                         SEQUENCE LISTING

<110>  Acrometrix
       Behrens, Sven-Erik
       Schoenbrunner, Ralf
 
<120>  Replication Stable and RNase Resistant Chimeras of Pestivirus 
       with Insertion in 3' Nontranslated Region (3'NTR)

<130>  16029.4008

<140>  to be assigned
<141>  2009-11-24

<150>  US 12/277282
<151>  2008-11-24

<160>  20    

<170>  PatentIn version 3.5

<210>  1
<211>  12267
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7

<400>  1
gtatacgagg ttaggcaagt tctcgtatac atattggaca ctctaaaaat aattaggcct       60

aggggacaaa aatcctcctt agcgaaggcc gaaaagaggc taaccatgcc cttagtagga      120

ctagcaaaat aaggggggta gcaacagtgg cgagttcgtt ggatggctga agccctgagt      180

acagggtagt cgtcagtggt tcgacgcttt ggaggacaag cctcgagatg ccacgtggac      240

gagggcatgc ccacagcaca tcttaacctg gacaggggtc gttcaggtga aaacggttta      300

accaaccgct acgaatacag tctgatagga tgctgcagag gcccactgta ttgctactga      360

aaatctctgc tgtacatggc acatggagtt gatcacaaat gaacttttat acaaaacata      420

caaacaaaaa cccgctggag tggaggaacc agtatacgac caagctggta accctttgtt      480

tggagaaaga ggagtgattc atccgcagtc aacgctaaaa cttccacata aaagagggga      540

gcgtgaagtc cccaccaatc tggcttcttt accaaaaaga ggtgactgca ggtcgggtaa      600

cagcaagggg cctgtgagtg gaatctactt aaaaccaggg ccgttattct accaagatta      660

taaaggacct gtctatcata gagccccatt ggagtttttt gaggaggcgt ctatgtgtga      720

gacaactaaa agaataggga gagtaactgg tagtgacagc agattatacc acatttacgt      780

gtgtattgat gggtgcataa tagtcaagag tgctacaaaa gaccgccaga aagtactcaa      840

gtgggtccac aacaagctaa actgccccct atgggtttca agctgctccg acacaaaaga      900

tgaaggggtg gtgaggaaga agcaacaaaa gccagatagg ttggaaaagg ggagaatgaa      960

gataacacct aaggagtcag agaaagacag taagaccaag ccgccagatg ctacgatagt     1020

ggtagatgga gtcaagtatc aggtaaagaa aaaaggaaaa gtcaagagca agaacaccca     1080

ggacggctta taccacaaca aaaataaacc tcaagagtcