcaataa acttataaat 6300
cataaacata tgaacatctt aaaatggttc aatcatgttt taaatttcag atcaacagaa 6360
ttaaactata accatttata tatggtagaa tctacatatc cttacctaag tgaattgtta 6420
aacagcttga caaccaatga acttaaaaaa ctgattaaaa tcacaggtag tctgttatac 6480
aactttcata atgaataatg aataa                                       6505



<210> 22
<211> 2166
<212> PRT
<213> Respiratory syncytial virus, Merck strain 287

<400> 22
Met Asp Pro Ile Ile Asn Gly Asn Ser Ala Asn Val Tyr Leu Thr Asp
 1               5                  10                  15      
Ser Tyr Leu Lys Gly Val Ile Ser Phe Ser Glu Cys Asn Ala Leu Gly
            20                  25                  30          
Ser Tyr Ile Phe Asn Gly Pro Tyr Leu Lys Asn Asp Tyr Thr Asn Leu
        35                  40                  45              
Ile Ser Arg Gln Asn Pro Leu Ile Glu His Met Asn Leu Lys Lys Leu
    50                  55                  60                  
Asn Ile Thr Gln Ser Leu Ile Ser Lys Tyr His Lys Gly Glu Ile Lys
65                  70                  75                  80  
Leu Glu Glu Pro Thr Tyr Phe Gln Ser Leu Leu Met Thr Tyr Lys Ser
                85                  90                  95      
Met Thr Ser Ser Glu Gln Ile Ala Thr Thr Asn Leu Leu Lys Lys Ile
            100                 105                 110         
Ile Arg Arg Ala Ile Glu Ile Ser Asp Val Lys Val Tyr Ala Ile Leu
        115                 120                 125             
Asn Lys Leu Gly Leu Lys Glu Lys Asp Lys Ile Lys Ser Asn Asn Gly
    130                 135                 140                 
Gln Asp Glu Asp Asn Ser Val Ile Thr Thr Ile Ile Lys Asp Asp Ile
145                 150                 155                 160 
Leu Ser Ala Val Lys Asp Asn Gln Ser His Leu Lys Ala Gly Lys Asn
                165                 170                 175     
His Ser Thr Lys Gln Lys Asp Thr Ile Lys Thr Thr Leu Leu Lys Lys
            180                 185                 190         
Leu Met Cys Ser Met Gln His Pro Pro Ser Trp Leu Ile His Trp Phe
        195                 200                 205             
Asn Leu Tyr Thr Lys Leu Asn Asn Ile Leu Thr Gln Tyr Arg Ser Asn
    210                 215                 220                 
Glu Val Lys Asn His Gly Phe Thr Leu Ile Asp Asn Gln Thr Leu Ser
225                 230                 235                 240 
Gly Phe Gln Phe Ile Leu Asn Gln Tyr Gly Cys Ile Val Tyr Asn Lys
                245                 250                 255     
Glu Leu Lys Arg Ile Thr Val Thr Thr Tyr Asn Gln Phe Leu Thr Trp
            260                 265                 270         
Lys Asp Ile Ser Leu Ser Arg Leu Asn Val Cys Leu Ile Thr Trp Ile
        275                 280                 285             
Ser Asn Cys Leu Asn Thr Leu Asn Lys Ser Leu Gly Leu Arg Cys Gly
    290                 295                 300                 
Phe Asn Asn Val Ile Leu Thr Gln Leu Phe Leu Tyr Gly Asp Cys Ile
305                 310                 315                 320 
Leu Lys Leu Phe His Asn Glu Gly Phe Tyr Ile Ile Lys Glu Val Glu
                325                 330                 335     
Gly Phe Ile Met Ser Leu Ile Leu Asn Ile Thr Glu Glu Asp Gln Phe
            340                 345                 350         
Arg Lys Arg Phe Tyr Asn Ser Met Leu Asn Asn Ile Thr Asp Ala Ala
        355                 360                 365             
Asn Lys Ala Gln Lys Asn Leu Leu Ser Arg Val Cys His Thr Leu Leu
    370                 375                 380                 
Asp Lys Thr Val Ser Asp Asn Ile Ile Asn Gly Arg Trp Ile Ile Leu
385                 390                 395                 400 
Leu Ser Lys Phe Leu Lys Leu Ile Lys Leu Ala Gly Asp Asn Asn Leu
                405                 410                 415     
Asn Asn Leu Ser Glu Leu Tyr Phe Leu Phe Arg Ile Phe Gly His Pro
            420                 425                 430         
Met Val Asp Glu Arg Gln Ala Met Asp Ala Val Lys Ile Asn Cys Asn
        435                 440                 445             
Glu Thr Lys Phe Tyr Leu Leu Ser Ser Leu Ser Met Leu Arg Gly Ala
    450                 455                 460                 
Phe Ile Tyr Arg Ile Ile Lys Gly Phe Val Asn Asn Tyr Asn Arg Trp
465                 470                 475                 480 
Pro Thr Leu Arg Asn Ala Ile Val Leu Pro Leu Arg Trp Leu Thr Tyr
                485                 490                 495     
Tyr Lys Leu Asn Thr Tyr Pro Ser Leu Leu Glu Leu Thr Glu Arg Asp
            500                 505                 510         
Leu Ile Val Leu Ser Gly Leu Arg Phe Tyr Arg Glu Phe Arg Leu Pro
        515                 520                 525             
Lys Lys Val Asp Leu Glu Met Ile Ile Asn Asp Lys Ala Ile Ser Pro
    530                 535                 540                 
Pro Lys Asn Leu Ile Trp Thr Ser Phe Pro Arg Asn Tyr Met Pro Ser
545                 550                 555                 560 
His Ile Gln Asn Tyr Ile Glu His Glu Lys Leu Lys Phe Ser Glu Ser
                565                 570                 575     
Asp Lys Ser Arg Arg Val Leu Glu Tyr Tyr Leu Arg Asp Asn Lys Phe
            580                 585                 590         
Asn Glu Cys Asp Leu Tyr Asn Cys Val Val Asp Gln Ser Tyr Leu Asn
        595                 600                 605             
Asn Pro Asn His Val Val Ser Leu Thr Gly Lys Glu Arg Glu Leu Ser
    610                 615                 620                 
Val Gly Arg Met Phe Ala Met Gln Pro Gly Met Phe Arg Gln Val Gln
625                 630                 635                 640 
Ile Leu Ala Glu Lys Met Ile Ala Glu Asn Ile Leu Gln Phe Phe Pro
                645                 650                 655     
Glu Ser Leu Thr Arg Tyr Gly Asp Leu Glu Leu Gln Lys Ile Leu Glu
            660                 665                 670         
Leu Lys Ala Gly Ile Ser Asn Lys Ser Asn Arg Tyr Asn Asp Asn Tyr
        675                 680                 685             
Asn Asn Tyr Ile Ser Lys Cys Ser Ile Ile Thr Asp Leu Ser Lys Phe
    690                 695                 700                 
Asn Gln Ala Phe Arg Tyr Glu Thr Ser Cys Ile Cys Ser Asp Val Leu
705                 710                 715                 720 
Asp Glu Leu His Gly Val Gln Ser Leu Phe Ser Trp Leu His Leu Thr
                725                 730                 735     
Ile Pro His Val Thr Ile Ile Cys Thr Tyr Arg His Ala Pro Pro Tyr
            740                 745                 750         
Ile Gly Asp His Ile Val Asp Leu Asn Asn Val Asp Glu Gln Ser Gly
        755                 760                 765             
Leu Tyr Arg Tyr His Met Gly Gly Ile Glu Gly Trp Cys Gln Lys Leu
    770                 775                 780                 
Trp Thr Ile Glu Ala Ile Ser Leu Leu Asp Leu Ile Ser Leu Lys Gly
785                 790                 795                 800 
Lys Phe Ser Ile Thr Ala Leu Ile Asn Gly Asp Asn Gln Ser Ile Asp
                805                 810                 815     
Ile Ser Lys Pro Ile Arg Leu Met Glu Gly Gln Thr His Ala Gln Ala
            820                 825                 830         
Asp Tyr Leu Leu Ala Leu Asn Ser Leu Lys Leu Leu Tyr Lys Glu Tyr
        835                 840                 845             
Ala Gly Ile Gly His Lys Leu Lys Gly Thr Glu Thr Tyr Ile Ser Arg
    850                 855                 860                 
Asp Met Gln Phe Met Ser Lys Thr Ile Gln His Asn Gly Val Tyr Tyr
865                 870                 875                 880 
Pro Ala Ser Ile Lys Lys Val Leu Arg Val Gly Pro Trp Ile Asn Thr
                885                 890                 895     
Ile Leu Asp Asp Phe Lys Val Ser Leu Glu Ser Ile Gly Ser Leu Thr
            900                 905                 910         
Gln Glu Leu Glu Tyr Arg Gly Glu Ser Leu Leu Cys Ser Leu Ile Phe
        915                 920                 925             
Arg Asn Val Trp Leu Tyr Asn Gln Ile Ala Leu Gln Leu Lys Asn His
    930                 935                 940                 
Ala Leu Cys Asn Asn Lys Leu Tyr Leu Asp Ile Leu Lys Val Leu Lys
945                 950                 955                 960 
His Leu Lys Thr Phe Phe Asn Leu Asp Asn Ile Asp Thr Ala Leu Thr
                965                 970                 975     
Leu Tyr Met Asn Leu Pro Met Leu Phe Gly Gly Gly Asp Pro Asn Leu
            980                 985                 990         
Leu Tyr Arg Ser Phe Tyr Arg Arg Thr Pro Asp Phe Leu Thr Glu Ala
        995                 1000                1005            
Ile Val His Ser Val Phe Ile Leu Ser Tyr Tyr Thr Asn His Asp Leu
    1010                1015                1020                
Lys Asp Lys Leu Gln Asp Leu Ser Asp Asp Arg Leu Asn Lys Phe Leu
1025                1030                1035               1040 
Thr Cys Ile Ile Thr Phe Asp Lys Asn Pro Asn Ala Glu Phe Val Thr
                1045                1050                1055    
Leu Met Arg Asp Pro Gln Ala Leu Gly Ser Glu Arg Gln Ala Lys Ile
            1060                1065                1070        
Thr Ser Glu Ile Asn Arg Leu Ala Val Thr Glu Val Leu Ser Thr Ala
        1075                1080                1085            
Pro Asn Lys Ile Phe Ser Lys Ser Ala Gln His Tyr Thr Thr Thr Glu
    1090                1095                1100                
Ile Asp Leu Asn Asp Ile Met Gln Asn Ile Glu Pro Thr Tyr Pro His
1105                1110                1115               1120 
Gly Leu Arg Val Val Tyr Glu Ser Leu Pro Phe Tyr Lys Ala Glu Lys
                1125                1130                1135    
Ile Val Asn Leu Ile Ser Gly Thr Lys Ser Ile Thr Asn Ile Leu Glu
            1140                1145                1150        
Lys Thr Ser Ala Ile Asp Leu Thr Asp Ile Asp Arg Ala Thr Glu Met
        1155                1160                1165            
Met Arg Lys Asn Ile Thr Leu Leu Ile Arg Ile Leu Pro Leu Asp Cys
    1170                1175                1180                
Asn Arg Asp Lys Arg Glu Ile Leu Ser Met Glu Asn Leu Ser Ile Thr
1185                1190                1195               1200 
Glu Leu Ser Lys Tyr Val Arg Glu Arg Ser Trp Ser Leu Phe Asn Ile
                1205                1210                1215    
Val Gly Val Thr Ser Pro Ser Ile Met Tyr Thr Met Asp Ile Lys Tyr
            1220                1225                1230        
Thr Thr Ser Thr Ile Ala Ser Gly Ile Ile Ile Glu Lys Tyr Asn Val
        1235                1240                1245            
Asn Ser Leu Thr Arg Gly Glu Arg Gly Pro Thr Lys Pro Trp Val Gly
    1250                1255                1260                
Ser Ser Thr Gln Glu Lys Lys Thr Met Pro Val Tyr Asn Arg Gln Val
1265                1270                1275               1280 
Leu Thr Lys Lys Gln Arg Asp Gln Ile Asp Leu Leu Ala Lys Leu Asp
                1285                1290                1295    
Trp Val Tyr Ala Ser Ile Asp Asn Lys Asp Glu Phe Met Glu Glu Leu
            1300                1305                1310        
Ser Ile Gly Thr Leu Gly Leu Thr Tyr Glu Lys Ala Lys Lys Leu Phe
        1315                1320                1325            
Pro Gln Tyr Leu Ser Val Asn Tyr Leu His Arg Leu Thr Val Ser Ser
    1330                1335                1340                
Arg Pro Cys Glu Phe Pro Ala Ser Ile Pro Ala Tyr Arg Thr Thr Asn
1345                1350                1355               1360 
Tyr His Phe Asp Thr Ser Pro Ile Asn Arg Ile Leu Thr Glu Lys Tyr
                1365                1370                1375    
Gly Asp Glu Asp Ile Asp Ile Val Phe Gln Asn Cys Ile Ser Phe Gly
            1380                1385                1390        
Leu Ser Leu Met Ser Val Val Glu Gln Phe Thr Asn Val Cys Pro Asn
        1395                1400                1405            
Arg Ile Ile Leu Ile Pro Lys Leu Asn Glu Ile His Leu Met Lys Pro
    1410                1415                1420                
Pro Ile Phe Thr Gly Asp Val Asp Ile His Lys Leu Lys Gln Val Ile
1425                1430                1435               1440 
Gln Lys Gln His Met Phe Leu Pro Asp Lys Ile Ser Leu Thr Gln Tyr
                1445                1450                1455    
Val Glu Leu Phe Leu Ser Asn Lys Thr Leu Lys Ser Gly Ser His Val
            1460                1465                1470        
Asn Ser Asn Leu Ile Leu Ala His Lys Ile Ser Asp Tyr Phe His Asn
        1475                1480                1485            
Thr Tyr Ile Leu Ser Thr Asn Leu Ala Gly His Trp Ile Leu Ile Ile
    1490                1495                1500                
Gln Leu Met Lys Asp Ser Lys Gly Ile Phe Glu Lys Asp Trp Gly Glu
1505                1510                1515               1520 
Gly Tyr Ile Thr Asp His Met Phe Ile Asn Leu Lys Val Phe Phe Asn
                1525                1530                1535    
Ala Tyr Lys Thr Tyr Leu Leu Cys Phe His Lys Gly Tyr Gly Lys Ala
            1540                1545                1550        
Lys Leu Glu Cys Asp Met Asn Thr Ser Asp Leu Leu Cys Val Leu Glu
        1555                1560                1565            
Leu Ile Asp Ser Ser Tyr Trp Lys Ser Met Ser Lys Val Phe Leu Glu
    1570                1575                1580                
Gln Lys Val Ile Lys Tyr Ile Leu Ser Gln Asp Ala Ser Leu His Arg
1585                1590                1595               1600 
Val Lys Gly Cys His Ser Phe Lys Leu Trp Phe Leu Lys Arg Leu Asn
                1605                1610                1615    
Val Ala Glu Phe Thr Val Cys Pro Trp Val Val Asn Ile Asp Tyr His
            1620                1625                1630        
Pro Thr His Met Lys Ala Ile Leu Thr Tyr Ile Asp Leu Val Arg Met
        1635                1640                1645            
Gly Leu Ile Asn Ile Asp Arg Ile His Ile Lys Asn Lys His Lys Phe
    1650                1655                1660                
Asn Asp Glu Phe Tyr Thr Ser Asn Leu Phe Tyr Ile Asn Tyr Asn Phe
1665                1670                1675               1680 
Ser Asp Asn Thr His Leu Leu Thr Lys His Ile Arg Ile Ala Asn Ser
                1685                1690                1695    
Glu Leu Glu Asn Asn Tyr Asn Lys Leu Tyr His Pro Thr Pro Glu Thr
            1700                1705                1710        
Leu Glu Asn Ile Leu Ala Asn Pro Ile Lys Ser Asn Asp Lys Lys Thr
        1715                1720                1725            
Leu Asn Glu Tyr Cys Ile Gly Lys Asn Val Asp Ser Ile Met Leu Pro
    1730                1735                1740                
Leu Leu Ser Asn Lys Lys Leu Ile Lys Ser Ser Ala Met Ile Arg Thr
1745                1750                1755               1760 
Asn Tyr Ser Lys Gln Asp Leu Tyr Asn Leu Phe Pro Met Val Val Ile
                1765                1770                1775    
Asp Arg Ile Ile Asp His Ser Gly Asn Thr Ala Lys Ser Asn Gln Leu
            1780                1785                1790        
Tyr Thr Thr Thr Ser His Gln Ile Ser Leu Val His Asn Ser Thr Ser
        1795                1800                1805            
Leu Tyr Cys Met Leu Pro Trp His His Ile Asn Arg Phe Asn Phe Val
    1810                1815                1820                
Phe Ser Ser Thr Gly Cys Lys Ile Ser Ile Glu Tyr Ile Leu Lys Asp
1825                1830                1835               1840 
Leu Lys Ile Lys Asp Pro Asn Cys Ile Ala Phe Ile Gly Glu Gly Ala
                1845                1850                1855    
Gly Asn Leu Leu Leu Arg Thr Val Val Glu Leu His Pro Asp Ile Arg
            1860                1865                1870        
Tyr Ile Tyr Arg Ser Leu Lys Asp Cys Asn Asp His Ser Leu Pro Ile
        1875                1880                1885            
Glu Phe Leu Arg Leu Tyr Asn Gly His Ile Asn Ile Asp Tyr Gly Glu
    1890                1895                1900                
Asn Leu Thr Ile Pro Ala Thr Asp Ala Thr Asn Asn Ile His Trp Ser
1905                1910                1915               1920 
Tyr Leu His Ile Lys Phe Ala Glu Pro Ile Ser Leu Phe Val Cys Asp
                1925                1930                1935    
Ala Glu Leu Pro Val Thr Val Asn Trp Ser Lys Ile Ile Ile Glu Trp
            1940                1945                1950        
Ser Lys His Val Arg Lys Cys Lys Tyr Cys Ser Ser Val Asn Lys Cys
        1955                1960                1965            
Met Leu Ile Val Lys Tyr His Ala Gln Asp Asp Ile Asp Phe Lys Leu
    1970                1975                1980                
Asp Asn Ile Thr Ile Leu Lys Thr Tyr Val Cys Leu Gly Ser Lys Leu
1985                1990                1995               2000 
Lys Gly Ser Glu Val Tyr Leu Val Ile Thr Ile Gly Pro Ala Asn Ile
                2005                2010                2015    
Phe Pro Ala Phe Asn Val Val Gln Asn Ala Lys Leu Ile Leu Ser Arg
            2020                2025                2030        
Thr Lys Asn Phe Ile Met Pro Lys Lys Ala Asp Lys Glu Ser Ile Asp
        2035                2040                2045            
Ala Asn Ile Lys Ser Leu Ile Pro Phe Leu Cys Tyr Pro Ile Thr Lys
    2050                2055                2060                
Lys Gly Ile Asn Thr Ala Leu Ser Lys Leu Lys Ser Val Val Ser Gly
2065                2070                2075               2080 
Asp Ile Leu Ser Tyr Ser Ile Ala Gly Arg Asn Glu Val Phe Ser Asn
                2085                2090                2095    
Lys Leu Ile Asn His Lys His Met Asn Ile Leu Lys Trp Phe Asn His
            2100                2105                2110        
Val Leu Asn Phe Arg Ser Thr Glu Leu Asn Tyr Asn His Leu Tyr Met
        2115                2120                2125            
Val Glu Ser Thr Tyr Pro Tyr Leu Ser Glu Leu Leu Asn Ser Leu Thr
    2130                2135                2140                
Thr Asn Glu Leu Lys Lys Leu Ile Lys Ile Thr Gly Ser Leu Leu Tyr
2145                2150                2155               2160 
Asn Phe His Asn Glu Ile
                2165    


<210> 23
<211> 6505
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17

<220> 
<221> variation      
<222> (443)...(443)
<223> n = a or c

<220> 
<221> variation      
<222> (6162)...(6162)
<223> n = g or t

<400> 23
atggatccca ttattaatgg aaattctgct aatgtttatc taaccgatag ttatttaaaa 60
ggtgttatct ctttctcaga gtgtaatgct ttaggaagct acatattcaa tggtccttat 120
ctcaaaaatg attataccaa cttaattagt agacaaaatc cattaataga acacatgaat 180
ctaaagaaac taaatataac acagtcctta atatctaagt atcataaagg tgaaataaaa 240
ttagaagaac cgacttattt tcagtcatta cttatgacat acaagagtat gacctcgtca 300
gaacagattg ctaccactaa tttacttaaa aagataataa gaagagctat agaaataagt 360
gatgtcaaag tctatgctat attgaataaa ctagggctta aagaaaagga caagattaaa 420
tccaacaatg gacaagatga agncaattca gttattacga ccataatcaa agatgatata 480
ctttcagctg ttaaagataa tcaatctcat cttaaagcag gcaaaaatca ctctacaaaa 540
caaaaagaca caatcaaaac aacactcctg aagaaattga tgtgttcaat gcaacatcct 600
ccatcatggt taatacattg gtttaactta tacacaaaat taaacaacat attaacacag 660
tatcgatcaa atgaggtaaa aaaccatggg tttacattga tagataatca aactcttagt 720
ggatttcaat ttattttgaa ccaatatggt tgtatagttt ataataagga actcaaaaga 780
attactgtga caacctataa tcaattcttg acatggaaag atattagcct tagtagatta 840
aatgtttgtt taattacatg gattagtaac tgcttgaaca cattaaataa aagcttaggc 900
ttaagatgcg gattcaataa tgttatctta acacaactat tcctttatgg agattgtata 960
ctaaaactat ttcacaatga ggggttctac ataataaaag aggtagaggg atttattatg 1020
tctctaattt taaatataac agaagaagat caattcagaa aacgatttta taatagtatg 1080
ctcaacaaca tcacagatgc tgctaataaa gctcagaaaa atctgctatc aagagtatgt 1140
catacattat tagataagac agtatccgat aatataataa atggcagatg gataattcta 1200
ttaagtaagt tccttaaatt aattaagctt gcgggtgaca ataaccttaa caatctgagt 1260
gaactatatt ttttgttcag aatatttgga cacccaatgg tagatgaaag acaagccatg 1320
gatgctgtta aaattaattg caatgagacc aaattttact tgctaagcag tctaagtatg 1380
ttaagaggtg cctttatata tagaattata aaagggtttg taaataatta caacagatgg 1440
cctactttaa gaaatgctat tgttttaccc ttaagatggt taacttacta taaactaaac 1500
acttatcctt ctttgttgga acttacagaa agagatttga ttgtgttatc aggactacgt 1560
ttctatcgtg agtttcggtt gcctaaaaaa gtggatcttg aaatgattat aaatgataaa 1620
gctatatcac ctcctaaaaa tttgatatgg actagtttcc ctagaaatta catgccatca 1680
cacatacaaa actatataga acatgaaaaa ttaaaatttt ccgagagtga taaatcaaga 1740
agagtattag agtattattt aagagataac aagttcaatg aatgtgattt atacaactgt 1800
gtagttgatc aaagttatct aaacaaccct aatcatgtgg tatcattgac aggcaaagaa 1860
agagaactca gtgtaggtag aatgtttgca atgcaaccgg gaatgttcag acaggttcaa 1920
atattagcag agaaaatgat agctgaaaac attttacaat tctttcctga aagtcttaca 1980
agatatggtg atctagaact acaaaaaata ttagaattga aagcaggaat aagtaacaaa 2040
tcaaatcgct acaatgacaa ttacaacaat tacattagta agtgctctat catcacagat 2100
ctcagcaaat tcaatcaagc atttcgatat gaaacgtcat gtatttgtag tgatgtgctt 2160
gatgaactgc atggtgtaca atctctattt tcctggttac atttaactat tcctcatgtt 2220
acaataatat gtacatatag gcatgcaccc ccctatatag gagatcatat tgtagatctt 2280
aacaatgtag atgaacaaag tggattatat agatatcaca tgggtggcat cgaagggtgg 2340
tgtcaaaaac tatggaccat agaagctata tcactattgg atctaatatc tctcaaaggg 2400
aaattctcaa ttactgcttt aattaatggt gacaatcaat caatagatat aagcaaacca 2460
attagactca tggaaggtca aactcatgct caagcagatt atttgctagc attaaatagc 2520
cttaaattac tgtataaaga gtatgcaggc ataggccaca aattaaaagg aactgagact 2580
tatatatcac gagatatgca atttatgagt aaaacaattc aacataacgg tgtgtattac 2640
ccagctagta taaagaaagt cctaagagtg ggaccgtgga taaacactat acttgatgat 2700
ttcaaagtga gtttagaatc tataggtagt ttgacacaag aattagaata tagaggtgaa 2760
agtctattat gcagtttaat atttagaaat gtatggttat ataatcagat tgctctacaa 2820
ttaaaaaatc atgcattatg taacaataaa ctatatttgg acatattaaa ggttctgaaa 2880
cacttaaaaa ccttttttaa tcttgataat attgatacag cattaacatt gtatatgaat 2940
ttacctatgt tatttggtgg tggtgatccc aacttgttat atcgaagttt ctatagaaga 3000
acccccgact tcctcacaga ggctatagtt cactctgtgt tcatacttag ttattataca 3060
aaccatgact taaaagataa acttcaagat ctgtcagatg atagattgaa taagttctta 3120
acatgcataa tcacgtttga caaaaaccct aacgctgaat tcgtaacatt gatgagagat 3180
cctcaagctt tagggtctga gagacaagct aaaattacta gcgaaatcaa taggctggca 3240
gttacagagg ttttgagtac agctccaaac aaaatattct ccaaaagtgc acaacattat 3300
accactacag agatagatct aaatgatatt atgcaaaata tagaacctac atatcctcat 3360
gggctaagag ttgtttatga aagtttaccc ttttataaag cagagaaaat agtaaatctt 3420
atatcaggta caaaatctat aactaacata ctggaaaaaa cttctgccat agacttaaca 3480
gatattgata gagccactga gatgatgagg aaaaacataa ctttgcttat aaggatactt 3540
ccattggatt gtaacagaga taaaagagag atattgagta tggaaaacct aagtattact 3600
gaattaagca aatatgttag ggaaagatct tggtctttat tcaatatagt tggtgttaca 3660
tcacccagta tcatgtatac aatggacatc aaatatacta caagcactat agctagtggc 3720
ataattatag agaaatataa tgttaacagt ttaacacgtg gtgagagagg acccactaaa 3780
ccatgggttg gttcatctac acaagagaaa aaaacaatgc cagtttataa tagacaagtc 3840
ttaaccaaaa aacagagaga tcaaatagat ctattagcaa aattggattg ggtgtatgca 3900
tctatagata acaaggatga attcatggaa gaactcagca taggaaccct tgggttaaca 3960
tatgaaaaag ccaagaaatt atttccacaa tatttaagtg tcaactattt gcatcgactt 4020
acagtcagta gtagaccatg tgaattccct gcatcaatac cagcttatag aacaacaaat 4080
tatcactttg acactagccc tattaatcgc atattaacag aaaagtatgg tgatgaagat 4140
attgacatag tattccaaaa ctgtataagc tttggcctta gcttaatgtc agtagtagaa 4200
caatttacta atgtatgtcc taacagaatt attctcatac ctaagcttaa tgagatacat 4260
ttgatgaaac ctcccatatt cacaggtgat gttgatattc acaagttaaa acaagtgata 4320
caaaaacagc atatgttttt accagacaaa ataagtttga ctcaatatgt agaattattc 4380
ttaagtaata aaacactcaa atctggatct catgttaatt ctaatttaat attggcacat 4440
aaaatatctg actattttca taatacttac attttaagta ctaatttagc tggacattgg 4500
attctgatta tacaacttat gaaagattct aagggtattt ttgaaaaaga ttggggagag 4560
ggatatataa ctgatcatat gtttattaat ttgaaagttt tcttcaatgc ctataagacc 4620
tatctcttgt gttttcataa aggttatggc aaagcaaagc tggagtgtga tatgaacacc 4680
tcagatctcc tatgtgtatt ggaattaata gacagtagtt attggaaatc tatgtctaag 4740
gtatttttag aacaaaaagt tatcaaatac attcttagcc aagatgcaag tttacataga 4800
gtaaaaggat gtcatagctt caaattatgg tttcttaaac gtcttaatgt agcagaattc 4860
acagtttgcc cttgggttgt taacatagat tatcatccaa cacatatgaa agcaatatta 4920
acttatatag atcttgttag aatgggattg ataaatatag atagaataca cattaaaaat 4980
aaacacaaat tcaatgatga attttatact tctaatctct tctacattaa ttataacttc 5040
tcagataata ctcatctatt aactaaacat ataaggattg ctaattctga attagaaaat 5100
aattacaaca aattatatca tcctacacca gaaaccctag agaatatact agccaatccg 5160
attaaaagta atgacaaaaa gacactgaat gaatattgta taggtaaaaa tgttgactca 5220
ataatgttac cattgttatc taataagaag cttattaaat cgtctgcaat gattagaacc 5280
aattacagca aacaagattt gtataattta ttccctatgg ttgtgattga tagaattata 5340
gatcattcag gcaatacagc caaatccaac caactttaca ctactacttc ccaccaaata 5400
tctttagtgc acaatagcac atcactttac tgcatgcttc cttggcatca tattaataga 5460
ttcaattttg tatttagttc tacaggttgt aaaattagta tagagtatat tttaaaagat 5520
cttaaaatta aagatcccaa ttgtatagca ttcataggtg aaggagcagg gaatttatta 5580
ttgcgtacag tagtggaact tcatcctgac ataagatata tttacagaag tctgaaagat 5640
tgcaatgatc atagtttacc tattgagttt ttaaggctgt acaatggaca tatcaacatt 5700
gattatggtg aaaatttgac cattcctgct acagatgcaa ccaacaacat tcattggtct 5760
tatttacata taaagtttgc tgaacctatc agtctttttg tctgtgatgc tgaattgcct 5820
gtaacagtca attggagtaa aattataata gaatggagca agcatgtaag aaagtgcaag 5880
tactgttcct cagttaataa atgtatgtta atagtaaaat atcatgctca agatgatatt 5940
gatttcaaat tagacaatat aactatatta aaaacttatg tatgcttagg cagtaagtta 6000
aagggatcgg aggtttactt agtcatcaca ataggtcctg caaatatatt cccagcattt 6060
aatgtagtac aaaatgctaa attgatacta tcaagaacca aaaatttcat catgcctaag 6120
aaagctgata aagagtctat tgatgcaaat attaaaagtt tnataccctt tctttgttac 6180
cctataacaa aaaaaggaat taatactgca ttgtcaaaac taaagagtgt tgttagtgga 6240
gatatactat catattctat agctggacgt aatgaagttt tcagcaataa acttataaat 6300
cataaacata tgaacatctt aaaatggttc aatcatgttt taaatttcag atcaacagaa 6360
ttaaactata accatttata tatggtagaa tctacatatc cttacctaag tgaattgtta 6420
aacagcttga caaccaatga acttaaaaaa ctgattaaaa tcacaggtag tctgttatac 6480
aactttcata atgaataatg aataa                                       6505



<210> 24
<211> 2166
<212> PRT
<213> Respiratory syncytial virus, Merck strain p17

<220> 
<221> SITE           
<222> (148)...(148)
<223> Xaa = Asp or Ala

<220> 
<221> SITE           
<222> (2054)...(2054)
<223> Xaa = Leu or Phe

<400> 24
Met Asp Pro Ile Ile Asn Gly Asn Ser Ala Asn Val Tyr Leu Thr Asp
 1               5                  10                  15      
Ser Tyr Leu Lys Gly Val Ile Ser Phe Ser Glu Cys Asn Ala Leu Gly
            20                  25                  30          
Ser Tyr Ile Phe Asn Gly Pro Tyr Leu Lys Asn Asp Tyr Thr Asn Leu
        35                  40                  45              
Ile Ser Arg Gln Asn Pro Leu Ile Glu His Met Asn Leu Lys Lys Leu
    50                  55                  60                  
Asn Ile Thr Gln Ser Leu Ile Ser Lys Tyr His Lys Gly Glu Ile Lys
65                  70                  75                  80  
Leu Glu Glu Pro Thr Tyr Phe Gln Ser Leu Leu Met Thr Tyr Lys Ser
                85                  90                  95      
Met Thr Ser Ser Glu Gln Ile Ala Thr Thr Asn Leu Leu Lys Lys Ile
            100                 105                 110         
Ile Arg Arg Ala Ile Glu Ile Ser Asp Val Lys Val Tyr Ala Ile Leu
        115                 120                 125             
Asn Lys Leu Gly Leu Lys Glu Lys Asp Lys Ile Lys Ser Asn Asn Gly
    130                 135                 140                 
Gln Asp Glu Xaa Asn Ser Val Ile Thr Thr Ile Ile Lys Asp Asp Ile
145                 150                 155                 160 
Leu Ser Ala Val Lys Asp Asn Gln Ser His Leu Lys Ala Gly Lys Asn
                165                 170                 175     
His Ser Thr Lys Gln Lys Asp Thr Ile Lys Thr Thr Leu Leu Lys Lys
            180                 185                 190         
Leu Met Cys Ser Met Gln His Pro Pro Ser Trp Leu Ile His Trp Phe
        195                 200                 205             
Asn Leu Tyr Thr Lys Leu Asn Asn Ile Leu Thr Gln Tyr Arg Ser Asn
    210                 215                 220                 
Glu Val Lys Asn His Gly Phe Thr Leu Ile Asp Asn Gln Thr Leu Ser
225                 230                 235                 240 
Gly Phe Gln Phe Ile Leu Asn Gln Tyr Gly Cys Ile Val Tyr Asn Lys
                245                 250                 255     
Glu Leu Lys Arg Ile Thr Val Thr Thr Tyr Asn Gln Phe Leu Thr Trp
            260                 265                 270         
Lys Asp Ile Ser Leu Ser Arg Leu Asn Val Cys Leu Ile Thr Trp Ile
        275                 280                 285             
Ser Asn Cys Leu Asn Thr Leu Asn Lys Ser Leu Gly Leu Arg Cys Gly
    290                 295                 300                 
Phe Asn Asn Val Ile Leu Thr Gln Leu Phe Leu Tyr Gly Asp Cys Ile
305                 310                 315                 320 
Leu Lys Leu Phe His Asn Glu Gly Phe Tyr Ile Ile Lys Glu Val Glu
                325                 330                 335     
Gly Phe Ile Met Ser Leu Ile Leu Asn Ile Thr Glu Glu Asp Gln Phe
            340                 345                 350         
Arg Lys Arg Phe Tyr Asn Ser Met Leu Asn Asn Ile Thr Asp Ala Ala
        355                 360                 365             
Asn Lys Ala Gln Lys Asn Leu Leu Ser Arg Val Cys His Thr Leu Leu
    370                 375                 380                 
Asp Lys Thr Val Ser Asp Asn Ile Ile Asn Gly Arg Trp Ile Ile Leu
385                 390                 395                 400 
Leu Ser Lys Phe Leu Lys Leu Ile Lys Leu Ala Gly Asp Asn Asn Leu
                405                 410                 415     
Asn Asn Leu Ser Glu Leu Tyr Phe Leu Phe Arg Ile Phe Gly His Pro
            420                 425                 430         
Met Val Asp Glu Arg Gln Ala Met Asp Ala Val Lys Ile Asn Cys Asn
        435                 440                 445             
Glu Thr Lys Phe Tyr Leu Leu Ser Ser Leu Ser Met Leu Arg Gly Ala
    450                 455                 460                 
Phe Ile Tyr Arg Ile Ile Lys Gly Phe Val Asn Asn Tyr Asn Arg Trp
465                 470                 475                 480 
Pro Thr Leu Arg Asn Ala Ile Val Leu Pro Leu Arg Trp Leu Thr Tyr
                485                 490                 495     
Tyr Lys Leu Asn Thr Tyr Pro Ser Leu Leu Glu Leu Thr Glu Arg Asp
            500                 505                 510         
Leu Ile Val Leu Ser Gly Leu Arg Phe Tyr Arg Glu Phe Arg Leu Pro
        515                 520                 525             
Lys Lys Val Asp Leu Glu Met Ile Ile Asn Asp Lys Ala Ile Ser Pro
    530                 535                 540                 
Pro Lys Asn Leu Ile Trp Thr Ser Phe Pro Arg Asn Tyr Met Pro Ser
545                 550                 555                 560 
His Ile Gln Asn Tyr Ile Glu His Glu Lys Leu Lys Phe Ser Glu Ser
                565                 570                 575     
Asp Lys Ser Arg Arg Val Leu Glu Tyr Tyr Leu Arg Asp Asn Lys Phe
            580                 585                 590         
Asn Glu Cys Asp Leu Tyr Asn Cys Val Val Asp Gln Ser Tyr Leu Asn
        595                 600                 605             
Asn Pro Asn His Val Val Ser Leu Thr Gly Lys Glu Arg Glu Leu Ser
    610                 615                 620                 
Val Gly Arg Met Phe Ala Met Gln Pro Gly Met Phe Arg Gln Val Gln
625                 630                 635                 640 
Ile Leu Ala Glu Lys Met Ile Ala Glu Asn Ile Leu Gln Phe Phe Pro
                645                 650                 655     
Glu Ser Leu Thr Arg Tyr Gly Asp Leu Glu Leu Gln Lys Ile Leu Glu
            660                 665                 670         
Leu Lys Ala Gly Ile Ser Asn Lys Ser Asn Arg Tyr Asn Asp Asn Tyr
        675                 680                 685             
Asn Asn Tyr Ile Ser Lys Cys Ser Ile Ile Thr Asp Leu Ser Lys Phe
    690                 695                 700                 
Asn Gln Ala Phe Arg Tyr Glu Thr Ser Cys Ile Cys Ser Asp Val Leu
705                 710                 715                 720 
Asp Glu Leu His Gly Val Gln Ser Leu Phe Ser Trp Leu His Leu Thr
                725                 730                 735     
Ile Pro His Val Thr Ile Ile Cys Thr Tyr Arg His Ala Pro Pro Tyr
            740                 745                 750         
Ile Gly Asp His Ile Val Asp Leu Asn Asn Val Asp Glu Gln Ser Gly
        755                 760                 765             
Leu Tyr Arg Tyr His Met Gly Gly Ile Glu Gly Trp Cys Gln Lys Leu
    770                 775                 780                 
Trp Thr Ile Glu Ala Ile Ser Leu Leu Asp Leu Ile Ser Leu Lys Gly
785                 790                 795                 800 
Lys Phe Ser Ile Thr Ala Leu Ile Asn Gly Asp Asn Gln Ser Ile Asp
                805                 810                 815     
Ile Ser Lys Pro Ile Arg Leu Met Glu Gly Gln Thr His Ala Gln Ala
            820                 825                 830         
Asp Tyr Leu Leu Ala Leu Asn Ser Leu Lys Leu Leu Tyr Lys Glu Tyr
        835                 840                 845             
Ala Gly Ile Gly His Lys Leu Lys Gly Thr Glu Thr Tyr Ile Ser Arg
    850                 855                 860                 
Asp Met Gln Phe Met Ser Lys Thr Ile Gln His Asn Gly Val Tyr Tyr
865                 870                 875                 880 
Pro Ala Ser Ile Lys Lys Val Leu Arg Val Gly Pro Trp Ile Asn Thr
                885                 890                 895     
Ile Leu Asp Asp Phe Lys Val Ser Leu Glu Ser Ile Gly Ser Leu Thr
            900                 905                 910         
Gln Glu Leu Glu Tyr Arg Gly Glu Ser Leu Leu Cys Ser Leu Ile Phe
        915                 920                 925             
Arg Asn Val Trp Leu Tyr Asn Gln Ile Ala Leu Gln Leu Lys Asn His
    930                 935                 940                 
Ala Leu Cys Asn Asn Lys Leu Tyr Leu Asp Ile Leu Lys Val Leu Lys
945                 950                 955                 960 
His Leu Lys Thr Phe Phe Asn Leu Asp Asn Ile Asp Thr Ala Leu Thr
                965                 970                 975     
Leu Tyr Met Asn Leu Pro Met Leu Phe Gly Gly Gly Asp Pro Asn Leu
            980                 985                 990         
Leu Tyr Arg Ser Phe Tyr Arg Arg Thr Pro Asp Phe Leu Thr Glu Ala
        995                 1000                1005            
Ile Val His Ser Val Phe Ile Leu Ser Tyr Tyr Thr Asn His Asp Leu
    1010                1015                1020                
Lys Asp Lys Leu Gln Asp Leu Ser Asp Asp Arg Leu Asn Lys Phe Leu
1025                1030                1035               1040 
Thr Cys Ile Ile Thr Phe Asp Lys Asn Pro Asn Ala Glu Phe Val Thr
                1045                1050                1055    
Leu Met Arg Asp Pro Gln Ala Leu Gly Ser Glu Arg Gln Ala Lys Ile
            1060                1065                1070        
Thr Ser Glu Ile Asn Arg Leu Ala Val Thr Glu Val Leu Ser Thr Ala
        1075                1080                1085            
Pro Asn Lys Ile Phe Ser Lys Ser Ala Gln His Tyr Thr Thr Thr Glu
    1090                1095                1100                
Ile Asp Leu Asn Asp Ile Met Gln Asn Ile Glu Pro Thr Tyr Pro His
1105                1110                1115               1120 
Gly Leu Arg Val Val Tyr Glu Ser Leu Pro Phe Tyr Lys Ala Glu Lys
                1125                1130                1135    
Ile Val Asn Leu Ile Ser Gly Thr Lys Ser Ile Thr Asn Ile Leu Glu
            1140                1145                1150        
Lys Thr Ser Ala Ile Asp Leu Thr Asp Ile Asp Arg Ala Thr Glu Met
        1155                1160                1165            
Met Arg Lys Asn Ile Thr Leu Leu Ile Arg Ile Leu Pro Leu Asp Cys
    1170                1175                1180                
Asn Arg Asp Lys Arg Glu Ile Leu Ser Met Glu Asn Leu Ser Ile Thr
1185                1190                1195               1200 
Glu Leu Ser Lys Tyr Val Arg Glu Arg Ser Trp Ser Leu Phe Asn Ile
                1205                1210                1215    
Val Gly Val Thr Ser Pro Ser Ile Met Tyr Thr Met Asp Ile Lys Tyr
            1220                1225                1230        
Thr Thr Ser Thr Ile Ala Ser Gly Ile Ile Ile Glu Lys Tyr Asn Val
        1235                1240                1245            
Asn Ser Leu Thr Arg Gly Glu Arg Gly Pro Thr Lys Pro Trp Val Gly
    1250                1255                1260                
Ser Ser Thr Gln Glu Lys Lys Thr Met Pro Val Tyr Asn Arg Gln Val
1265                1270                1275               1280 
Leu Thr Lys Lys Gln Arg Asp Gln Ile Asp Leu Leu Ala Lys Leu Asp
                1285                1290                1295    
Trp Val Tyr Ala Ser Ile Asp Asn Lys Asp Glu Phe Met Glu Glu Leu
            1300                1305                1310        
Ser Ile Gly Thr Leu Gly Leu Thr Tyr Glu Lys Ala Lys Lys Leu Phe
        1315                1320                1325            
Pro Gln Tyr Leu Ser Val Asn Tyr Leu His Arg Leu Thr Val Ser Ser
    1330                1335                1340                
Arg Pro Cys Glu Phe Pro Ala Ser Ile Pro Ala Tyr Arg Thr Thr Asn
1345                1350                1355               1360 
Tyr His Phe Asp Thr Ser Pro Ile Asn Arg Ile Leu Thr Glu Lys Tyr
                1365                1370                1375    
Gly Asp Glu Asp Ile Asp Ile Val Phe Gln Asn Cys Ile Ser Phe Gly
            1380                1385                1390        
Leu Ser Leu Met Ser Val Val Glu Gln Phe Thr Asn Val Cys Pro Asn
        1395                1400                1405            
Arg Ile Ile Leu Ile Pro Lys Leu Asn Glu Ile His Leu Met Lys Pro
    1410                1415                1420                
Pro Ile Phe Thr Gly Asp Val Asp Ile His Lys Leu Lys Gln Val Ile
1425                1430                1435               1440 
Gln Lys Gln His Met Phe Leu Pro Asp Lys Ile Ser Leu Thr Gln Tyr
                1445                1450                1455    
Val Glu Leu Phe Leu Ser Asn Lys Thr Leu Lys Ser Gly Ser His Val
            1460                1465                1470        
Asn Ser Asn Leu Ile Leu Ala His Lys Ile Ser Asp Tyr Phe His Asn
        1475                1480                1485            
Thr Tyr Ile Leu Ser Thr Asn Leu Ala Gly His Trp Ile Leu Ile Ile
    1490                1495                1500                
Gln Leu Met Lys Asp Ser Lys Gly Ile Phe Glu Lys Asp Trp Gly Glu
1505                1510                1515               1520 
Gly Tyr Ile Thr Asp His Met Phe Ile Asn Leu Lys Val Phe Phe Asn
                1525                1530                1535    
Ala Tyr Lys Thr Tyr Leu Leu Cys Phe His Lys Gly Tyr Gly Lys Ala
            1540                1545                1550        
Lys Leu Glu Cys Asp Met Asn Thr Ser Asp Leu Leu Cys Val Leu Glu
        1555                1560                1565            
Leu Ile Asp Ser Ser Tyr Trp Lys Ser Met Ser Lys Val Phe Leu Glu
    1570                1575                1580                
Gln Lys Val Ile Lys Tyr Ile Leu Ser Gln Asp Ala Ser Leu His Arg
1585                1590                1595               1600 
Val Lys Gly Cys His Ser Phe Lys Leu Trp Phe Leu Lys Arg Leu Asn
                1605                1610                1615    
Val Ala Glu Phe Thr Val Cys Pro Trp Val Val Asn Ile Asp Tyr His
            1620                1625                1630        
Pro Thr His Met Lys Ala Ile Leu Thr Tyr Ile Asp Leu Val Arg Met
        1635                1640                1645            
Gly Leu Ile Asn Ile Asp Arg Ile His Ile Lys Asn Lys His Lys Phe
    1650                1655                1660                
Asn Asp Glu Phe Tyr Thr Ser Asn Leu Phe Tyr Ile Asn Tyr Asn Phe
1665                1670                1675               1680 
Ser Asp Asn Thr His Leu Leu Thr Lys His Ile Arg Ile Ala Asn Ser
                1685                1690                1695    
Glu Leu Glu Asn Asn Tyr Asn Lys Leu Tyr His Pro Thr Pro Glu Thr
            1700                1705                1710        
Leu Glu Asn Ile Leu Ala Asn Pro Ile Lys Ser Asn Asp Lys Lys Thr
        1715                1720                1725            
Leu Asn Glu Tyr Cys Ile Gly Lys Asn Val Asp Ser Ile Met Leu Pro
    1730                1735                1740                
Leu Leu Ser Asn Lys Lys Leu Ile Lys Ser Ser Ala Met Ile Arg Thr
1745                1750                1755               1760 
Asn Tyr Ser Lys Gln Asp Leu Tyr Asn Leu Phe Pro Met Val Val Ile
                1765                1770                1775    
Asp Arg Ile Ile Asp His Ser Gly Asn Thr Ala Lys Ser Asn Gln Leu
            1780                1785                1790        
Tyr Thr Thr Thr Ser His Gln Ile Ser Leu Val His Asn Ser Thr Ser
        1795                1800                1805            
Leu Tyr Cys Met Leu Pro Trp His His Ile Asn Arg Phe Asn Phe Val
    1810                1815                1820                
Phe Ser Ser Thr Gly Cys Lys Ile Ser Ile Glu Tyr Ile Leu Lys Asp
1825                1830                1835               1840 
Leu Lys Ile Lys Asp Pro Asn Cys Ile Ala Phe Ile Gly Glu Gly Ala
                1845                1850                1855    
Gly Asn Leu Leu Leu Arg Thr Val Val Glu Leu His Pro Asp Ile Arg
            1860                1865                1870        
Tyr Ile Tyr Arg Ser Leu Lys Asp Cys Asn Asp His Ser Leu Pro Ile
        1875                1880                1885            
Glu Phe Leu Arg Leu Tyr Asn Gly His Ile Asn Ile Asp Tyr Gly Glu
    1890                1895                1900                
Asn Leu Thr Ile Pro Ala Thr Asp Ala Thr Asn Asn Ile His Trp Ser
1905                1910                1915               1920 
Tyr Leu His Ile Lys Phe Ala Glu Pro Ile Ser Leu Phe Val Cys Asp
                1925                1930                1935    
Ala Glu Leu Pro Val Thr Val Asn Trp Ser Lys Ile Ile Ile Glu Trp
            1940                1945                1950        
Ser Lys His Val Arg Lys Cys Lys Tyr Cys Ser Ser Val Asn Lys Cys
        1955                1960                1965            
Met Leu Ile Val Lys Tyr His Ala Gln Asp Asp Ile Asp Phe Lys Leu
    1970                1975                1980                
Asp Asn Ile Thr Ile Leu Lys Thr Tyr Val Cys Leu Gly Ser Lys Leu
1985                1990                1995               2000 
Lys Gly Ser Glu Val Tyr Leu Val Ile Thr Ile Gly Pro Ala Asn Ile
                2005                2010                2015    
Phe Pro Ala Phe Asn Val Val Gln Asn Ala Lys Leu Ile Leu Ser Arg
            2020                2025                2030        
Thr Lys Asn Phe Ile Met Pro Lys Lys Ala Asp Lys Glu Ser Ile Asp
        2035                2040                2045            
Ala Asn Ile Lys Ser Xaa Ile Pro Phe Leu Cys Tyr Pro Ile Thr Lys
    2050                2055                2060                
Lys Gly Ile Asn Thr Ala Leu Ser Lys Leu Lys Ser Val Val Ser Gly
2065                2070                2075               2080 
Asp Ile Leu Ser Tyr Ser Ile Ala Gly Arg Asn Glu Val Phe Ser Asn
                2085                2090                2095    
Lys Leu Ile Asn His Lys His Met Asn Ile Leu Lys Trp Phe Asn His
            2100                2105                2110        
Val Leu Asn Phe Arg Ser Thr Glu Leu Asn Tyr Asn His Leu Tyr Met
        2115                2120                2125            
Val Glu Ser Thr Tyr Pro Tyr Leu Ser Glu Leu Leu Asn Ser Leu Thr
    2130                2135                2140                
Thr Asn Glu Leu Lys Lys Leu Ile Lys Ile Thr Gly Ser Leu Leu Tyr
2145                2150                2155               2160 
Asn Phe His Asn Glu Ile
                2165    


<210> 25
<211> 15205
<212> DNA
<213> Respiratory syncytial virus, Merck strain 287

<400> 25
acgggaaaaa atgcgtacaa caaacttgcg taaaccaaaa aaatggggca aataagagtt 60
tgataagtac cacttaaatt taactccctt agttagagat gggcagcaat tcattgagta 120
tgataaaagt tagattacaa aatttgtttg acaatgatga agtagcattg ttaaaaataa 180
catgctatac tgataaatta atacatttaa ctaatgcttt ggctaaggca gtgatacata 240
caataaaatt gaatggcatt gtgtttgtgc atgttattac aagtagtgat atttgcccta 300
ataataatat tgtagtaaaa tccaatttca caacaatgcc agtactacaa aatggaggct 360
atatatggga aatgatggaa ttaacacatt gctctcaacc taatggtcta ctagatgaca 420
attgtgaaat taaattctcc aaaaaactaa gtgattcaac aatgaccaat tatatgaatc 480
aattatctga attgcttgga tttgatctta atccataaat tataattaat atcaactagc 540
taatcaatgt cactaacacc attagttaat ataaaactta acagaagaca aaaatggggc 600
aaataaatca attcagccaa cccaaccatg gacacgactc acaatgatac cacaccacaa 660
agactgatga tcacagatat gagaccattg tcacttgaga ccataataac atcactaacc 720
agagacatca taacacacaa atttatatac ttgataaatc atgaatgcat agtgagaaaa 780
cttgatgaaa gacaagccac atttacattc ctggtcaact atgaaatgaa actattgcac 840
aaagtaggaa gcactaaata taaaaaatat actgaataca acacaaaata tggcactttc 900
cctatgccga tattcatcaa tcatgatggg ttcttagaat gcattggcat taagcctaca 960
aagcatactc ccataatata caagtatgat ctcaatccat aaacttcaac acaatattca 1020
cacaatctaa aacaacaact ctatgcatga ctacactcca tagtccaaat ggagcctgaa 1080
aattatagta atttaaaatt aaggagagat ataagataga agatggggca aatacaaaga 1140
tggctcttag caaagtcaag ttgaatgata cactcaacaa agatcaactt ctgtcatcta 1200
gcaaatacac catccaacgg agcacaggag atagtattga tactcctaat tatgatgtgc 1260
agaaacacat caataagtta tgtggcatgt tattaatcac agaagatgct aatcataaat 1320
tcactgggtt aataggtatg ttatatgcga tgtctaggtt aggaagagaa gacaccataa 1380
aaatactcag agatgcggga tatcatgtaa aagcaaatgg agtagatgta acaacacatc 1440
gtcaagacat taatgggaaa gaaatgaaat ttgaagtgtt aacattggca agcttaacaa 1500
ctgaaattca aatcaacatt gaaatagaat ctagaaaatc ctacaaaaaa atgctaaaag 1560
aaatgggaga ggtagctcca gaatacaggc atgactctcc tgattgtggg atgataatat 1620
tatgtatagc agcattagta ataaccaaat tggcagcagg ggatagatct ggtcttacag 1680
ctgtgattag gagagctaat aatgtcttaa aaaatgaaat gaaacgttat aaaggcttac 1740
tacccaagga catagccaac agcttctatg aggtgtttga aaaacatccc cactttatag 1800
atgtttttgt tcattttggt atagcacaat cttctaccag aggtggcagt agagtcgaag 1860
ggatttttgc aggattgttt atgaatgcct atggtgcagg gcaagtgatg ttacggtggg 1920
gagtcttagc aaaatcagtt aaaaatatta tgttaggaca tgctagtgtg caagcagaaa 1980
tggaacaagt tgttgaggtt tatgaatatg cccaaaaatt gggtggtgaa gcaggattct 2040
accatatatt gaacaaccca aaagcttcat tattatcctt gactcaattt cctcacttct 2100
ccagtgtagt attaggcaat gctgctggcc taggcataat gggagagtac agaggtacac 2160
cgaggaatca agatctatat gatgcagcaa aggcatatgc tgaacaactc aaagaaaatg 2220
gtgtgattaa ctacagtgta ctagacttga cagcagaaga actagaggct atcaaacatc 2280
agcttaatcc aaaagataat gatgtagagc tttgagttaa taaaaaaatg gggcaaataa 2340
atcatcatgg aaaagtttgc tcctgaattc catggagaag atgcaaacaa cagggctact 2400
aaatttctag agtcaataaa gggcaaattc gcatcaccta aagatcccaa gaaaaaagat 2460
agtatcatat ctgtcaactc aatagatata gaagtaacca aagaaagccc tataacatca 2520
aattcaacta ttatcaaccc aacaaatgag acagatgata ctgcagggaa caagcccaat 2580
tatcaaagaa aacctctagt aagtttcaaa gaagacccca caccaagtga taatcccttt 2640
tctaaactat acaaagaaac catagaaaca tttgataaca atgaagaaga atccagctat 2700
tcatatgagg aaataaatga tcagacaaac gacaatataa cggcaagatt agataggatt 2760
gatgaaaagt taagtgaaat actaggaatg cttcacacat tagtggtggc aagtgcagga 2820
cctacatctg ctcgggatgg tataagagat gccatggttg gtttaagaga agaaatgata 2880
gaaaaaatca gaactgaagc attaatgacc aatgacagat tagaagctat ggcaagactc 2940
aggaatgagg aaagtgaaaa gatggcaaaa gacacatcag atgaagtatc tctaaatcca 3000
acatcagaga aattgaacaa cctgttggaa gggaatgata gtgacaatga tctatcactt 3060
gaagatttct gattagttac caatcttaac atcaaaacac aacaccaaca gaagaccaac 3120
aaactaacca acccaatcat ccaaccaaac atccatctgc caatcagcta agcagccaac 3180
aaaacaacca gccaatccaa aactagccac ccggaaaaaa tcgacaatat agttacaaaa 3240
aaagaaaggg tggggcaaat atggaaacat acgtgaacaa gcttcacgaa ggctccacat 3300
acacagctgc tgttcaatac aatgtcctag aaaaagacga tgaccctgca tcacttacaa 3360
tatgggtgcc catgttccaa tcatctatgc cagcagattt actcataaaa gaactagcta 3420
atgtcaacat actagtgaaa caaatatcca cacccaaggg accttcacta agagtcatga 3480
taaactcaag aagtgcagtg ctagcacaaa tgcccagcaa atttaccata agcgctaatg 3540
tgtccttaga tgaaagaagc aaactagcat atgatgtaac cacaccctgt gaaatcaagg 3600
catgcagtct aacatgccta aaatcaaaaa atatgttaac tacagttaaa gatctcacta 3660
tgaagacact caaccctaca catgatatta ttgctttatg tgaatttgaa aacatagtaa 3720
catcaaaaaa agtcataata ccaacatacc taagatccat cagtgtcaga aataaggatc 3780
tgaacacact tgaaaatata acaaccactg aattcaaaaa tgctatcaca aatgcaaaaa 3840
tcatccctta ctcaggatta ctattagtca tcacagtgac tgacaacaaa ggagcattca 3900
aatacataaa gccacaaagt caattcatag tagatcttgg agcttaccta gaaaaagaaa 3960
gtatatatta tgtcaccaca aattggaagc acacagctac aagatttgca atcaaaccta 4020
tggaagatta accttcttca actacatcag tgtgttaatt catacaaact ttctacctac 4080
attcttcact tcaccatcac aatcacaaac acttcgtggt tcaaccaatc aaacaaaact 4140
tatctaaagt cccagatcat cccaagtcat tgtttatcag atctagtact caaataagtt 4200
aataaaaaca tacacatggg gcaaataatc atcggagaaa atccaactaa tcacaatatc 4260
tgttaacata gacaagtcaa cacaccatac agaatcaacc gatggaaaat acatccataa 4320
caatagaatt ctcaagcaaa ttctggccct actttacact aatacacatg atcacaacaa 4380
taatctcttt actaatcata atctccatca tgattgcaat actaaacaaa ctttgtgaat 4440
ataacgtatt ccataacaaa acctttgagt taccaagagc tcgagtcaac acatagcatt 4500
catcaatcca acagctcaaa acagtaacct tgtatttaaa agtgaacaac ccctgcctct 4560
ttacaacacc ttatcaacgt cccaccatgc aaaccaccat ccatactata tagtagttaa 4620
ttaaaatagt cataacaatg aactaggata tcaagactaa caataacatt ggggcaaatg 4680
caaacatgtc caaaaacaaa gaccaacgca ctgctaagac actagaaagg acctgggaca 4740
ctctcaatca tttattattc atatcatcgt gcttatataa gttaaatctt aaatctgtag 4800
cacaaatcac attatccatt ttggcaatga taatctcaac ttcacttata attgcagcca 4860
tcatattcat tgcctcggca aaccacaaag tcacatcaac aactacaatc atacaagatg 4920
caacaagcca gatcaagaac acaaccccaa catacctcac ccagagtcct cagcttggaa 4980
tcagtccctc taatccgtct gaaattacat cacaaatcac caccatacta gcttcaacaa 5040
caccaggagt caagtcaacc ctgcaatcca caacagtcgg gaccaagaat acaacaacaa 5100
ctcaagcaca acccagcaag cccaccacaa aacaacgcca aaacaaacca ccaagcaaac 5160
ccaacaatga ttttcacttt gaagtgttca actttgtacc ctgcagcata tgcagcaaca 5220
atccaacctg ctgggccatc tgcaaaagaa tacccaacaa aaaaccagga aagaaaacca 5280
ccaccaagcc cacaaaaaaa ccaaccttca agacaaccaa aaaagatccc aaacctcaaa 5340
ccactaaatc aaaggaggta cccaccacca agcccacaga agagccaact atcaacacca 5400
ccaaaacaaa catcacaact acactactca cctccaacac cacgagaaat ccagaactca 5460
caagtcaaat ggaaaccttc cactcaactt cctccgaagg taatccaagc ccttctcaag 5520
tctccataac atccgagtac ctatcacaac cttcatctcc acccaacaca ccacgctagt 5580
agttattaaa aaacatatta tcacagaaag ccatgaccaa ctcaaacaga atcaaaataa 5640
actctggggc aaataacaat ggagttgcca atcctcaaag cgaatgcaat taccacaatc 5700
ctcactgcag tcacattttg ttttgcttct agtcaaaaca tcactgaaga attttatcaa 5760
tcaacatgca gtgcagttag caaaggctat cttagtgctc taagaactgg ttggtatacc 5820
agtgttataa ctatagaatt aagtaatatc aaggaaaata agtgtaatgg aacagatgct 5880
aaggtaaaat tgataaaaca agaattagat aaatataaaa atgctgtaac agaattgcag 5940
ttgctaatgc aaagcacacc agcagcaaac aatcgagcca gaagagaact accaaggttt 6000
atgaattata cactcaacaa tgccaaaaaa accaatgtaa cattaagcaa aaaaaggaaa 6060
agaagatttc ttggtttttt gttaggagtt ggatctgcaa tcgccagtgg cattgctgta 6120
tctaaggtcc tacacctaga aggggaagtg aacaagatca aaagtgctct actatccaca 6180
aacaaggctg tagtcagctt atcaaatgga gttagtgtct taaccagcaa agtgttagac 6240
ctcaaaaatt atatagataa acaattgtta cctattgtga acaagcaaag ctgcagcata 6300
tcaaatatag aaactgtgat agagttccaa caaaagaaca acagactact agagattacc 6360
agggaattta gtgttaatgc aggtgtaact acacctgtaa gcacttacat gttgactaat 6420
agtgaattat tgtcattaat caatgatatg cctataacaa atgatcagaa gaagttaatg 6480
tccaacaatg ttcaaatagt tagacagcaa agttactcta tcatgtccat aataaaagag 6540
gaagtcttag catatgtagt acaattacca ctatatggtg ttatagatac accttgttgg 6600
aaattacaca catcccctct atgtacaacc aacacaaaag aagggtccaa catctgttta 6660
acaagaactg acagaggatg gtactgtgac aatgcaggat cagtctcttt cttcccacaa 6720
gctgaaacat gtaaagttca atcgaatcga gtattttgtg acacaatgaa cagtttaaca 6780
ttaccaagtg aagtaaatct ctgcaatgtt gacatattca atcccaaata tgattgtaaa 6840
attatgactt caaaaacaga tgtaagcagc tctgttatca catctctagg agccattgtg 6900
tcatgctatg gcaaaactaa atgtacagca tccaataaaa atcgtggaat cataaagaca 6960
ttttctaacg ggtgcgatta tgtatcaaat aaaggggtgg acactgtgtc tgtaggcaac 7020
acattatatt atgtaaataa gcaagaaggc aaaagtctct atgtaaaagg tgaaccaata 7080
ataaatttct atgacccatt agtattcccc tctgatgaat ttgatgcatc aatatctcaa 7140
gtcaacgaga agattaacca gagcctggca tttattcgta aatccgatga attattacat 7200
aatgtaaatg ctggtaaatc caccacaaac atcatgataa ctgctataat tatagtgatt 7260
gtagtaatat tattatcatt aattgctgta ggactgctcc tatactgtaa ggccagaagc 7320
acaccagtca cactaagcaa agatcaactg agtggtataa ataatattgc atttagtaac 7380
taaataaaat agcatctaat catgttctta cgatggttta ctatctactc atagacagcc 7440
catctgtcat tggattttcc taaaatctga acttcatcga aactctcatc tataaaccat 7500
ctcacttaca ctatttaagt agattcctag ttcatagtta tataaaacat aattgaatgc 7560
cagattaact tactatctga aaaaatgaaa actggggcaa atatgtcacg aaggaatcct 7620
tgcaaatttg aaattcgagg tcattgctta aatggtaaga ggtgtcattt tagtcataat 7680
tattttgaat ggccacccca tgcactgctt gtaagacaaa actttatgtt aaacagaata 7740
cttaagtcta tggataaaag tatagatacc ttatcagaaa taagtggagc tgcagagttg 7800
gacagaacag aagagtatgc tcttggtgta gttggagtgc tagagagtta tataggatca 7860
ataaacaata taactaaaca atcagcatgt gttgccatga gcaaactcct cactgaactc 7920
aatagtgatg atatcaaaaa gctgagggac aatgaagagc taaattcacc caagataaga 7980
gtgtacaata ctgtcatatc atatattgaa agcaacagga aaaacaataa acaaactatc 8040
catctgttaa aaagattgcc agcagacgtg ttgaagaaaa ccatcaaaaa cacattggat 8100
atccataaga gcataaccat caacaaccca aaagaattaa ctgttagtga tacaaatgac 8160
catgccaaaa ataatgatac tacctgacaa atatccttgt agtataactt ccatactaat 8220
tacaagtaga tgtagagtta ctatgtataa tcaaaagaac acactatatt tcaatcaaaa 8280
caatccaaat aaccatatgt actcactaaa tcaaacattc aatgaaatcc attggacctc 8340
tcaagatttg attgacacaa ttcaaaattt tctacaacat ctaggtatta ctgaggatat 8400
atatacaata tatatattag tgtcataaca ctcaattcta acacttacaa catcgttaca 8460
ttattaaatc aaacaattca agttgtggga caaaatggat cccattatta atggaaattc 8520
tgctaatgtt tatctaaccg atagttattt aaaaggtgtt atctctttct cagagtgtaa 8580
tgctttagga agctacatat tcaatggtcc ttatctcaaa aatgattata ccaacttaat 8640
tagtagacaa aatccattaa tagaacacat gaatctaaag aaactaaata taacacagtc 8700
cttaatatct aagtatcata aaggtgaaat aaaattagaa gaaccgactt attttcagtc 8760
attacttatg acatacaaga gtatgacctc gtcagaacag attgctacca ctaatttact 8820
taaaaagata ataagaagag ctatagaaat aagtgatgtc aaagtctatg ctatattgaa 8880
taaactaggg cttaaagaaa aggacaagat taaatccaac aatggacaag atgaagacaa 8940
ttcagttatt acgaccataa tcaaagatga tatactttca gctgttaaag ataatcaatc 9000
tcatcttaaa gcaggcaaaa atcactctac aaaacaaaaa gacacaatca aaacaacact 9060
cctgaagaaa ttgatgtgtt caatgcaaca tcctccatca tggttaatac attggtttaa 9120
cttatacaca aaattaaaca acatattaac acagtatcga tcaaatgagg taaaaaacca 9180
tgggtttaca ttgatagata atcaaactct tagtggattt caatttattt tgaaccaata 9240
tggttgtata gtttataata aggaactcaa aagaattact gtgacaacct ataatcaatt 9300
cttgacatgg aaagatatta gccttagtag attaaatgtt tgtttaatta catggattag 9360
taactgcttg aacacattaa ataaaagctt aggcttaaga tgcggattca ataatgttat 9420
cttaacacaa ctattccttt atggagattg tatactaaaa ctatttcaca atgaggggtt 9480
ctacataata aaagaggtag agggatttat tatgtctcta attttaaata taacagaaga 9540
agatcaattc agaaaacgat tttataatag tatgctcaac aacatcacag atgctgctaa 9600
taaagctcag aaaaatctgc tatcaagagt atgtcataca ttattagata agacagtatc 9660
cgataatata ataaatggca gatggataat tctattaagt aagttcctta aattaattaa 9720
gcttgcgggt gacaataacc ttaacaatct gagtgaacta tattttttgt tcagaatatt 9780
tggacaccca atggtagatg aaagacaagc catggatgct gttaaaatta attgcaatga 9840
gaccaaattt tacttgctaa gcagtctaag tatgttaaga ggtgccttta tatatagaat 9900
tataaaaggg tttgtaaata attacaacag atggcctact ttaagaaatg ctattgtttt 9960
acccttaaga tggttaactt actataaact aaacacttat ccttctttgt tggaacttac 10020
agaaagagat ttgattgtgt tatcaggact acgtttctat cgtgagtttc ggttgcctaa 10080
aaaagtggat cttgaaatga ttataaatga taaagctata tcacctccta aaaatttgat 10140
atggactagt ttccctagaa attacatgcc atcacacata caaaactata tagaacatga 10200
aaaattaaaa ttttccgaga gtgataaatc aagaagagta ttagagtatt atttaagaga 10260
taacaagttc aatgaatgtg atttatacaa ctgtgtagtt gatcaaagtt atctaaacaa 10320
ccctaatcat gtggtatcat tgacaggcaa agaaagagaa ctcagtgtag gtagaatgtt 10380
tgcaatgcaa ccgggaatgt tcagacaggt tcaaatatta gcagagaaaa tgatagctga 10440
aaacatttta caattctttc ctgaaagtct tacaagatat ggtgatctag aactacaaaa 10500
aatattagaa ttgaaagcag gaataagtaa caaatcaaat cgctacaatg acaattacaa 10560
caattacatt agtaagtgct ctatcatcac agatctcagc aaattcaatc aagcatttcg 10620
atatgaaacg tcatgtattt gtagtgatgt gcttgatgaa ctgcatggtg tacaatctct 10680
attttcctgg ttacatttaa ctattcctca tgttacaata atatgtacat ataggcatgc 10740
acccccctat ataggagatc atattgtaga tcttaacaat gtagatgaac aaagtggatt 10800
atatagatat cacatgggtg gcatcgaagg gtggtgtcaa aaactatgga ccatagaagc 10860
tatatcacta ttggatctaa tatctctcaa agggaaattc tcaattactg ctttaattaa 10920
tggtgacaat caatcaatag atataagcaa accaattaga ctcatggaag gtcaaactca 10980
tgctcaagca gattatttgc tagcattaaa tagccttaaa ttactgtata aagagtatgc 11040
aggcataggc cacaaattaa aaggaactga gacttatata tcacgagata tgcaatttat 11100
gagtaaaaca attcaacata acggtgtgta ttacccagct agtataaaga aagtcctaag 11160
agtgggaccg tggataaaca ctatacttga tgatttcaaa gtgagtttag aatctatagg 11220
tagtttgaca caagaattag aatatagagg tgaaagtcta ttatgcagtt taatatttag 11280
aaatgtatgg ttatataatc agattgctct acaattaaaa aatcatgcat tatgtaacaa 11340
taaactatat ttggacatat taaaggttct gaaacactta aaaacctttt ttaatcttga 11400
taatattgat acagcattaa cattgtatat gaatttacct atgttatttg gtggtggtga 11460
tcccaacttg ttatatcgaa gtttctatag aagaaccccc gacttcctca cagaggctat 11520
agttcactct gtgttcatac ttagttatta tacaaaccat gacttaaaag ataaacttca 11580
agatctgtca gatgatagat tgaataagtt cttaacatgc ataatcacgt ttgacaaaaa 11640
ccctaacgct gaattcgtaa cattgatgag agatcctcaa gctttagggt ctgagagaca 11700
agctaaaatt actagcgaaa tcaataggct ggcagttaca gaggttttga gtacagctcc 11760
aaacaaaata ttctccaaaa gtgcacaaca ttataccact acagagatag atctaaatga 11820
tattatgcaa aatatagaac ctacatatcc tcatgggcta agagttgttt atgaaagttt 11880
acccttttat aaagcagaga aaatagtaaa tcttatatca ggtacaaaat ctataactaa 11940
catactggaa aaaacttctg ccatagactt aacagatatt gatagagcca ctgagatgat 12000
gaggaaaaac ataactttgc ttataaggat acttccattg gattgtaaca gagataaaag 12060
agagatattg agtatggaaa acctaagtat tactgaatta agcaaatatg ttagggaaag 12120
atcttggtct ttattcaata tagttggtgt tacatcaccc agtatcatgt atacaatgga 12180
catcaaatat actacaagca ctatagctag tggcataatt atagagaaat ataatgttaa 12240
cagtttaaca cgtggtgaga gaggacccac taaaccatgg gttggttcat ctacacaaga 12300
gaaaaaaaca atgccagttt ataatagaca agtcttaacc aaaaaacaga gagatcaaat 12360
agatctatta gcaaaattgg attgggtgta tgcatctata gataacaagg atgaattcat 12420
ggaagaactc agcataggaa cccttgggtt aacatatgaa aaagccaaga aattatttcc 12480
acaatattta agtgtcaact atttgcatcg acttacagtc agtagtagac catgtgaatt 12540
ccctgcatca ataccagctt atagaacaac aaattatcac tttgacacta gccctattaa 12600
tcgcatatta acagaaaagt atggtgatga agatattgac atagtattcc aaaactgtat 12660
aagctttggc cttagcttaa tgtcagtagt agaacaattt actaatgtat gtcctaacag 12720
aattattctc atacctaagc ttaatgagat acatttgatg aaacctccca tattcacagg 12780
tgatgttgat attcacaagt taaaacaagt gatacaaaaa cagcatatgt ttttaccaga 12840
caaaataagt ttgactcaat atgtagaatt attcttaagt aataaaacac tcaaatctgg 12900
atctcatgtt aattctaatt taatattggc acataaaata tctgactatt ttcataatac 12960
ttacatttta agtactaatt tagctggaca ttggattctg attatacaac ttatgaaaga 13020
ttctaagggt atttttgaaa aagattgggg agagggatat ataactgatc atatgtttat 13080
taatttgaaa gttttcttca atgcctataa gacctatctc ttgtgttttc ataaaggtta 13140
tggcaaagca aagctggagt gtgatatgaa cacctcagat ctcctatgtg tattggaatt 13200
aatagacagt agttattgga aatctatgtc taaggtattt ttagaacaaa aagttatcaa 13260
atacattctt agccaagatg caagtttaca tagagtaaaa ggatgtcata gcttcaaatt 13320
atggtttctt aaacgtctta atgtagcaga attcacagtt tgcccttggg ttgttaacat 13380
agattatcat ccaacacata tgaaagcaat attaacttat atagatcttg ttagaatggg 13440
attgataaat atagatagaa tacacattaa aaataaacac aaattcaatg atgaatttta 13500
tacttctaat ctcttctaca ttaattataa cttctcagat aatactcatc tattaactaa 13560
acatataagg attgctaatt ctgaattaga aaataattac aacaaattat atcatcctac 13620
accagaaacc ctagagaata tactagccaa tccgattaaa agtaatgaca aaaagacact 13680
gaatgaatat tgtataggta aaaatgttga ctcaataatg ttaccattgt tatctaataa 13740
gaagcttatt aaatcgtctg caatgattag aaccaattac agcaaacaag atttgtataa 13800
tttattccct atggttgtga ttgatagaat tatagatcat tcaggcaata cagccaaatc 13860
caaccaactt tacactacta cttcccacca aatatcttta gtgcacaata gcacatcact 13920
ttactgcatg cttccttggc atcatattaa tagattcaat tttgtattta gttctacagg 13980
ttgtaaaatt agtatagagt atattttaaa agatcttaaa attaaagatc ccaattgtat 14040
agcattcata ggtgaaggag cagggaattt attattgcgt acagtagtgg aacttcatcc 14100
tgacataaga tatatttaca gaagtctgaa agattgcaat gatcatagtt tacctattga 14160
gtttttaagg ctgtacaatg gacatatcaa cattgattat ggtgaaaatt tgaccattcc 14220
tgctacagat gcaaccaaca acattcattg gtcttattta catataaagt ttgctgaacc 14280
tatcagtctt tttgtctgtg atgctgaatt gcctgtaaca gtcaattgga gtaaaattat 14340
aatagaatgg agcaagcatg taagaaagtg caagtactgt tcctcagtta ataaatgtat 14400
gttaatagta aaatatcatg ctcaagatga tattgatttc aaattagaca atataactat 14460
attaaaaact tatgtatgct taggcagtaa gttaaaggga tcggaggttt acttagtcat 14520
cacaataggt cctgcaaata tattcccagc atttaatgta gtacaaaatg ctaaattgat 14580
actatcaaga accaaaaatt tcatcatgcc taagaaagct gataaagagt ctattgatgc 14640
aaatattaaa agtttgatac cctttctttg ttaccctata acaaaaaaag gaattaatac 14700
tgcattgtca aaactaaaga gtgttgttag tggagatata ctatcatatt ctatagctgg 14760
acgtaatgaa gttttcagca ataaacttat aaatcataaa catatgaaca tcttaaaatg 14820
gttcaatcat gttttaaatt tcagatcaac agaattaaac tataaccatt tatatatggt 14880
agaatctaca tatccttacc taagtgaatt gttaaacagc ttgacaacca atgaacttaa 14940
aaaactgatt aaaatcacag gtagtctgtt atacaacttt cataatgaat aatgaataaa 15000
gatcttataa taaagattcc catagctata cactaccatt gtattaaatt atagttatta 15060
aaaattaaaa atcatataat tttttaaata acttttagtg aactaatcct aaagttatca 15120
ttttgatcta ggaggaataa atttaaatcc taatctaatt ggtttatatg tgtattaact 15180
aaactacgag atattagttt ttgac                                       15205



<210> 26
<211> 15205
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17

<220> 
<221> variation      
<222> (6538)...(6538)
<223> n = g or a

<220> 
<221> variation      
<222> (7115)...(7115)
<223> n = g or a

<220> 
<221> variation      
<222> (8937)...(8937)
<223> n = a or c

<220> 
<221> variation      
<222> (14656)...(14656)
<223> n = g or t

<400> 26
acgggaaaaa atgcgtacaa caaacttgcg taaaccaaaa aaatggggca aataagagtt 60
tgataagtac cacttaaatt taactccctt agttagagat gggcagcaat tcattgagta 120
tgataaaagt tagattacaa aatttgtttg acaatgatga agtagcattg ttaaaaataa 180
catgctatac tgataaatta atacatttaa ctaatgcttt ggctaaggca gtgatacata 240
caataaaatt gaatggcatt gtgtttgtgc atgttattac aagtagtgat atttgcccta 300
ataataatat tgtagtaaaa tccaatttca caacaatgcc agtactacaa aatggaggct 360
atatatggga aatgatggaa ttaacacatt gctctcaacc taatggtcta ctagatgaca 420
attgtgaaat taaattctcc aaaaaactaa gtgattcaac aatgaccaat tatatgaatc 480
aattatctga attgcttgga tttgatctta atccataaat tataattaat atcaactagc 540
taatcaatgt cactaacacc attagttaat ataaaactta acagaagaca aaaatggggc 600
aaataaatca attcagccaa cccaaccatg gacacgactc acaatgatac cacaccacaa 660
agactgatga tcacagatat gagaccattg tcacttgaga ccataataac atcactaacc 720
agagacatca taacacacaa atttatatac ttgataaatc atgaatgcat agtgagaaaa 780
cttgatgaaa gacaagccac atttacattc ctggtcaact atgaaatgaa actattgcac 840
aaagtaggaa gcactaaata taaaaaatat actgaataca acacaaaata tggcactttc 900
cctatgccga tattcatcaa tcatgatggg ttcttagaat gcattggcat taaacctaca 960
aagcatactc ccataatata caagtatgat ctcaatccat aaacttcaac acaatattca 1020
cacaatctaa aacaacaact ctatgcatga ctacactcca tagtccaaat ggagcctgaa 1080
aattatagta atttaaaatt aaggagagat ataagataga agatggggca aatacaaaga 1140
tggctcttag caaagtcaag ttgaatgata cactcaacaa agatcaactt ctgtcatcta 1200
gcaaatacac catccaacgg agcacaggag atagtattga tactcctaat tatgatgtgc 1260
agaaacacat caataagtta tgtggcatgt tattaatcac agaagatgct aatcataaat 1320
tcactgggtt aataggtatg ttatatgcga tgtctaggtt aggaagagaa gacaccataa 1380
aaatactcag agatgcggga tatcatgtaa aagcaaatgg agtagatgta acaacacatc 1440
gtcaagacat taatgggaaa gaaatgaaat ttgaagtgtt aacattggca agcttaacaa 1500
ctgaaattca aatcaacatt gaaatagaat ctagaaaatc ctacaaaaaa atgctaaaag 1560
aaatgggaga ggtagctcca gaatacaggc atgactctcc tgattgtggg atgataatat 1620
tatgtatagc agcattagta ataaccaaat tggcagcagg ggatagatct ggtcttacag 1680
ctgtgattag gagagctaat aatgtcttaa aaaatgaaat gaaacgttat aaaggcttac 1740
tacccaagga catagccaac agcttctatg aggtgtttga aaaacatccc cactttatag 1800
atgtttttgt tcattttggt atagcacaat cttctaccag aggtggcagt agagtcgaag 1860
ggatttttgc aggattgttt atgaatgcct atggtgcagg gcaagtgatg ttacggtggg 1920
gagtcttagc aaaatcagtt aaaaatatta tgttaggaca tgctagtgtg caagcagaaa 1980
tggaacaagt tgttgaggtt tatgaatatg cccaaaaatt gggtggtgaa gcaggattct 2040
accatatatt gaacaaccca aaagcttcat tattatcctt gactcaattt cctcacttct 2100
ccagtgtagt attaggcaat gctgctggcc taggcataat gggagagtac agaggtacac 2160
cgaggaatca agatctatat gatgcagcaa aggcatatgc tgaacaactc aaagaaaatg 2220
gtgtgattaa ctacagtgta ctagacttga cagcagaaga actagaggct atcaaacatc 2280
agcttaatcc aaaagataat gatgtagagc tttgagttaa taaaaaaatg gggcaaataa 2340
atcatcatgg aaaagtttgc tcctgaattc catggagaag atgcaaacaa cagggctact 2400
aaatttctag agtcaataaa gggcaaattc gcatcaccta aagatcccaa gaaaaaagat 2460
agtatcatat ctgtcaactc aatagatata gaagtaacca aagaaagccc tataacatca 2520
aattcaacta ttatcaaccc aacaaatgag acagatgata ctgcagggaa caagcccaat 2580
tatcaaagaa aacctctagt aagtttcaaa gaagacccca caccaagtga taatcccttt 2640
tctaaactat acaaagaaac catagaaaca tttgataaca atgaagaaga atccagctat 2700
tcatatgagg aaataaatga tcagacaaac gacaatataa cggcaagatt agataggatt 2760
gatgaaaagt taagtgaaat actaggaatg cttcacacat tagtggtggc aagtgcagga 2820
cctacatctg ctcgggatgg tataagagat gccatggttg gtttaagaga agaaatgata 2880
gaaaaaatca gaactgaagc attaatgacc aatgacagat tagaagctat ggcaagactc 2940
aggaatgagg aaagtgaaaa gatggcaaaa gacacatcag atgaagtatc tctaaatcca 3000
acatcagaga aattgaacaa cctgttggaa gggaatgata gtgacaatga tctatcactt 3060
gaagatttct gattagttac caatcttaac atcaaaacac aacaccaaca gaagaccaac 3120
aaactaacca acccaatcat ccaaccaaac atccatctgc caatcagcta agcagccaac 3180
aaaacaacca gccaatccaa aactagccac ccggaaaaaa tcgacaatat agttacaaaa 3240
aaagaaaggg tggggcaaat atggaaacat acgtgaacaa gcttcacgaa ggctccacat 3300
acacagctgc tgttcaatac aatgtcctag aaaaagacga tgaccctgca tcacttacaa 3360
tatgggtgcc catgttccaa tcatctatgc cagcagattt actcataaaa gaactagcta 3420
atgtcaacat actagtgaaa caaatatcca cacccaaggg accttcacta agagtcatga 3480
taaactcaag aagtgcagtg ctagcacaaa tgcccagcaa atttaccata agcgctaatg 3540
tgtccttaga tgaaagaagc aaactagcat atgatgtaac cacaccctgt gaaatcaagg 3600
catgcagtct aacatgccta aaatcaaaaa atatgttaac tacagttaaa gatctcacta 3660
tgaagacact caaccctaca catgatatta ttgctttatg tgaatttgaa aacatagtaa 3720
catcaaaaaa agtcataata ccaacatacc taagatccat cagtgtcaga aataaggatc 3780
tgaacacact tgaaaatata acaaccactg aattcaaaaa tgctatcaca aatgcaaaaa 3840
tcatccctta ctcaggatta ctattagtca tcacagtgac tgacaacaaa ggagcattca 3900
aatacataaa gccacaaagt caattcatag tagatcttgg agcttaccta gaaaaagaaa 3960
gtatatatta tgtcaccaca aattggaagc acacagctac aagatttgca atcaaaccta 4020
tggaagatta accttcttca actacatcag tgtgttaatt catacaaact ttctacctac 4080
attcttcact tcaccatcac aatcacaaac acttcgtggt tcaaccaatc aaacaaaact 4140
tatctaaagt cccagatcat cccaagtcat tgtttatcag atctagtact caaataagtt 4200
aataaaaaca tacacatggg gcaaataatc atcggagaaa atccaactaa tcacaatatc 4260
tgttaacata gacaagtcaa cacaccatac agaatcaacc gatggaaaat acatccataa 4320
caatagaatt ctcaagcaaa ttctggccct actttacact aatacacatg atcacaacaa 4380
taatctcttt actaatcata atctccatca tgattgcaat actaaacaaa ctttgtgaat 4440
ataacgtatt ccataacaaa acctttgagt taccaagagc tcgagtcaac acatagcatt 4500
catcaatcca acagctcaaa acagtaacct tgtatttaaa agtgaacaac ccctgcctct 4560
ttacaacacc ttatcaacgt cccaccatgc aaaccaccat ccatactata tagtagttaa 4620
ttaaaatagt cataacaatg aactaggata tcaagactaa caataacatt ggggcaaatg 4680
caaacatgtc caaaaacaaa gaccaacgca ctgctaagac actagaaagg acctgggaca 4740
ctctcaatca tttattattc atatcatcgt gcttatataa gttaaatctt aaatctgtag 4800
cacaaatcac attatccatt ttggcaatga taatctcaac ttcacttata attgcagcca 4860
tcatattcat tgcctcggca aaccacaaag tcacatcaac aactacaatc atacaagatg 4920
caacaagcca gatcaagaac acaaccccaa catacctcac ccagagtcct cagcttggaa 4980
tcagtccctc taatccgtct gaaattacat cacaaatcac caccatacta gcttcaacaa 5040
caccaggagt caagtcaacc ctgcaatcca caacagtcgg gaccaagaat acaacaacaa 5100
ctcaagcaca acccagcaag cccaccacaa aacaacgcca aaacaaacca ccaagcaaac 5160
ccaacaatga ttttcacttt gaagtgttca actttgtacc ctgcagcata tgcagcaaca 5220
atccaacctg ctgggccatc tgcaaaagaa tacccaacaa aaaaccagga aagaaaacca 5280
ccaccaagcc cacagaagaa ccaaccttca agacggccaa agaggatccc aaacctcaga 5340
ccactggatc gggggaggtg cccaccacca agcccacagg ggagccaact atcaacacca 5400
ccaaaacaaa catcacaact acactactca cctccaacac cacgagaaat ccagaactca 5460
caagtcaaat ggaaaccttc cactcaactt cctccgaagg taatccaagc ccttctcaag 5520
tctccataac atccgagtac ctatcacaac cttcatctcc acccaacaca ccacgctagt 5580
agttattaaa aaacatatta tcacagaaag ccatgaccaa ctcaaacaga atcaaaataa 5640
actctggggc aaataacaat ggagttgcca atcctcaaag cgaatgcaat taccacaatc 5700
ctcactgcag tcacattttg ttttgcttct agtcaaaaca tcactgaaga attttatcaa 5760
tcaacatgca gtgcagttag caaaggctat cttagtgctc taagaactgg ttggtatacc 5820
agtgttataa ctatagaatt aagtaatatc aaggaaaata agtgtaatgg aacagatgct 5880
aaggtaaaat tgataaaaca agaattagat aaatataaaa atgctgtaac agaattgcag 5940
ttgctaatgc aaagcacacc agcagcaaac aatcgagcca gaagagaact accaaggttt 6000
atgaattata cactcaacaa tgccaaaaaa accaatgtaa cattaagcaa aaaaaggaaa 6060
agaagatttc ttggtttttt gttaggagtt ggatctgcaa tcgccagtgg cattgctgta 6120
tctaaggtcc tacacctaga aggggaagtg aacaagatca aaagtgctct actatccaca 6180
aacaaggctg tagtcagctt atcaaatgga gttagtgtct taaccagcaa agtgttagac 6240
ctcaaaaatt atatagataa acaattgtta cctattgtga acaagcaaag ctgcagcata 6300
tcaaatatag aaactgtgat agagttccaa caaaagaaca acagactact agagattacc 6360
agggaattta gtgttaatgc aggtgtaact acacctgtaa gcacttacat gttgactaat 6420
agtgaattat tgtcattaat caatgatatg cctataacaa atgatcagaa gaagttaatg 6480
tccaacaatg ttcaaatagt tagacagcaa agttactcta tcatgtccat aataaaanag 6540
gaagtcttag catatgtagt acaattacca ctatatggtg ttatagatac accttgttgg 6600
aaattacaca catcccctct atgtacaacc aacacaaaag aagggtccaa catctgttta 6660
acaagaactg acagaggatg gtactgtgac aatgcaggat cagtctcttt cttcccacaa 6720
gctgaaacat gtaaagttca atcgaatcga gtattttgtg acacaatgaa cagtttaaca 6780
ttaccaagtg aagtaaatct ctgcaatgtt gacatattca atcccaaata tgattgtaaa 6840
attatgactt caaaaacaga tgtaagcagc tctgttatca catctctagg agccattgtg 6900
tcatgctatg gcaaaactaa atgtacagca tccaataaaa atcgtggaat cataaagaca 6960
ttttctaacg ggtgcgatta tgtatcaaat aaaggggtgg acactgtgtc tgtaggcaac 7020
acattatatt atgtaaataa gcaagaaggc aaaagtctct atgtaaaagg tgaaccaata 7080
ataaatttct atgacccatt agtattcccc tctgntgaat ttgatgcatc aatatctcaa 7140
gtcaacgaga agattaacca gagcctggca tttattcgta aatccgatga attattacat 7200
aatgtaaatg ctggtaaatc caccacaaac atcatgataa ctgctataat tatagtgatt 7260
gtagtaatat tattatcatt aattgctgta ggactgctcc tatactgtaa ggccagaagc 7320
acaccagtca cactaagcaa agatcaactg agtggtataa ataatattgc atttagtaac 7380
taaataaaat agcatctaat catgttctta cgatggttta ctatctactc atagacagcc 7440
catctgtcat tggattttcc taaaatctga acttcatcga aactctcatc tataaaccat 7500
ctcacttaca ctatttaagt agattcctag ttcatagtta tataaaacat aattgaatgc 7560
cagattaact tactatctga aaaaatgaaa actggggcaa atatgtcacg aaggaatcct 7620
tgcaaatttg aaattcgagg tcattgctta aatggtaaga ggtgtcattt tagtcataat 7680
tattttgaat ggccacccca tgcactgctt gtaagacaaa actttatgtt aaacagaata 7740
cttaagtcta tggataaaag tatagatacc ttatcagaaa taagtggagc tgcagagttg 7800
gacagaacag aagagtatgc tcttggtgta gttggagtgc tagagagtta tataggatca 7860
ataaacaata taactaaaca atcagcatgt gttgccatga gcaaactcct cactgaactc 7920
aatagtgatg atatcaaaaa gctgagggac aatgaagagc taaattcacc caagataaga 7980
gtgtacaata ctgtcatatc atatattgaa agcaacagga aaaacaataa acaaactatc 8040
catctgttaa aaagattgcc agcagacgtg ttgaagaaaa ccatcaaaaa cacattggat 8100
atccataaga gcataaccat caacaaccca aaagaattaa ctgttagtga tacaaatgac 8160
catgccaaaa ataatgatac tacctgacaa atatccttgt agtataactt ccatactaat 8220
tacaagtaga tgtagagtta ctatgtataa tcaaaagaac acactatatt tcaatcaaaa 8280
caatccaaat aaccatatgt actcactaaa tcaaacattc aatgaaatcc attggacctc 8340
tcaagatttg attgacacaa ttcaaaattt tctacaacat ctaggtatta ctgaggatat 8400
atatacaata tatatattag tgtcataaca ctcaattcta acacttacaa catcgttaca 8460
ttattaaatc aaacaattca agttgtggga caaaatggat cccattatta atggaaattc 8520
tgctaatgtt tatctaaccg atagttattt aaaaggtgtt atctctttct cagagtgtaa 8580
tgctttagga agctacatat tcaatggtcc ttatctcaaa aatgattata ccaacttaat 8640
tagtagacaa aatccattaa tagaacacat gaatctaaag aaactaaata taacacagtc 8700
cttaatatct aagtatcata aaggtgaaat aaaattagaa gaaccgactt attttcagtc 8760
attacttatg acatacaaga gtatgacctc gtcagaacag attgctacca ctaatttact 8820
taaaaagata ataagaagag ctatagaaat aagtgatgtc aaagtctatg ctatattgaa 8880
taaactaggg cttaaagaaa aggacaagat taaatccaac aatggacaag atgaagncaa 8940
ttcagttatt acgaccataa tcaaagatga tatactttca gctgttaaag ataatcaatc 9000
tcatcttaaa gcaggcaaaa atcactctac aaaacaaaaa gacacaatca aaacaacact 9060
cctgaagaaa ttgatgtgtt caatgcaaca tcctccatca tggttaatac attggtttaa 9120
cttatacaca aaattaaaca acatattaac acagtatcga tcaaatgagg taaaaaacca 9180
tgggtttaca ttgatagata atcaaactct tagtggattt caatttattt tgaaccaata 9240
tggttgtata gtttataata aggaactcaa aagaattact gtgacaacct ataatcaatt 9300
cttgacatgg aaagatatta gccttagtag attaaatgtt tgtttaatta catggattag 9360
taactgcttg aacacattaa ataaaagctt aggcttaaga tgcggattca ataatgttat 9420
cttaacacaa ctattccttt atggagattg tatactaaaa ctatttcaca atgaggggtt 9480
ctacataata aaagaggtag agggatttat tatgtctcta attttaaata taacagaaga 9540
agatcaattc agaaaacgat tttataatag tatgctcaac aacatcacag atgctgctaa 9600
taaagctcag aaaaatctgc tatcaagagt atgtcataca ttattagata agacagtatc 9660
cgataatata ataaatggca gatggataat tctattaagt aagttcctta aattaattaa 9720
gcttgcgggt gacaataacc ttaacaatct gagtgaacta tattttttgt tcagaatatt 9780
tggacaccca atggtagatg aaagacaagc catggatgct gttaaaatta attgcaatga 9840
gaccaaattt tacttgctaa gcagtctaag tatgttaaga ggtgccttta tatatagaat 9900
tataaaaggg tttgtaaata attacaacag atggcctact ttaagaaatg ctattgtttt 9960
acccttaaga tggttaactt actataaact aaacacttat ccttctttgt tggaacttac 10020
agaaagagat ttgattgtgt tatcaggact acgtttctat cgtgagtttc ggttgcctaa 10080
aaaagtggat cttgaaatga ttataaatga taaagctata tcacctccta aaaatttgat 10140
atggactagt ttccctagaa attacatgcc atcacacata caaaactata tagaacatga 10200
aaaattaaaa ttttccgaga gtgataaatc aagaagagta ttagagtatt atttaagaga 10260
taacaagttc aatgaatgtg atttatacaa ctgtgtagtt gatcaaagtt atctaaacaa 10320
ccctaatcat gtggtatcat tgacaggcaa agaaagagaa ctcagtgtag gtagaatgtt 10380
tgcaatgcaa ccgggaatgt tcagacaggt tcaaatatta gcagagaaaa tgatagctga 10440
aaacatttta caattctttc ctgaaagtct tacaagatat ggtgatctag aactacaaaa 10500
aatattagaa ttgaaagcag gaataagtaa caaatcaaat cgctacaatg acaattacaa 10560
caattacatt agtaagtgct ctatcatcac agatctcagc aaattcaatc aagcatttcg 10620
atatgaaacg tcatgtattt gtagtgatgt gcttgatgaa ctgcatggtg tacaatctct 10680
attttcctgg ttacatttaa ctattcctca tgttacaata atatgtacat ataggcatgc 10740
acccccctat ataggagatc atattgtaga tcttaacaat gtagatgaac aaagtggatt 10800
atatagatat cacatgggtg gcatcgaagg gtggtgtcaa aaactatgga ccatagaagc 10860
tatatcacta ttggatctaa tatctctcaa agggaaattc tcaattactg ctttaattaa 10920
tggtgacaat caatcaatag atataagcaa accaattaga ctcatggaag gtcaaactca 10980
tgctcaagca gattatttgc tagcattaaa tagccttaaa ttactgtata aagagtatgc 11040
aggcataggc cacaaattaa aaggaactga gacttatata tcacgagata tgcaatttat 11100
gagtaaaaca attcaacata acggtgtgta ttacccagct agtataaaga aagtcctaag 11160
agtgggaccg tggataaaca ctatacttga tgatttcaaa gtgagtttag aatctatagg 11220
tagtttgaca caagaattag aatatagagg tgaaagtcta ttatgcagtt taatatttag 11280
aaatgtatgg ttatataatc agattgctct acaattaaaa aatcatgcat tatgtaacaa 11340
taaactatat ttggacatat taaaggttct gaaacactta aaaacctttt ttaatcttga 11400
taatattgat acagcattaa cattgtatat gaatttacct atgttatttg gtggtggtga 11460
tcccaacttg ttatatcgaa gtttctatag aagaaccccc gacttcctca cagaggctat 11520
agttcactct gtgttcatac ttagttatta tacaaaccat gacttaaaag ataaacttca 11580
agatctgtca gatgatagat tgaataagtt cttaacatgc ataatcacgt ttgacaaaaa 11640
ccctaacgct gaattcgtaa cattgatgag agatcctcaa gctttagggt ctgagagaca 11700
agctaaaatt actagcgaaa tcaataggct ggcagttaca gaggttttga gtacagctcc 11760
aaacaaaata ttctccaaaa gtgcacaaca ttataccact acagagatag atctaaatga 11820
tattatgcaa aatatagaac ctacatatcc tcatgggcta agagttgttt atgaaagttt 11880
acccttttat aaagcagaga aaatagtaaa tcttatatca ggtacaaaat ctataactaa 11940
catactggaa aaaacttctg ccatagactt aacagatatt gatagagcca ctgagatgat 12000
gaggaaaaac ataactttgc ttataaggat acttccattg gattgtaaca gagataaaag 12060
agagatattg agtatggaaa acctaagtat tactgaatta agcaaatatg ttagggaaag 12120
atcttggtct ttattcaata tagttggtgt tacatcaccc agtatcatgt atacaatgga 12180
catcaaatat actacaagca ctatagctag tggcataatt atagagaaat ataatgttaa 12240
cagtttaaca cgtggtgaga gaggacccac taaaccatgg gttggttcat ctacacaaga 12300
gaaaaaaaca atgccagttt ataatagaca agtcttaacc aaaaaacaga gagatcaaat 12360
agatctatta gcaaaattgg attgggtgta tgcatctata gataacaagg atgaattcat 12420
ggaagaactc agcataggaa cccttgggtt aacatatgaa aaagccaaga aattatttcc 12480
acaatattta agtgtcaact atttgcatcg acttacagtc agtagtagac catgtgaatt 12540
ccctgcatca ataccagctt atagaacaac aaattatcac tttgacacta gccctattaa 12600
tcgcatatta acagaaaagt atggtgatga agatattgac atagtattcc aaaactgtat 12660
aagctttggc cttagcttaa tgtcagtagt agaacaattt actaatgtat gtcctaacag 12720
aattattctc atacctaagc ttaatgagat acatttgatg aaacctccca tattcacagg 12780
tgatgttgat attcacaagt taaaacaagt gatacaaaaa cagcatatgt ttttaccaga 12840
caaaataagt ttgactcaat atgtagaatt attcttaagt aataaaacac tcaaatctgg 12900
atctcatgtt aattctaatt taatattggc acataaaata tctgactatt ttcataatac 12960
ttacatttta agtactaatt tagctggaca ttggattctg attatacaac ttatgaaaga 13020
ttctaagggt atttttgaaa aagattgggg agagggatat ataactgatc atatgtttat 13080
taatttgaaa gttttcttca atgcctataa gacctatctc ttgtgttttc ataaaggtta 13140
tggcaaagca aagctggagt gtgatatgaa cacctcagat ctcctatgtg tattggaatt 13200
aatagacagt agttattgga aatctatgtc taaggtattt ttagaacaaa aagttatcaa 13260
atacattctt agccaagatg caagtttaca tagagtaaaa ggatgtcata gcttcaaatt 13320
atggtttctt aaacgtctta atgtagcaga attcacagtt tgcccttggg ttgttaacat 13380
agattatcat ccaacacata tgaaagcaat attaacttat atagatcttg ttagaatggg 13440
attgataaat atagatagaa tacacattaa aaataaacac aaattcaatg atgaatttta 13500
tacttctaat ctcttctaca ttaattataa cttctcagat aatactcatc tattaactaa 13560
acatataagg attgctaatt ctgaattaga aaataattac aacaaattat atcatcctac 13620
accagaaacc ctagagaata tactagccaa tccgattaaa agtaatgaca aaaagacact 13680
gaatgaatat tgtataggta aaaatgttga ctcaataatg ttaccattgt tatctaataa 13740
gaagcttatt aaatcgtctg caatgattag aaccaattac agcaaacaag atttgtataa 13800
tttattccct atggttgtga ttgatagaat tatagatcat tcaggcaata cagccaaatc 13860
caaccaactt tacactacta cttcccacca aatatcttta gtgcacaata gcacatcact 13920
ttactgcatg cttccttggc atcatattaa tagattcaat tttgtattta gttctacagg 13980
ttgtaaaatt agtatagagt atattttaaa agatcttaaa attaaagatc ccaattgtat 14040
agcattcata ggtgaaggag cagggaattt attattgcgt acagtagtgg aacttcatcc 14100
tgacataaga tatatttaca gaagtctgaa agattgcaat gatcatagtt tacctattga 14160
gtttttaagg ctgtacaatg gacatatcaa cattgattat ggtgaaaatt tgaccattcc 14220
tgctacagat gcaaccaaca acattcattg gtcttattta catataaagt ttgctgaacc 14280
tatcagtctt tttgtctgtg atgctgaatt gcctgtaaca gtcaattgga gtaaaattat 14340
aatagaatgg agcaagcatg taagaaagtg caagtactgt tcctcagtta ataaatgtat 14400
gttaatagta aaatatcatg ctcaagatga tattgatttc aaattagaca atataactat 14460
attaaaaact tatgtatgct taggcagtaa gttaaaggga tcggaggttt acttagtcat 14520
cacaataggt cctgcaaata tattcccagc atttaatgta gtacaaaatg ctaaattgat 14580
actatcaaga accaaaaatt tcatcatgcc taagaaagct gataaagagt ctattgatgc 14640
aaatattaaa agtttnatac cctttctttg ttaccctata acaaaaaaag gaattaatac 14700
tgcattgtca aaactaaaga gtgttgttag tggagatata ctatcatatt ctatagctgg 14760
acgtaatgaa gttttcagca ataaacttat aaatcataaa catatgaaca tcttaaaatg 14820
gttcaatcat gttttaaatt tcagatcaac agaattaaac tataaccatt tatatatggt 14880
agaatctaca tatccttacc taagtgaatt gttaaacagc ttgacaacca atgaacttaa 14940
aaaactgatt aaaatcacag gtagtctgtt atacaacttt cataatgaat aatgaataaa 15000
gatcttataa taaagattcc catagctata cactaccatt gtattcaatt atagttatta 15060
aaaattaaaa atcatataat tttttaaata acttttagtg aactaatcct aaagttatca 15120
ttttgatcta ggaggaataa atttaaatcc taatctaatt ggtttatatg tgtattaact 15180
aaactacgag atattagttt ttgac                                       15205



<210> 27
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 27
acgggaaaaa atgcgtacaa caaac                                       25

<210> 28
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 28
gtgtagtcat gcatagagtt gttgttttag attgtgtgaa                       40

<210> 29
<211> 31
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 29
tatcaactag ctaatcaatg tcactaacac c                                31

<210> 30
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 30
cctctcccat ttcttttagc atttt                                       25

<210> 31
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 31
ttcacacaat ctaaaacaac aactctatgc atgactacac                       40

<210> 32
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 32
tttgggcata ttcataaacc tcaac                                       25

<210> 33
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 33
aatcccacaa aaaaatgcta aaagaaatgg gagaggtagc                       40

<210> 34
<211> 31
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 34
ctgtctcatt tgttgggttg ataatagttg a                                31

<210> 35
<211> 33
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 35
tatgaatatg cccaaaaatt gggtggtgaa gca                              33

<210> 36
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 36
tggctggttg ttttgttggc tgctt                                       25

<210> 37
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 37
gccctataac atcaaattca actattatca accc                             34

<210> 38
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 38
cgcttatggt aaatttgctg ggcat                                       25

<210> 39
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 39
acatcagaga aattgaacaa cctgt                                       25

<210> 40
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 40
ttgtagctgt gtgcttccaa tttgt                                       25

<210> 41
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 41
ctagcacaaa tgcccagcaa atttaccata agcg                             34

<210> 42
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 42
gtggtttgca tggtgggacg ttgat                                       25

<210> 43
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 43
agatttgcaa tcaaacctat ggaag                                       25

<210> 44
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 44
ttcagacgga ttagagggac tgatt                                       25

<210> 45
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 45
catcaatcca acagctcaaa acagt                                       25

<210> 46
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 46
taccttcgga ggaagttgag tggaa                                       25

<210> 47
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 47
gaaattacat caacaaatca ccacca                                      26

<210> 48
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 48
aaaccttggt agttctcttc tggct                                       25

<210> 49
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 49
taatccaagc ccttctcaag tctcc                                       25

<210> 50
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 50
gatgtgtgta atttccaaca aggtg                                       25

<210> 51
<211> 31
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 51
cactcaacaa tgccaaaaaa accaatgtaa c                                31

<210> 52
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 52
gcatcaaatt caccagaggg gaata                                       25

<210> 53
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 53
tagacagcaa agttactcta tcatg                                       25

<210> 54
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 54
gatggtttat agatgagagt ttcga                                       25

<210> 55
<211> 33
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 55
acactgtgtc tgtaggcaac acattatatt atg                              33

<210> 56
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 56
gtctgctggc aatcttttta acagatggat agtttgttta                       40

<210> 57
<211> 39
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 57
tgccagatta acttactatc tgaaaaatga aaactgggg                        39

<210> 58
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 58
cactctgaga aagagataac accttttaaa taactatcgg                       40

<210> 59
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 59
taaacaaact atccatctgt taaaaagatt gccagcagac                       40

<210> 60
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 60
gagtgatttt tgcctgcttt aagat                                       25

<210> 61
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 61
ggaaattctg ctaatgttta tctaaccg                                    28

<210> 62
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 62
cgttttctga attgatcttc ttctg                                       25

<210> 63
<211> 31
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 63
tcatcttaaa gcaggcaaaa atcactctac a                                31

<210> 64
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 64
cgtagtcctg ataacacaat caaatctctt tctgtaagtt                       40

<210> 65
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 65
cagaagaaga tcaattcaga aaacg                                       25

<210> 66
<211> 27
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 66
gcgatttgat ttgttactta ttcctgc                                     27

<210> 67
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 67
ccttctttgt tggaacttac agaaa                                       25

<210> 68
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 68
gcaaataatc tgcttgagca tgagt                                       25

<210> 69
<211> 31
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 69
gaaagcagga ataagtaaca aatcaaatcg c                                31

<210> 70
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 70
cgttagggtt tttgtcaaac gtgattatgc atgttaagaa                       40

<210> 71
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 71
atagccttaa attactgtat aaagagtatg caggcatagg                       40

<210> 72
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 72
tttttcctca tcatctcagt ggctc                                       25

<210> 73
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 73
gacttcctca cagaggctat agttc                                       25

<210> 74
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 74
gtaagtcgat gcaaatagtt gacac                                       25

<210> 75
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 75
actttgctta taaggatact tccattgg                                    28

<210> 76
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 76
ctctccccaa tctttttcaa aaataccctt agaatctttc                       40

<210> 77
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 77
atttgcatcg acttacagtc agtag                                       25

<210> 78
<211> 27
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 78
gggtttctgg tgtaggatga tataatt                                     27

<210> 79
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 79
gaaagattct aagggtattt ttgaaaaaga ttggggagag                       40

<210> 80
<211> 36
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 80
ccttcaccta tgaatgcata acaattggga tcttta                           36

<210> 81
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 81
ttacaacaaa ttatatcatc ctacaccaga aaccctagag                       40

<210> 82
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 82
cagctttctt aggcatgatg aaatttttgg ttcttgatag                       40

<210> 83
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 83
attaaagatc ccaattgtat agcattcata ggtgaaggag                       40

<210> 84
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 84
ggttgtcaag ctgtttaaca attca                                       25

<210> 85
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 85
tcggaggttt acttagtcat cacaa                                       25

<210> 86
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> oligonucleotide primer

<400> 86
ggtagtgtat agctatggga atctttat                                    28

<210> 87
<211> 420
<212> DNA
<213> Respiratory syncytial virus, S2

<400> 87
atgggcagca attcattgag tatgataaaa gttagattac aaaatttgtt tgacaatgat 60
gaagtagcat tgttaaaaat aacatgctat actgacaaat taatacattt aactaatgct 120
ttggctaagg cagtgataca tacaatcaaa ttgaatggca ttgtgtttgt gcatgttatt 180
acaagtagtg atatttgccc taacaataat attgtagtaa aatccaattt cacaacaatg 240
ccagtactac aaaatggagg ttatatatgg gaaatgatgg aattaacaca ttgctctcaa 300
cctaatggtc tactagatga caattgtgaa attaaattct ccaaaaaact aagtgattca 360
acaatgacca attatatgaa tcaattatct gaattacttg gatttgatct taatccataa 420


<210> 88
<211> 139
<212> PRT
<213> Respiratory syncytial virus

<400> 88
Met Gly Ser Asn Ser Leu Ser Met Ile Lys Val Arg Leu Gln Asn Leu
 1               5                  10                  15      
Phe Asp Asn Asp Glu Val Ala Leu Leu Lys Ile Thr Cys Tyr Thr Asp
            20                  25                  30          
Lys Leu Ile His Leu Thr Asn Ala Leu Ala Lys Ala Val Ile His Thr
        35                  40                  45              
Ile Lys Leu Asn Gly Ile Val Phe Val His Val Ile Thr Ser Ser Asp
    50                  55                  60                  
Ile Cys Pro Asn Asn Asn Ile Val Val Lys Ser Asn Phe Thr Thr Met
65                  70                  75                  80  
Pro Val Leu Gln Asn Gly Gly Tyr Ile Trp Glu Met Met Glu Leu Thr
                85                  90                  95      
His Cys Ser Gln Pro Asn Gly Leu Leu Asp Asp Asn Cys Glu Ile Lys
            100                 105                 110         
Phe Ser Lys Lys Leu Ser Asp Ser Thr Met Thr Asn Tyr Met Asn Gln
        115                 120                 125             
Leu Ser Glu Leu Leu Gly Phe Asp Leu Asn Pro
    130                 135                 


<210> 89
<211> 420
<212> DNA
<213> Respiratory syncytial virus, strain 287 and p17

<400> 89
atgggcagca attcattgag tatgataaaa gttagattac aaaatttgtt tgacaatgat 60
gaagtagcat tgttaaaaat aacatgctat actgataaat taatacattt aactaatgct 120
ttggctaagg cagtgataca tacaataaaa ttgaatggca ttgtgtttgt gcatgttatt 180
acaagtagtg atatttgccc taataataat attgtagtaa aatccaattt cacaacaatg 240
ccagtactac aaaatggagg ctatatatgg gaaatgatgg aattaacaca ttgctctcaa 300
cctaatggtc tactagatga caattgtgaa attaaattct ccaaaaaact aagtgattca 360
acaatgacca attatatgaa tcaattatct gaattgcttg gatttgatct taatccataa 420


<210> 90
<211> 420
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17_pp

<400> 90
atgggcagca attcattgag tatgataaaa gttagattac aaaatttgtt tgacaatgat 60
gaagtagcat tgttaaaaat aacatgctat actgataaat taatacattt aactaatgct 120
ttggctaagg cagtgataca tacaataaaa ttgaatggca tagtgtttgt gcatgttatt 180
acaagtagtg atatttgccc taataataat attgtagtaa aatccaattt cacaacaatg 240
ccagtactac aaaatggagg ctatatatgg gaaatgatgg aattaacaca ttgctctcaa 300
cctaatggtc tactagatga caattgtgaa attaaattct ccaaaaaact aagtgattca 360
acaatgacca attatatgaa tcaattatct gaattgcttg gatttgatct taatccataa 420


<210> 91
<211> 15205
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17_pp

<400> 91
acgggaaaaa atgcgtacaa caaacttgcg taaaccaaaa aaatggggca aataagagtt 60
tgataagtac cacttaaatt taactccctt agttagagat gggcagcaat tcattgagta 120
tgataaaagt tagattacaa aatttgtttg acaatgatga agtagcattg ttaaaaataa 180
catgctatac tgataaatta atacatttaa ctaatgcttt ggctaaggca gtgatacata 240
caataaaatt gaatggcata gtgtttgtgc atgttattac aagtagtgat atttgcccta 300
ataataatat tgtagtaaaa tccaatttca caacaatgcc agtactacaa aatggaggct 360
atatatggga aatgatggaa ttaacacatt gctctcaacc taatggtcta ctagatgaca 420
attgtgaaat taaattctcc aaaaaactaa gtgattcaac aatgaccaat tatatgaatc 480
aattatctga attgcttgga tttgatctta atccataaat tataattaat atcaactagc 540
taatcaatgt cactaacacc attagttaat ataaaactta acagaagaca aaaatggggc 600
aaataaatca attcagccaa cccaaccatg gacacgactc acaatgatac cacaccacaa 660
agactgatga tcacagatat gagaccattg tcacttgaga ccataataac atcactaacc 720
agagacatca taacacacaa atttatatac ttgataaatc atgaatgcat agtgagaaaa 780
cttgatgaaa gacaagccac atttacattc ctggtcaact atgaaatgaa actattgcac 840
aaagtaggaa gcactaaata taaaaaatat actgaataca acacaaaata tggcactttc 900
cctatgccga tattcatcaa tcatgatggg ttcttagaat gcattggcat taaacctaca 960
aagcatactc ccataatata caagtatgat ctcaatccat aaacttcaac acaatattca 1020
cacaatctaa aacaacaact ctatgcatga ctacactcca tagtccaaat ggagcctgaa 1080
aattatagta atttaaaatt aaggagagat ataagataga agatggggca aatacaaaga 1140
tggctcttag caaagtcaag ttgaatgata cactcaacaa agatcaactt ctgtcatcta 1200
gcaaatacac catccaacgg agcacaggag atagtattga tactcctaat tatgatgtgc 1260
agaaacacat caataagtta tgtggcatgt tattaatcac agaagatgct aatcataaat 1320
tcactgggtt aataggtatg ttatatgcga tgtctaggtt aggaagagaa gacaccataa 1380
aaatactcag agatgcggga tatcatgtaa aagcaaatgg agtagatgta acaacacatc 1440
gtcaagacat taatgggaaa gaaatgaaat ttgaagtgtt aacattggca agcttaacaa 1500
ctgaaattca aatcaacatt gaaatagaat ctagaaaatc ctacaaaaaa atgctaaaag 1560
aaatgggaga ggtagctcca gaatacaggc atgactctcc tgattgtggg atgataatat 1620
tatgtatagc agcattagta ataaccaaat tggcagcagg ggatagatct ggtcttacag 1680
ctgtgattag gagagctaat aatgtcttaa aaaatgaaat gaaacgttat aaaggcttac 1740
tacccaagga catagccaac agcttctatg aggtgtttga aaaacatccc cactttatag 1800
atgtttttgt tcattttggt atagcacaat cttctaccag aggtggcagt agagtcgaag 1860
ggatttttgc aggattgttt atgaatgcct atggtgcagg gcaagtgatg ttacggtggg 1920
gagtcttagc aaaatcagtt aaaaatatta tgttaggaca tgctagtgtg caagcagaaa 1980
tggaacaagt tgttgaggtt tatgaatatg cccaaaaatt gggtggtgaa gcaggattct 2040
accatatatt gaacaaccca aaagcttcat tattatcctt gactcaattt cctcacttct 2100
ccagtgtagt attaggcaat gctgctggcc taggcataat gggagagtac agaggtacac 2160
cgaggaatca agatctatat gatgcagcaa aggcatatgc tgaacaactc aaagaaaatg 2220
gtgtgattaa ctacagtgta ctagacttga cagcagaaga actagaggct atcaaacatc 2280
agcttaatcc aaaagataat gatgtagagc tttgagttaa taaaaaaatg gggcaaataa 2340
atcatcatgg aaaagtttgc tcctgaattc catggagaag atgcaaacaa cagggctact 2400
aaatttctag agtcaataaa gggcaaattc gcatcaccta aagatcccaa gaaaaaagat 2460
agtatcatat ctgtcaactc aatagatata gaagtaacca aagaaagccc tataacatca 2520
aattcaacta ttatcaaccc aacaaatgag acagatgata ctgcagggaa caagcccaat 2580
tatcaaagaa aacctctagt aagtttcaaa gaagacccca caccaagtga taatcccttt 2640
tctaaactat acaaagaaac catagaaaca tttgataaca atgaagaaga atccagctat 2700
tcatatgagg aaataaatga tcagacaaac gacaatataa cggcaagatt agataggatt 2760
gatgaaaagt taagtgaaat actaggaatg cttcacacat tagtggtggc aagtgcagga 2820
cctacatctg ctcgggatgg tataagagat gccatggttg gtttaagaga agaaatgata 2880
gaaaaaatca gaactgaagc attaatgacc aatgacagat tagaagctat ggcaagactc 2940
aggaatgagg aaagtgaaaa gatggcaaaa gacacatcag atgaagtatc tctaaatcca 3000
acatcagaga aattgaacaa cctgttggaa gggaatgata gtgacaatga tctatcactt 3060
gaagatttct gattagttac caatcttaac atcaaaacac aacaccaaca gaagaccaac 3120
aaactaacca acccaatcat ccaaccaaac atccatctgc caatcagcta agcagccaac 3180
aaaacaacca gccaatccaa aactagccac ccggaaaaaa tcgacaatat agttacaaaa 3240
aaagaaaggg tggggcaaat atggaaacat acgtgaacaa gcttcacgaa ggctccacat 3300
acacagctgc tgttcaatac aatgtcctag aaaaagacga tgaccctgca tcacttacaa 3360
tatgggtgcc catgttccaa tcatctatgc cagcagattt actcataaaa gaactagcta 3420
atgtcaacat actagtgaaa caaatatcca cacccaaggg accttcacta agagtcatga 3480
taaactcaag aagtgcagtg ctagcacaaa tgcccagcaa atttaccata agcgctaatg 3540
tgtccttaga tgaaagaagc aaactagcat atgatgtaac cacaccctgt gaaatcaagg 3600
catgcagtct aacatgccta aaatcaaaaa atatgttaac tacagttaaa gatctcacta 3660
tgaagacact caaccctaca catgatatta ttgctttatg tgaatttgaa aacatagtaa 3720
catcaaaaaa agtcataata ccaacatacc taagatccat cagtgtcaga aataaggatc 3780
tgaacacact tgaaaatata acaaccactg aattcaaaaa tgctatcaca aatgcaaaaa 3840
tcatccctta ctcaggatta ctattagtca tcacagtgac tgacaacaaa ggagcattca 3900
aatacataaa gccacaaagt caattcatag tagatcttgg agcttaccta gaaaaagaaa 3960
gtatatatta tgtcaccaca aattggaagc acacagctac aagatttgca atcaaaccta 4020
tggaagatta accttcttca actacatcag tgtgttaatt catacaaact ttctacctac 4080
attcttcact tcaccatcac aatcacaaac acttcgtggt tcaaccaatc aaacaaaact 4140
tatctaaagt cccagatcat cccaagtcat tgtttatcag atctagtact caaataagtt 4200
aataaaaaca tacacatggg gcaaataatc atcggagaaa atccaactaa tcacaatatc 4260
tgttaacata gacaagtcaa cacaccatac agaatcaacc gatggaaaat acatccataa 4320
caatagaatt ctcaagcaaa ttctggccct actttacact aatacacatg atcacaacaa 4380
taatctcttt actaatcata atctccatca tgattgcaat actaaacaaa ctttgtgaat 4440
ataacgtatt ccataacaaa acctttgagt taccaagagc tcgagtcaac acatagcatt 4500
catcaatcca acagctcaaa acagtaacct tgtatttaaa agtgaacaac ccctgcctct 4560
ttacaacacc ttatcaacgt cccaccatgc aaaccaccat ccatactata tagtagttaa 4620
ttaaaatagt cataacaatg aactaggata tcaagactaa caataacatt ggggcaaatg 4680
caaacatgtc caaaaacaaa gaccaacgca ctgctaagac actagaaagg acctgggaca 4740
ctctcaatca tttattattc atatcatcgt gcttatataa gttaaatctt aaatctgtag 4800
cacaaatcac attatccatt ttggcaatga taatctcaac ttcacttata attgcagcca 4860
tcatattcat tgcctcggca aaccacaaag tcacatcaac aactacaatc atacaagatg 4920
caacaagcca gatcaagaac acaaccccaa catacctcac ccagagtcct cagcttggaa 4980
tcagtccctc taatccgtct gaaattacat cacaaatcac caccatacta gcttcaacaa 5040
caccaggagt caagtcaacc ctgcaatcca caacagtcgg gaccaagaat acaacaacaa 5100
ctcaagcaca acccagcaag cccaccacaa aacaacgcca aaacaaacca ccaagcaaac 5160
ccaacaatga ttttcacttt gaagtgttca actttgtacc ctgcagcata tgcagcaaca 5220
atccaacctg ctgggccatc tgcaaaagaa tacccaacaa aaaaccagga aagaaaacca 5280
ccaccaagcc cacagaagaa ccaaccttca agacggccaa agaggatccc aaacctcaga 5340
ccactggatc gggggaggtg cccaccacca agcccacagg ggagccaact atcaacacca 5400
ccaaaacaaa catcacaact acactactca cctccaacac cacgagaaat ccagaactca 5460
caagtcaaat ggaaaccttc cactcaactt cctccgaagg taatccaagc ccttctcaag 5520
tctccataac atccgagtac ctatcacaac cttcatctcc acccaacaca ccacgctagt 5580
agttattaaa aaacatatta tcacagaaag ccatgaccaa ctcaaacaga atcaaaataa 5640
actctggggc aaataacaat ggagttgcca atcctcaaag cgaatgcaat taccacaatc 5700
ctcactgcag tcacattttg ttttgcttct agtcaaaaca tcactgaaga attttatcaa 5760
tcaacatgca gtgcagttag caaaggctat cttagtgctc taagaactgg ttggtatacc 5820
agtgttataa ctatagaatt aagtaatatc aaggaaaata agtgtaatgg aacagatgct 5880
aaggtaaaat tgataaaaca agaattagat aaatataaaa atgctgtaac agaattgcag 5940
ttgctaatgc aaagcacacc agcagcaaac aatcgagcca gaagagaact accaaggttt 6000
atgaattata cactcaacaa tgccaaaaaa accaatgtaa cattaagcaa aaaaaggaaa 6060
agaagatttc ttggtttttt gttaggagtt ggatctgcaa tcgccagtgg cattgctgta 6120
tctaaggtcc tacacctaga aggggaagtg aacaagatca aaagtgctct actatccaca 6180
aacaaggctg tagtcagctt atcaaatgga gttagtgtct taaccagcaa agtgttagac 6240
ctcaaaaatt atatagataa acaattgtta cctattgtga acaagcaaag ctgcagcata 6300
tcaaatatag aaactgtgat agagttccaa caaaagaaca acagactact agagattacc 6360
agggaattta gtgttaatgc aggtgtaact acacctgtaa gcacttacat gttgactaat 6420
agtgaattat tgtcattaat caatgatatg cctataacaa atgatcagaa gaagttaatg 6480
tccaacaatg ttcaaatagt tagacagcaa agttactcta tcatgtccat aataaaaaag 6540
gaagtcttag catatgtagt acaattacca ctatatggtg ttatagatac accttgttgg 6600
aaattacaca catcccctct atgtacaacc aacacaaaag aagggtccaa catctgttta 6660
acaagaactg acagaggatg gtactgtgac aatgcaggat cagtctcttt cttcccacaa 6720
gctgaaacat gtaaagttca atcgaatcga gtattttgtg acacaatgaa cagtttaaca 6780
ttaccaagtg aagtaaatct ctgcaatgtt gacatattca atcccaaata tgattgtaaa 6840
attatgactt caaaaacaga tgtaagcagc tctgttatca catctctagg agccattgtg 6900
tcatgctatg gcaaaactaa atgtacagca tccaataaaa atcgtggaat cataaagaca 6960
ttttctaacg ggtgcgatta tgtatcaaat aaaggggtgg acactgtgtc tgtaggcaac 7020
acattatatt atgtaaataa gcaagaaggc aaaagtctct atgtaaaagg tgaaccaata 7080
ataaatttct atgacccatt agtattcccc tctggtgaat ttgatgcatc aatatctcaa 7140
gtcaacgaga agattaacca gagcctggca tttattcgta aatccgatga attattacat 7200
aatgtaaatg ctggtaaatc caccacaaac atcatgataa ctgctataat tatagtgatt 7260
gtagtaatat tattatcatt aattgctgta ggactgctcc tatactgtaa ggccagaagc 7320
acaccagtca cactaagcaa agatcaactg agtggtataa ataatattgc atttagtaac 7380
taaataaaat agcatctaat catgttctta cgatggttta ctatctactc atagacagcc 7440
catctgtcat tggattttcc taaaatctga acttcatcga aactctcatc tataaaccat 7500
ctcacttaca ctatttaagt agattcctag ttcatagtta tataaaacat aattgaatgc 7560
cagattaact tactatctga aaaaatgaaa actggggcaa atatgtcacg aaggaatcct 7620
tgcaaatttg aaattcgagg tcattgctta aatggtaaga ggtgtcattt tagtcataat 7680
tattttgaat ggccacccca tgcactgctt gtaagacaaa actttatgtt aaacagaata 7740
cttaagtcta tggataaaag tatagatacc ttatcagaaa taagtggagc tgcagagttg 7800
gacagaacag aagagtatgc tcttggtgta gttggagtgc tagagagtta tataggatca 7860
ataaacaata taactaaaca atcagcatgt gttgccatga gcaaactcct cactgaactc 7920
aatagtgatg atatcaaaaa gctgagggac aatgaagagc taaattcacc caagataaga 7980
gtgtacaata ctgtcatatc atatattgaa agcaacagga aaaacaataa acaaactatc 8040
catctgttaa aaagattgcc agcagacgtg ttgaagaaaa ccatcaaaaa cacattggat 8100
atccataaga gcataaccat caacaaccca aaagaattaa ctgttagtga tacaaatgac 8160
catgccaaaa ataatgatac tacctgacaa atatccttgt agtataactt ccatactaat 8220
tacaagtaga tgtagagtta ctatgtataa tcaaaagaac acactatatt tcaatcaaaa 8280
caatccaaat aaccatatgt actcactaaa tcaaacattc aatgaaatcc attggacctc 8340
tcaagatttg attgacacaa ttcaaaattt tctacaacat ctaggtatta ctgaggatat 8400
atatacaata tatatattag tgtcataaca ctcaattcta acacttacaa catcgttaca 8460
ttattaaatc aaacaattca agttgtggga caaaatggat cccattatta atggaaattc 8520
tgctaatgtt tatctaaccg atagttattt aaaaggtgtt atctctttct cagagtgtaa 8580
tgctttagga agctacatat tcaatggtcc ttatctcaaa aatgattata ccaacttaat 8640
tagtagacaa aatccattaa tagaacacat gaatctaaag aaactaaata taacacagtc 8700
cttaatatct aagtatcata aaggtgaaat aaaattagaa gaaccgactt attttcagtc 8760
attacttatg acatacaaga gtatgacctc gtcagaacag attgctacca ctaatttact 8820
taaaaagata ataagaagag ctatagaaat aagtgatgtc aaagtctatg ctatattgaa 8880
taaactaggg cttaaagaaa aggacaagat taaatccaac aatggacaag atgaagccaa 8940
ttcagttatt acgaccataa tcaaagatga tatactttca gctgttaaag ataatcaatc 9000
tcatcttaaa gcaggcaaaa atcactctac aaaacaaaaa gacacaatca aaacaacact 9060
cctgaagaaa ttgatgtgtt caatgcaaca tcctccatca tggttaatac attggtttaa 9120
cttatacaca aaattaaaca acatattaac acagtatcga tcaaatgagg taaaaaacca 9180
tgggtttaca ttgatagata atcaaactct tagtggattt caatttattt tgaaccaata 9240
tggttgtata gtttataata aggaactcaa aagaattact gtgacaacct ataatcaatt 9300
cttgacatgg aaagatatta gccttagtag attaaatgtt tgtttaatta catggattag 9360
taactgcttg aacacattaa ataaaagctt aggcttaaga tgcggattca ataatgttat 9420
cttaacacaa ctattccttt atggagattg tatactaaaa ctatttcaca atgaggggtt 9480
ctacataata aaagaggtag agggatttat tatgtctcta attttaaata taacagaaga 9540
agatcaattc agaaaacgat tttataatag tatgctcaac aacatcacag atgctgctaa 9600
taaagctcag aaaaatctgc tatcaagagt atgtcataca ttattagata agacagtatc 9660
cgataatata ataaatggca gatggataat tctattaagt aagttcctta aattaattaa 9720
gcttgcgggt gacaataacc ttaacaatct gagtgaacta tattttttgt tcagaatatt 9780
tggacaccca atggtagatg aaagacaagc catggatgct gttaaaatta attgcaatga 9840
gaccaaattt tacttgctaa gcagtctaag tatgttaaga ggtgccttta tatatagaat 9900
tataaaaggg tttgtaaata attacaacag atggcctact ttaagaaatg ctattgtttt 9960
acccttaaga tggttaactt actataaact aaacacttat ccttctttgt tggaacttac 10020
agaaagagat ttgattgtgt tatcaggact acgtttctat cgtgagtttc ggttgcctaa 10080
aaaagtggat cttgaaatga ttataaatga taaagctata tcacctccta aaaatttgat 10140
atggactagt ttccctagaa attacatgcc atcacacata caaaactata tagaacatga 10200
aaaattaaaa ttttccgaga gtgataaatc aagaagagta ttagagtatt atttaagaga 10260
taacaagttc aatgaatgtg atttatacaa ctgtgtagtt gatcaaagtt atctaaacaa 10320
ccctaatcat gtggtatcat tgacaggcaa agaaagagaa ctcagtgtag gtagaatgtt 10380
tgcaatgcaa ccgggaatgt tcagacaggt tcaaatatta gcagagaaaa tgatagctga 10440
aaacatttta caattctttc ctgaaagtct tacaagatat ggtgatctag aactacaaaa 10500
aatattagaa ttgaaagcag gaataagtaa caaatcaaat cgctacaatg acaattacaa 10560
caattacatt agtaagtgct ctatcatcac agatctcagc aaattcaatc aagcatttcg 10620
atatgaaacg tcatgtattt gtagtgatgt gcttgatgaa ctgcatggtg tacaatctct 10680
attttcctgg ttacatttaa ctattcctca tgttacaata atatgtacat ataggcatgc 10740
acccccctat ataggagatc atattgtaga tcttaacaat gtagatgaac aaagtggatt 10800
atatagatat cacatgggtg gcatcgaagg gtggtgtcaa aaactatgga ccatagaagc 10860
tatatcacta ttggatctaa tatctctcaa agggaaattc tcaattactg ctttaattaa 10920
tggtgacaat caatcaatag atataagcaa accaattaga ctcatggaag gtcaaactca 10980
tgctcaagca gattatttgc tagcattaaa tagccttaaa ttactgtata aagagtatgc 11040
aggcataggc cacaaattaa aaggaactga gacttatata tcacgagata tgcaatttat 11100
gagtaaaaca attcaacata acggtgtgta ttacccagct agtataaaga aagtcctaag 11160
agtgggaccg tggataaaca ctatacttga tgatttcaaa gtgagtttag aatctatagg 11220
tagtttgaca caagaattag aatatagagg tgaaagtcta ttatgcagtt taatatttag 11280
aaatgtatgg ttatataatc agattgctct acaattaaaa aatcatgcat tatgtaacaa 11340
taaactatat ttggacatat taaaggttct gaaacactta aaaacctttt ttaatcttga 11400
taatattgat acagcattaa cattgtatat gaatttacct atgttatttg gtggtggtga 11460
tcccaacttg ttatatcgaa gtttctatag aagaaccccc gacttcctca cagaggctat 11520
agttcactct gtgttcatac ttagttatta tacaaaccat gacttaaaag ataaacttca 11580
agatctgtca gatgatagat tgaataagtt cttaacatgc ataatcacgt ttgacaaaaa 11640
ccctaacgct gaattcgtaa cattgatgag agatcctcaa gctttagggt ctgagagaca 11700
agctaaaatt actagcgaaa tcaataggct ggcagttaca gaggttttga gtacagctcc 11760
aaacaaaata ttctccaaaa gtgcacaaca ttataccact acagagatag atctaaatga 11820
tattatgcaa aatatagaac ctacatatcc tcatgggcta agagttgttt atgaaagttt 11880
acccttttat aaagcagaga aaatagtaaa tcttatatca ggtacaaaat ctataactaa 11940
catactggaa aaaacttctg ccatagactt aacagatatt gatagagcca ctgagatgat 12000
gaggaaaaac ataactttgc ttataaggat acttccattg gattgtaaca gagataaaag 12060
agagatattg agtatggaaa acctaagtat tactgaatta agcaaatatg ttagggaaag 12120
atcttggtct ttattcaata tagttggtgt tacatcaccc agtatcatgt atacaatgga 12180
catcaaatat actacaagca ctatagctag tggcataatt atagagaaat ataatgttaa 12240
cagtttaaca cgtggtgaga gaggacccac taaaccatgg gttggttcat ctacacaaga 12300
gaaaaaaaca atgccagttt ataatagaca agtcttaacc aaaaaacaga gagatcaaat 12360
agatctatta gcaaaattgg attgggtgta tgcatctata gataacaagg atgaattcat 12420
ggaagaactc agcataggaa cccttgggtt aacatatgaa aaagccaaga aattatttcc 12480
acaatattta agtgtcaact atttgcatcg acttacagtc agtagtagac catgtgaatt 12540
ccctgcatca ataccagctt atagaacaac aaattatcac tttgacacta gccctattaa 12600
tcgcatatta acagaaaagt atggtgatga agatattgac atagtattcc aaaactgtat 12660
aagctttggc cttagcttaa tgtcagtagt agaacaattt actaatgtat gtcctaacag 12720
aattattctc atacctaagc ttaatgagat acatttgatg aaacctccca tattcacagg 12780
tgatgttgat attcacaagt taaaacaagt gatacaaaaa cagcatatgt ttttaccaga 12840
caaaataagt ttgactcaat atgtagaatt attcttaagt aataaaacac tcaaatctgg 12900
atctcatgtt aattctaatt taatattggc acataaaata tctgactatt ttcataatac 12960
ttacatttta agtactaatt tagctggaca ttggattctg attatacaac ttatgaaaga 13020
ttctaagggt atttttgaaa aagattgggg agagggatat ataactgatc atatgtttat 13080
taatttgaaa gttttcttca atgcctataa gacctatctc ttgtgttttc ataaaggtta 13140
tggcaaagca aagctggagt gtgatatgaa cacctcagat ctcctatgtg tattggaatt 13200
aatagacagt agttattgga aatctatgtc taaggtattt ttagaacaaa aagttatcaa 13260
atacattctt agccaagatg caagtttaca tagagtaaaa ggatgtcata gcttcaaatt 13320
atggtttctt aaacgtctta atgtagcaga attcacagtt tgcccttggg ttgttaacat 13380
agattatcat ccaacacata tgaaagcaat attaacttat atagatcttg ttagaatggg 13440
attgataaat atagatagaa tacacattaa aaataaacac aaattcaatg atgaatttta 13500
tacttctaat ctcttctaca ttaattataa cttctcagat aatactcatc tattaactaa 13560
acatataagg attgctaatt ctgaattaga aaataattac aacaaattat atcatcctac 13620
accagaaacc ctagagaata tactagccaa tccgattaaa agtaatgaca aaaagacact 13680
gaatgaatat tgtataggta aaaatgttga ctcaataatg ttaccattgt tatctaataa 13740
gaagcttatt aaatcgtctg caatgattag aaccaattac agcaaacaag atttgtataa 13800
tttattccct atggttgtga ttgatagaat tatagatcat tcaggcaata cagccaaatc 13860
caaccaactt tacactacta cttcccacca aatatcttta gtgcacaata gcacatcact 13920
ttactgcatg cttccttggc atcatattaa tagattcaat tttgtattta gttctacagg 13980
ttgtaaaatt agtatagagt atattttaaa agatcttaaa attaaagatc ccaattgtat 14040
agcattcata ggtgaaggag cagggaattt attattgcgt acagtagtgg aacttcatcc 14100
tgacataaga tatatttaca gaagtctgaa agattgcaat gatcatagtt tacctattga 14160
gtttttaagg ctgtacaatg gacatatcaa cattgattat ggtgaaaatt tgaccattcc 14220
tgctacagat gcaaccaaca acattcattg gtcttattta catataaagt ttgctgaacc 14280
tatcagtctt tttgtctgtg atgctgaatt gcctgtaaca gtcaattgga gtaaaattat 14340
aatagaatgg agcaagcatg taagaaagtg caagtactgt tcctcagtta ataaatgtat 14400
gttaatagta aaatatcatg ctcaagatga tattgatttc aaattagaca atataactat 14460
attaaaaact tatgtatgct taggcagtaa gttaaaggga tcggaggttt acttagtcat 14520
cacaataggt cctgcaaata tattcccagc atttaatgta gtacaaaatg ctaaattgat 14580
actatcaaga accaaaaatt tcatcatgcc taagaaagct gataaagagt ctattgatgc 14640
aaatattaaa agttttatac cctttctttg ttaccctata acaaaaaaag gaattaatac 14700
tgcattgtca aaactaaaga gtgttgttag tggagatata ctatcatatt ctatagctgg 14760
acgtaatgaa gttttcagca ataaacttat aaatcataaa catatgaaca tcttaaaatg 14820
gttcaatcat gttttaaatt tcagatcaac agaattaaac tataaccatt tatatatggt 14880
agaatctaca tatccttacc taagtgaatt gttaaacagc ttgacaacca atgaacttaa 14940
aaaactgatt aaaatcacag gtagtctgtt atacaacttt cataatgaat aatgaataaa 15000
gatcttataa taaagattcc catagctata cactaccatt gtattcaatt atagttatta 15060
aaaattaaaa atcatataat tttttaaata acttttagtg aactaatcct aaagttatca 15120
ttttgatcta ggaggaataa atttaaatcc taatctaatt ggtttatatg tgtattaact 15180
aaactacgag atattagttt ttgac                                       15205



<210> 92
<211> 1725
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17_pp

<400> 92
atggagttgc caatcctcaa agcgaatgca attaccacaa tcctcactgc agtcacattt 60
tgttttgctt ctagtcaaaa catcactgaa gaattttatc aatcaacatg cagtgcagtt 120
agcaaaggct atcttagtgc tctaagaact ggttggtata ccagtgttat aactatagaa 180
ttaagtaata tcaaggaaaa taagtgtaat ggaacagatg ctaaggtaaa attgataaaa 240
caagaattag ataaatataa aaatgctgta acagaattgc agttgctaat gcaaagcaca 300
ccagcagcaa acaatcgagc cagaagagaa ctaccaaggt ttatgaatta tacactcaac 360
aatgccaaaa aaaccaatgt aacattaagc aaaaaaagga aaagaagatt tcttggtttt 420
ttgttaggag ttggatctgc aatcgccagt ggcattgctg tatctaaggt cctacaccta 480
gaaggggaag tgaacaagat caaaagtgct ctactatcca caaacaaggc tgtagtcagc 540
ttatcaaatg gagttagtgt cttaaccagc aaagtgttag acctcaaaaa ttatatagat 600
aaacaattgt tacctattgt gaacaagcaa agctgcagca tatcaaatat agaaactgtg 660
atagagttcc aacaaaagaa caacagacta ctagagatta ccagggaatt tagtgttaat 720
gcaggtgtaa ctacacctgt aagcacttac atgttgacta atagtgaatt attgtcatta 780
atcaatgata tgcctataac aaatgatcag aagaagttaa tgtccaacaa tgttcaaata 840
gttagacagc aaagttactc tatcatgtcc ataataaaaa aggaagtctt agcatatgta 900
gtacaattac cactatatgg tgttatagat acaccttgtt ggaaattaca cacatcccct 960
ctatgtacaa ccaacacaaa agaagggtcc aacatctgtt taacaagaac tgacagagga 1020
tggtactgtg acaatgcagg atcagtctct ttcttcccac aagctgaaac atgtaaagtt 1080
caatcgaatc gagtattttg tgacacaatg aacagtttaa cattaccaag tgaagtaaat 1140
ctctgcaatg ttgacatatt caatcccaaa tatgattgta aaattatgac ttcaaaaaca 1200
gatgtaagca gctctgttat cacatctcta ggagccattg tgtcatgcta tggcaaaact 1260
aaatgtacag catccaataa aaatcgtgga atcataaaga cattttctaa cgggtgcgat 1320
tatgtatcaa ataaaggggt ggacactgtg tctgtaggca acacattata ttatgtaaat 1380
aagcaagaag gcaaaagtct ctatgtaaaa ggtgaaccaa taataaattt ctatgaccca 1440
ttagtattcc cctctggtga atttgatgca tcaatatctc aagtcaacga gaagattaac 1500
cagagcctgg catttattcg taaatccgat gaattattac ataatgtaaa tgctggtaaa 1560
tccaccacaa acatcatgat aactgctata attatagtga ttgtagtaat attattatca 1620
ttaattgctg taggactgct cctatactgt aaggccagaa gcacaccagt cacactaagc 1680
aaagatcaac tgagtggtat aaataatatt gcatttagta actaa                 1725

<210> 93
<211> 574
<212> PRT
<213> Respiratory syncytial virus, Merck strain p17_pp

<400> 93
Met Glu Leu Pro Ile Leu Lys Ala Asn Ala Ile Thr Thr Ile Leu Thr
 1               5                  10                  15      
Ala Val Thr Phe Cys Phe Ala Ser Ser Gln Asn Ile Thr Glu Glu Phe
            20                  25                  30          
Tyr Gln Ser Thr Cys Ser Ala Val Ser Lys Gly Tyr Leu Ser Ala Leu
        35                  40                  45              
Arg Thr Gly Trp Tyr Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile
    50                  55                  60                  
Lys Glu Asn Lys Cys Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys
65                  70                  75                  80  
Gln Glu Leu Asp Lys Tyr Lys Asn Ala Val Thr Glu Leu Gln Leu Leu
                85                  90                  95      
Met Gln Ser Thr Pro Ala Ala Asn Asn Arg Ala Arg Arg Glu Leu Pro
            100                 105                 110         
Arg Phe Met Asn Tyr Thr Leu Asn Asn Ala Lys Lys Thr Asn Val Thr
        115                 120                 125             
Leu Ser Lys Lys Arg Lys Arg Arg Phe Leu Gly Phe Leu Leu Gly Val
    130                 135                 140                 
Gly Ser Ala Ile Ala Ser Gly Ile Ala Val Ser Lys Val Leu His Leu
145                 150                 155                 160 
Glu Gly Glu Val Asn Lys Ile Lys Ser Ala Leu Leu Ser Thr Asn Lys
                165                 170                 175     
Ala Val Val Ser Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val
            180                 185                 190         
Leu Asp Leu Lys Asn Tyr Ile Asp Lys Gln Leu Leu Pro Ile Val Asn
        195                 200                 205             
Lys Gln Ser Cys Ser Ile Ser Asn Ile Glu Thr Val Ile Glu Phe Gln
    210                 215                 220                 
Gln Lys Asn Asn Arg Leu Leu Glu Ile Thr Arg Glu Phe Ser Val Asn
225                 230                 235                 240 
Ala Gly Val Thr Thr Pro Val Ser Thr Tyr Met Leu Thr Asn Ser Glu
                245                 250                 255     
Leu Leu Ser Leu Ile Asn Asp Met Pro Ile Thr Asn Asp Gln Lys Lys
            260                 265                 270         
Leu Met Ser Asn Asn Val Gln Ile Val Arg Gln Gln Ser Tyr Ser Ile
        275                 280                 285             
Met Ser Ile Ile Lys Lys Glu Val Leu Ala Tyr Val Val Gln Leu Pro
    290                 295                 300                 
Leu Tyr Gly Val Ile Asp Thr Pro Cys Trp Lys Leu His Thr Ser Pro
305                 310                 315                 320 
Leu Cys Thr Thr Asn Thr Lys Glu Gly Ser Asn Ile Cys Leu Thr Arg
                325                 330                 335     
Thr Asp Arg Gly Trp Tyr Cys Asp Asn Ala Gly Ser Val Ser Phe Phe
            340                 345                 350         
Pro Gln Ala Glu Thr Cys Lys Val Gln Ser Asn Arg Val Phe Cys Asp
        355                 360                 365             
Thr Met Asn Ser Leu Thr Leu Pro Ser Glu Val Asn Leu Cys Asn Val
    370                 375                 380                 
Asp Ile Phe Asn Pro Lys Tyr Asp Cys Lys Ile Met Thr Ser Lys Thr
385                 390                 395                 400 
Asp Val Ser Ser Ser Val Ile Thr Ser Leu Gly Ala Ile Val Ser Cys
                405                 410                 415     
Tyr Gly Lys Thr Lys Cys Thr Ala Ser Asn Lys Asn Arg Gly Ile Ile
            420                 425                 430         
Lys Thr Phe Ser Asn Gly Cys Asp Tyr Val Ser Asn Lys Gly Val Asp
        435                 440                 445             
Thr Val Ser Val Gly Asn Thr Leu Tyr Tyr Val Asn Lys Gln Glu Gly
    450                 455                 460                 
Lys Ser Leu Tyr Val Lys Gly Glu Pro Ile Ile Asn Phe Tyr Asp Pro
465                 470                 475                 480 
Leu Val Phe Pro Ser Gly Glu Phe Asp Ala Ser Ile Ser Gln Val Asn
                485                 490                 495     
Glu Lys Ile Asn Gln Ser Leu Ala Phe Ile Arg Lys Ser Asp Glu Leu
            500                 505                 510         
Leu His Asn Val Asn Ala Gly Lys Ser Thr Thr Asn Ile Met Ile Thr
        515                 520                 525             
Ala Ile Ile Ile Val Ile Val Val Ile Leu Leu Ser Leu Ile Ala Val
    530                 535                 540                 
Gly Leu Leu Leu Tyr Cys Lys Ala Arg Ser Thr Pro Val Thr Leu Ser
545                 550                 555                 560 
Lys Asp Gln Leu Ser Gly Ile Asn Asn Ile Ala Phe Ser Asn
                565                 570                 


<210> 94
<211> 6505
<212> DNA
<213> Respiratory syncytial virus, Merck strain p17_pp

<400> 94
atggatccca ttattaatgg aaattctgct aatgtttatc taaccgatag ttatttaaaa 60
ggtgttatct ctttctcaga gtgtaatgct ttaggaagct acatattcaa tggtccttat 120
ctcaaaaatg attataccaa cttaattagt agacaaaatc cattaataga acacatgaat 180
ctaaagaaac taaatataac acagtcctta atatctaagt atcataaagg tgaaataaaa 240
ttagaagaac cgacttattt tcagtcatta cttatgacat acaagagtat gacctcgtca 300
gaacagattg ctaccactaa tttacttaaa aagataataa gaagagctat agaaataagt 360
gatgtcaaag tctatgctat attgaataaa ctagggctta aagaaaagga caagattaaa 420
tccaacaatg gacaagatga agccaattca gttattacga ccataatcaa agatgatata 480
ctttcagctg ttaaagataa tcaatctcat cttaaagcag gcaaaaatca ctctacaaaa 540
caaaaagaca caatcaaaac aacactcctg aagaaattga tgtgttcaat gcaacatcct 600
ccatcatggt taatacattg gtttaactta tacacaaaat taaacaacat attaacacag 660
tatcgatcaa atgaggtaaa aaaccatggg tttacattga tagataatca aactcttagt 720
ggatttcaat ttattttgaa ccaatatggt tgtatagttt ataataagga actcaaaaga 780
attactgtga caacctataa tcaattcttg acatggaaag atattagcct tagtagatta 840
aatgtttgtt taattacatg gattagtaac tgcttgaaca cattaaataa aagcttaggc 900
ttaagatgcg gattcaataa tgttatctta acacaactat tcctttatgg agattgtata 960
ctaaaactat ttcacaatga ggggttctac ataataaaag aggtagaggg atttattatg 1020
tctctaattt taaatataac agaagaagat caattcagaa aacgatttta taatagtatg 1080
ctcaacaaca tcacagatgc tgctaataaa gctcagaaaa atctgctatc aagagtatgt 1140
catacattat tagataagac agtatccgat aatataataa atggcagatg gataattcta 1200
ttaagtaagt tccttaaatt aattaagctt gcgggtgaca ataaccttaa caatctgagt 1260
gaactatatt ttttgttcag aatatttgga cacccaatgg tagatgaaag acaagccatg 1320
gatgctgtta aaattaattg caatgagacc aaattttact tgctaagcag tctaagtatg 1380
ttaagaggtg cctttatata tagaattata aaagggtttg taaataatta caacagatgg 1440
cctactttaa gaaatgctat tgttttaccc ttaagatggt taacttacta taaactaaac 1500
acttatcctt ctttgttgga acttacagaa agagatttga ttgtgttatc aggactacgt 1560
ttctatcgtg agtttcggtt gcctaaaaaa gtggatcttg aaatgattat aaatgataaa 1620
gctatatcac ctcctaaaaa tttgatatgg actagtttcc ctagaaatta catgccatca 1680
cacatacaaa actatataga acatgaaaaa ttaaaatttt ccgagagtga taaatcaaga 1740
agagtattag agtattattt aagagataac aagttcaatg aatgtgattt atacaactgt 1800
gtagttgatc aaagttatct aaacaaccct aatcatgtgg tatcattgac aggcaaagaa 1860
agagaactca gtgtaggtag aatgtttgca atgcaaccgg gaatgttcag acaggttcaa 1920
atattagcag agaaaatgat agctgaaaac attttacaat tctttcctga aagtcttaca 1980
agatatggtg atctagaact acaaaaaata ttagaattga aagcaggaat aagtaacaaa 2040
tcaaatcgct acaatgacaa ttacaacaat tacattagta agtgctctat catcacagat 2100
ctcagcaaat tcaatcaagc atttcgatat gaaacgtcat gtatttgtag tgatgtgctt 2160
gatgaactgc atggtgtaca atctctattt tcctggttac atttaactat tcctcatgtt 2220
acaataatat gtacatatag gcatgcaccc ccctatatag gagatcatat tgtagatctt 2280
aacaatgtag atgaacaaag tggattatat agatatcaca tgggtggcat cgaagggtgg 2340
tgtcaaaaac tatggaccat agaagctata tcactattgg atctaatatc tctcaaaggg 2400
aaattctcaa ttactgcttt aattaatggt gacaatcaat caatagatat aagcaaacca 2460
attagactca tggaaggtca aactcatgct caagcagatt atttgctagc attaaatagc 2520
cttaaattac tgtataaaga gtatgcaggc ataggccaca aattaaaagg aactgagact 2580
tatatatcac gagatatgca atttatgagt aaaacaattc aacataacgg tgtgtattac 2640
ccagctagta taaagaaagt cctaagagtg ggaccgtgga taaacactat acttgatgat 2700
ttcaaagtga gtttagaatc tataggtagt ttgacacaag aattagaata tagaggtgaa 2760
agtctattat gcagtttaat atttagaaat gtatggttat ataatcagat tgctctacaa 2820
ttaaaaaatc atgcattatg taacaataaa ctatatttgg acatattaaa ggttctgaaa 2880
cacttaaaaa ccttttttaa tcttgataat attgatacag cattaacatt gtatatgaat 2940
ttacctatgt tatttggtgg tggtgatccc aacttgttat atcgaagttt ctatagaaga 3000
acccccgact tcctcacaga ggctatagtt cactctgtgt tcatacttag ttattataca 3060
aaccatgact taaaagataa acttcaagat ctgtcagatg atagattgaa taagttctta 3120
acatgcataa tcacgtttga caaaaaccct aacgctgaat tcgtaacatt gatgagagat 3180
cctcaagctt tagggtctga gagacaagct aaaattacta gcgaaatcaa taggctggca 3240
gttacagagg ttttgagtac agctccaaac aaaatattct ccaaaagtgc acaacattat 3300
accactacag agatagatct aaatgatatt atgcaaaata tagaacctac atatcctcat 3360
gggctaagag ttgtttatga aagtttaccc ttttataaag cagagaaaat agtaaatctt 3420
atatcaggta caaaatctat aactaacata ctggaaaaaa cttctgccat agacttaaca 3480
gatattgata gagccactga gatgatgagg aaaaacataa ctttgcttat aaggatactt 3540
ccattggatt gtaacagaga taaaagagag atattgagta tggaaaacct aagtattact 3600
gaattaagca aatatgttag ggaaagatct tggtctttat tcaatatagt tggtgttaca 3660
tcacccagta tcatgtatac aatggacatc aaatatacta caagcactat agctagtggc 3720
ataattatag agaaatataa tgttaacagt ttaacacgtg gtgagagagg acccactaaa 3780
ccatgggttg gttcatctac acaagagaaa aaaacaatgc cagtttataa tagacaagtc 3840
ttaaccaaaa aacagagaga tcaaatagat ctattagcaa aattggattg ggtgtatgca 3900
tctatagata acaaggatga attcatggaa gaactcagca taggaaccct tgggttaaca 3960
tatgaaaaag ccaagaaatt atttccacaa tatttaagtg tcaactattt gcatcgactt 4020
acagtcagta gtagaccatg tgaattccct gcatcaatac cagcttatag aacaacaaat 4080
tatcactttg acactagccc tattaatcgc atattaacag aaaagtatgg tgatgaagat 4140
attgacatag tattccaaaa ctgtataagc tttggcctta gcttaatgtc agtagtagaa 4200
caatttacta atgtatgtcc taacagaatt attctcatac ctaagcttaa tgagatacat 4260
ttgatgaaac ctcccatatt cacaggtgat gttgatattc acaagttaaa acaagtgata 4320
caaaaacagc atatgttttt accagacaaa ataagtttga ctcaatatgt agaattattc 4380
ttaagtaata aaacactcaa atctggatct catgttaatt ctaatttaat attggcacat 4440
aaaatatctg actattttca taatacttac attttaagta ctaatttagc tggacattgg 4500
attctgatta tacaacttat gaaagattct aagggtattt ttgaaaaaga ttggggagag 4560
ggatatataa ctgatcatat gtttattaat ttgaaagttt tcttcaatgc ctataagacc 4620
tatctcttgt gttttcataa aggttatggc aaagcaaagc tggagtgtga tatgaacacc 4680
tcagatctcc tatgtgtatt ggaattaata gacagtagtt attggaaatc tatgtctaag 4740
gtatttttag aacaaaaagt tatcaaatac attcttagcc aagatgcaag tttacataga 4800
gtaaaaggat gtcatagctt caaattatgg tttcttaaac gtcttaatgt agcagaattc 4860
acagtttgcc cttgggttgt taacatagat tatcatccaa cacatatgaa agcaatatta 4920
acttatatag atcttgttag aatgggattg ataaatatag atagaataca cattaaaaat 4980
aaacacaaat tcaatgatga attttatact tctaatctct tctacattaa ttataacttc 5040
tcagataata ctcatctatt aactaaacat ataaggattg ctaattctga attagaaaat 5100
aattacaaca aattatatca tcctacacca gaaaccctag agaatatact agccaatccg 5160
attaaaagta atgacaaaaa gacactgaat gaatattgta taggtaaaaa tgttgactca 5220
ataatgttac cattgttatc taataagaag cttattaaat cgtctgcaat gattagaacc 5280
aattacagca aacaagattt gtataattta ttccctatgg ttgtgattga tagaattata 5340
gatcattcag gcaatacagc caaatccaac caactttaca ctactacttc ccaccaaata 5400
tctttagtgc acaatagcac atcactttac tgcatgcttc cttggcatca tattaataga 5460
ttcaattttg tatttagttc tacaggttgt aaaattagta tagagtatat tttaaaagat 5520
cttaaaatta aagatcccaa ttgtatagca ttcataggtg aaggagcagg gaatttatta 5580
ttgcgtacag tagtggaact tcatcctgac ataagatata tttacagaag tctgaaagat 5640
tgcaatgatc atagtttacc tattgagttt ttaaggctgt acaatggaca tatcaacatt 5700
gattatggtg aaaatttgac cattcctgct acagatgcaa ccaacaacat tcattggtct 5760
tatttacata taaagtttgc tgaacctatc agtctttttg tctgtgatgc tgaattgcct 5820
gtaacagtca attggagtaa aattataata gaatggagca agcatgtaag aaagtgcaag 5880
tactgttcct cagttaataa atgtatgtta atagtaaaat atcatgctca agatgatatt 5940
gatttcaaat tagacaatat aactatatta aaaacttatg tatgcttagg cagtaagtta 6000
aagggatcgg aggtttactt agtcatcaca ataggtcctg caaatatatt cccagcattt 6060
aatgtagtac aaaatgctaa attgatacta tcaagaacca aaaatttcat catgcctaag 6120
aaagctgata aagagtctat tgatgcaaat attaaaagtt ttataccctt tctttgttac 6180
cctataacaa aaaaaggaat taatactgca ttgtcaaaac taaagagtgt tgttagtgga 6240
gatatactat catattctat agctggacgt aatgaagttt tcagcaataa acttataaat 6300
cataaacata tgaacatctt aaaatggttc aatcatgttt taaatttcag atcaacagaa 6360
ttaaactata accatttata tatggtagaa tctacatatc cttacctaag tgaattgtta 6420
aacagcttga caaccaatga acttaaaaaa ctgattaaaa tcacaggtag tctgttatac 6480
aactttcata atgaataatg aataa                                       6505



<210> 95
<211> 2166
<212> PRT
<213> Respiratory syncytial virus, Merck strain p17_pp

<400> 95
Met Asp Pro Ile Ile Asn Gly Asn Ser Ala Asn Val Tyr Leu Thr Asp
 1               5                  10                  15      
Ser Tyr Leu Lys Gly Val Ile Ser Phe Ser Glu Cys Asn Ala Leu Gly
            20                  25                  30          
Ser Tyr Ile Phe Asn Gly Pro Tyr Leu Lys Asn Asp Tyr Thr Asn Leu
        35                  40                  45              
Ile Ser Arg Gln Asn Pro Leu Ile Glu His Met Asn Leu Lys Lys Leu
    50                  55                  60                  
Asn Ile Thr Gln Ser Leu Ile Ser Lys Tyr His Lys Gly Glu Ile Lys
65                  70                  75                  80  
Leu Glu Glu Pro Thr Tyr Phe Gln Ser Leu Leu Met Thr Tyr Lys Ser
                85                  90                  95      
Met Thr Ser Ser Glu Gln Ile Ala Thr Thr Asn Leu Leu Lys Lys Ile
            100                 105                 110         
Ile Arg Arg Ala Ile Glu Ile Ser Asp Val Lys Val Tyr Ala Ile Leu
        115                 120                 125             
Asn Lys Leu Gly Leu Lys Glu Lys Asp Lys Ile Lys Ser Asn Asn Gly
    130                 135                 140                 
Gln Asp Glu Ala Asn Ser Val Ile Thr Thr Ile Ile Lys Asp Asp Ile
145                 150                 155                 160 
Leu Ser Ala Val Lys Asp Asn Gln Ser His Leu Lys Ala Gly Lys Asn
                165                 170                 175     
His Ser Thr Lys Gln Lys Asp Thr Ile Lys Thr Thr Leu Leu Lys Lys
            180                 185                 190         
Leu Met Cys Ser Met Gln His Pro Pro Ser Trp Leu Ile His Trp Phe
        195                 200                 205             
Asn Leu Tyr Thr Lys Leu Asn Asn Ile Leu Thr Gln Tyr Arg Ser Asn
    210                 215                 220                 
Glu Val Lys Asn His Gly Phe Thr Leu Ile Asp Asn Gln Thr Leu Ser
225                 230                 235                 240 
Gly Phe Gln Phe Ile Leu Asn Gln Tyr Gly Cys Ile Val Tyr Asn Lys
                245                 250                 255     
Glu Leu Lys Arg Ile Thr Val Thr Thr Tyr Asn Gln Phe Leu Thr Trp
            260                 265                 270         
Lys Asp Ile Ser Leu Ser Arg Leu Asn Val Cys Leu Ile Thr Trp Ile
        275                 280                 285             
Ser Asn Cys Leu Asn Thr Leu Asn Lys Ser Leu Gly Leu Arg Cys Gly
    290                 295                 300                 
Phe Asn Asn Val Ile Leu Thr Gln Leu Phe Leu Tyr Gly Asp Cys Ile
305                 310                 315                 320 
Leu Lys Leu Phe His Asn Glu Gly Phe Tyr Ile Ile Lys Glu Val Glu
                325                 330                 335     
Gly Phe Ile Met Ser Leu Ile Leu Asn Ile Thr Glu Glu Asp Gln Phe
            340                 345                 350         
Arg Lys Arg Phe Tyr Asn Ser Met Leu Asn Asn Ile Thr Asp Ala Ala
        355                 360                 365             
Asn Lys Ala Gln Lys Asn Leu Leu Ser Arg Val Cys His Thr Leu Leu
    370                 375                 380                 
Asp Lys Thr Val Ser Asp Asn Ile Ile Asn Gly Arg Trp Ile Ile Leu
385                 390                 395                 400 
Leu Ser Lys Phe Leu Lys Leu Ile Lys Leu Ala Gly Asp Asn Asn Leu
                405                 410                 415     
Asn Asn Leu Ser Glu Leu Tyr Phe Leu Phe Arg Ile Phe Gly His Pro
            420                 425                 430         
Met Val Asp Glu Arg Gln Ala Met Asp Ala Val Lys Ile Asn Cys Asn
        435                 440                 445             
Glu Thr Lys Phe Tyr Leu Leu Ser Ser Leu Ser Met Leu Arg Gly Ala
    450                 455                 460                 
Phe Ile Tyr Arg Ile Ile Lys Gly Phe Val Asn Asn Tyr Asn Arg Trp
465                 470                 475                 480 
Pro Thr Leu Arg Asn Ala Ile Val Leu Pro Leu Arg Trp Leu Thr Tyr
                485                 490                 495     
Tyr Lys Leu Asn Thr Tyr Pro Ser Leu Leu Glu Leu Thr Glu Arg Asp
            500                 505                 510         
Leu Ile Val Leu Ser Gly Leu Arg Phe Tyr Arg Glu Phe Arg Leu Pro
        515                 520                 525             
Lys Lys Val Asp Leu Glu Met Ile Ile Asn Asp Lys Ala Ile Ser Pro
    530                 535                 540                 
Pro Lys Asn Leu Ile Trp Thr Ser Phe Pro Arg Asn Tyr Met Pro Ser
545                 550                 555                 560 
His Ile Gln Asn Tyr Ile Glu His Glu Lys Leu Lys Phe Ser Glu Ser
                565                 570                 575     
Asp Lys Ser Arg Arg Val Leu Glu Tyr Tyr Leu Arg Asp Asn Lys Phe
            580                 585                 590         
Asn Glu Cys Asp Leu Tyr Asn Cys Val Val Asp Gln Ser Tyr Leu Asn
        595                 600                 605             
Asn Pro Asn His Val Val Ser Leu Thr Gly Lys Glu Arg Glu Leu Ser
    610                 615                 620                 
Val Gly Arg Met Phe Ala Met Gln Pro Gly Met Phe Arg Gln Val Gln
625                 630                 635                 640 
Ile Leu Ala Glu Lys Met Ile Ala Glu Asn Ile Leu Gln Phe Phe Pro
                645                 650                 655     
Glu Ser Leu Thr Arg Tyr Gly Asp Leu Glu Leu Gln Lys Ile Leu Glu
            660                 665                 670         
Leu Lys Ala Gly Ile Ser Asn Lys Ser Asn Arg Tyr Asn Asp Asn Tyr
        675                 680                 685             
Asn Asn Tyr Ile Ser Lys Cys Ser Ile Ile Thr Asp Leu Ser Lys Phe
    690                 695                 700                 
Asn Gln Ala Phe Arg Tyr Glu Thr Ser Cys Ile Cys Ser Asp Val Leu
705                 710                 715                 720 
Asp Glu Leu His Gly Val Gln Ser Leu Phe Ser Trp Leu His Leu Thr
                725                 730                 735     
Ile Pro His Val Thr Ile Ile Cys Thr Tyr Arg His Ala Pro Pro Tyr
            740                 745                 750         
Ile Gly Asp His Ile Val Asp Leu Asn Asn Val Asp Glu Gln Ser Gly
        755                 760                 765             
Leu Tyr Arg Tyr His Met Gly Gly Ile Glu Gly Trp Cys Gln Lys Leu
    770                 775                 780                 
Trp Thr Ile Glu Ala Ile Ser Leu Leu Asp Leu Ile Ser Leu Lys Gly
785                 790                 795                 800 
Lys Phe Ser Ile Thr Ala Leu Ile Asn Gly Asp Asn Gln Ser Ile Asp
                805                 810                 815     
Ile Ser Lys Pro Ile Arg Leu Met Glu Gly Gln Thr His Ala Gln Ala
            820                 825                 830         
Asp Tyr Leu Leu Ala Leu Asn Ser Leu Lys Leu Leu Tyr Lys Glu Tyr
        835                 840                 845             
Ala Gly Ile Gly His Lys Leu Lys Gly Thr Glu Thr Tyr Ile Ser Arg
    850                 855                 860                 
Asp Met Gln Phe Met Ser Lys Thr Ile Gln His Asn Gly Val Tyr Tyr
865                 870                 875                 880 
Pro Ala Ser Ile Lys Lys Val Leu Arg Val Gly Pro Trp Ile Asn Thr
                885                 890                 895     
Ile Leu Asp Asp Phe Lys Val Ser Leu Glu Ser Ile Gly Ser Leu Thr
            900                 905                 910         
Gln Glu Leu Glu Tyr Arg Gly Glu Ser Leu Leu Cys Ser Leu Ile Phe
        915                 920                 925             
Arg Asn Val Trp Leu Tyr Asn Gln Ile Ala Leu Gln Leu Lys Asn His
    930                 935                 940                 
Ala Leu Cys Asn Asn Lys Leu Tyr Leu Asp Ile Leu Lys Val Leu Lys
945                 950                 955                 960 
His Leu Lys Thr Phe Phe Asn Leu Asp Asn Ile Asp Thr Ala Leu Thr
                965                 970                 975     
Leu Tyr Met Asn Leu Pro Met Leu Phe Gly Gly Gly Asp Pro Asn Leu
            980                 985                 990         
Leu Tyr Arg Ser Phe Tyr Arg Arg Thr Pro Asp Phe Leu Thr Glu Ala
        995                 1000                1005            
Ile Val His Ser Val Phe Ile Leu Ser Tyr Tyr Thr Asn His Asp Leu
    1010                1015                1020                
Lys Asp Lys Leu Gln Asp Leu Ser Asp Asp Arg Leu Asn Lys Phe Leu
1025                1030                1035               1040 
Thr Cys Ile Ile Thr Phe Asp Lys Asn Pro Asn Ala Glu Phe Val Thr
                1045                1050                1055    
Leu Met Arg Asp Pro Gln Ala Leu Gly Ser Glu Arg Gln Ala Lys Ile
            1060                1065                1070        
Thr Ser Glu Ile Asn Arg Leu Ala Val Thr Glu Val Leu Ser Thr Ala
        1075                1080                1085            
Pro Asn Lys Ile Phe Ser Lys Ser Ala Gln His Tyr Thr Thr Thr Glu
    1090                1095                1100                
Ile Asp Leu Asn Asp Ile Met Gln Asn Ile Glu Pro Thr Tyr Pro His
1105                1110                1115               1120 
Gly Leu Arg Val Val Tyr Glu Ser Leu Pro Phe Tyr Lys Ala Glu Lys
                1125                1130                1135    
Ile Val Asn Leu Ile Ser Gly Thr Lys Ser Ile Thr Asn Ile Leu Glu
            1140                1145                1150        
Lys Thr Ser Ala Ile Asp Leu Thr Asp Ile Asp Arg Ala Thr Glu Met
        1155                1160                1165            
Met Arg Lys Asn Ile Thr Leu Leu Ile Arg Ile Leu Pro Leu Asp Cys
    1170                1175                1180                
Asn Arg Asp Lys Arg Glu Ile Leu Ser Met Glu Asn Leu Ser Ile Thr
1185                1190                1195               1200 
Glu Leu Ser Lys Tyr Val Arg Glu Arg Ser Trp Ser Leu Phe Asn Ile
                1205                1210                1215    
Val Gly Val Thr Ser Pro Ser Ile Met Tyr Thr Met Asp Ile Lys Tyr
            1220                1225                1230        
Thr Thr Ser Thr Ile Ala Ser Gly Ile Ile Ile Glu Lys Tyr Asn Val
        1235                1240                1245            
Asn Ser Leu Thr Arg Gly Glu Arg Gly Pro Thr Lys Pro Trp Val Gly
    1250                1255                1260                
Ser Ser Thr Gln Glu Lys Lys Thr Met Pro Val Tyr Asn Arg Gln Val
1265                1270                1275               1280 
Leu Thr Lys Lys Gln Arg Asp Gln Ile Asp Leu Leu Ala Lys Leu Asp
                1285                1290                1295    
Trp Val Tyr Ala Ser Ile Asp Asn Lys Asp Glu Phe Met Glu Glu Leu
            1300                1305                1310        
Ser Ile Gly Thr Leu Gly Leu Thr Tyr Glu Lys Ala Lys Lys Leu Phe
        1315                1320                1325            
Pro Gln Tyr Leu Ser Val Asn Tyr Leu His Arg Leu Thr Val Ser Ser
    1330                1335                1340                
Arg Pro Cys Glu Phe Pro Ala Ser Ile Pro Ala Tyr Arg Thr Thr Asn
1345                1350                1355               1360 
Tyr His Phe Asp Thr Ser Pro Ile Asn Arg Ile Leu Thr Glu Lys Tyr
                1365                1370                1375    
Gly Asp Glu Asp Ile Asp Ile Val Phe Gln Asn Cys Ile Ser Phe Gly
            1380                1385                1390        
Leu Ser Leu Met Ser Val Val Glu Gln Phe Thr Asn Val Cys Pro Asn
        1395                1400                1405            
Arg Ile Ile Leu Ile Pro Lys Leu Asn Glu Ile His Leu Met Lys Pro
    1410                1415                1420                
Pro Ile Phe Thr Gly Asp Val Asp Ile His Lys Leu Lys Gln Val Ile
1425                1430                1435               1440 
Gln Lys Gln His Met Phe Leu Pro Asp Lys Ile Ser Leu Thr Gln Tyr
                1445                1450                1455    
Val Glu Leu Phe Leu Ser Asn Lys Thr Leu Lys Ser Gly Ser His Val
            1460                1465                1470        
Asn Ser Asn Leu Ile Leu Ala His Lys Ile Ser Asp Tyr Phe His Asn
        1475                1480                1485            
Thr Tyr Ile Leu Ser Thr Asn Leu Ala Gly His Trp Ile Leu Ile Ile
    1490                1495                1500                
Gln Leu Met Lys Asp Ser Lys Gly Ile Phe Glu Lys Asp Trp Gly Glu
1505                1510                1515               1520 
Gly Tyr Ile Thr Asp His Met Phe Ile Asn Leu Lys Val Phe Phe Asn
                1525                1530                1535    
Ala Tyr Lys Thr Tyr Leu Leu Cys Phe His Lys Gly Tyr Gly Lys Ala
            1540                1545                1550        
Lys Leu Glu Cys Asp Met Asn Thr Ser Asp Leu Leu Cys Val Leu Glu
        1555                1560                1565            
Leu Ile Asp Ser Ser Tyr Trp Lys Ser Met Ser Lys Val Phe Leu Glu
    1570                1575                1580                
Gln Lys Val Ile Lys Tyr Ile Leu Ser Gln Asp Ala Ser Leu His Arg
1585                1590                1595               1600 
Val Lys Gly Cys His Ser Phe Lys Leu Trp Phe Leu Lys Arg Leu Asn
                1605                1610                1615    
Val Ala Glu Phe Thr Val Cys Pro Trp Val Val Asn Ile Asp Tyr His
            1620                1625                1630        
Pro Thr His Met Lys Ala Ile Leu Thr Tyr Ile Asp Leu Val Arg Met
        1635                1640                1645            
Gly Leu Ile Asn Ile Asp Arg Ile His Ile Lys Asn Lys His Lys Phe
    1650                1655                1660                
Asn Asp Glu Phe Tyr Thr Ser Asn Leu Phe Tyr Ile Asn Tyr Asn Phe
1665                1670                1675               1680 
Ser Asp Asn Thr His Leu Leu Thr Lys His Ile Arg Ile Ala Asn Ser
                1685                1690                1695    
Glu Leu Glu Asn Asn Tyr Asn Lys Leu Tyr His Pro Thr Pro Glu Thr
            1700                1705                1710        
Leu Glu Asn Ile Leu Ala Asn Pro Ile Lys Ser Asn Asp Lys Lys Thr
        1715                1720                1725            
Leu Asn Glu Tyr Cys Ile Gly Lys Asn Val Asp Ser Ile Met Leu Pro
    1730                1735                1740                
Leu Leu Ser Asn Lys Lys Leu Ile Lys Ser Ser Ala Met Ile Arg Thr
1745                1750                1755               1760 
Asn Tyr Ser Lys Gln Asp Leu Tyr Asn Leu Phe Pro Met Val Val Ile
                1765                1770                1775    
Asp Arg Ile Ile Asp His Ser Gly Asn Thr Ala Lys Ser Asn Gln Leu
            1780                1785                1790        
Tyr Thr Thr Thr Ser His Gln Ile Ser Leu Val His Asn Ser Thr Ser
        1795                1800                1805            
Leu Tyr Cys Met Leu Pro Trp His His Ile Asn Arg Phe Asn Phe Val
    1810                1815                1820                
Phe Ser Ser Thr Gly Cys Lys Ile Ser Ile Glu Tyr Ile Leu Lys Asp
1825                1830                1835               1840 
Leu Lys Ile Lys Asp Pro Asn Cys Ile Ala Phe Ile Gly Glu Gly Ala
                1845                1850                1855    
Gly Asn Leu Leu Leu Arg Thr Val Val Glu Leu His Pro Asp Ile Arg
            1860                1865                1870        
Tyr Ile Tyr Arg Ser Leu Lys Asp Cys Asn Asp His Ser Leu Pro Ile
        1875                1880                1885            
Glu Phe Leu Arg Leu Tyr Asn Gly His Ile Asn Ile Asp Tyr Gly Glu
    1890                1895                1900                
Asn Leu Thr Ile Pro Ala Thr Asp Ala Thr Asn Asn Ile His Trp Ser
1905                1910                1915               1920 
Tyr Leu His Ile Lys Phe Ala Glu Pro Ile Ser Leu Phe Val Cys Asp
                1925                1930                1935    
Ala Glu Leu Pro Val Thr Val Asn Trp Ser Lys Ile Ile Ile Glu Trp
            1940                1945                1950        
Ser Lys His Val Arg Lys Cys Lys Tyr Cys Ser Ser Val Asn Lys Cys
        1955                1960                1965            
Met Leu Ile Val Lys Tyr His Ala Gln Asp Asp Ile Asp Phe Lys Leu
    1970                1975                1980                
Asp Asn Ile Thr Ile Leu Lys Thr Tyr Val Cys Leu Gly Ser Lys Leu
1985                1990                1995               2000 
Lys Gly Ser Glu Val Tyr Leu Val Ile Thr Ile Gly Pro Ala Asn Ile
                2005                2010                2015    
Phe Pro Ala Phe Asn Val Val Gln Asn Ala Lys Leu Ile Leu Ser Arg
            2020                2025                2030        
Thr Lys Asn Phe Ile Met Pro Lys Lys Ala Asp Lys Glu Ser Ile Asp
        2035                2040                2045            
Ala Asn Ile Lys Ser Phe Ile Pro Phe Leu Cys Tyr Pro Ile Thr Lys
    2050                2055                2060                
Lys Gly Ile Asn Thr Ala Leu Ser Lys Leu Lys Ser Val Val Ser Gly
2065                2070                2075               2080 
Asp Ile Leu Ser Tyr Ser Ile Ala Gly Arg Asn Glu Val Phe Ser Asn
                2085                2090                2095    
Lys Leu Ile Asn His Lys His Met Asn Ile Leu Lys Trp Phe Asn His
            2100                2105                2110        
Val Leu Asn Phe Arg Ser Thr Glu Leu Asn Tyr Asn His Leu Tyr Met
        2115                2120                2125            
Val Glu Ser Thr Tyr Pro Tyr Leu Ser Glu Leu Leu Asn Ser Leu Thr
    2130                2135                2140                
Thr Asn Glu Leu Lys Lys Leu Ile Lys Ile Thr Gly Ser Leu Leu Tyr
2145                2150                2155               2160 
Asn Phe His Asn Glu Ile
                2165    

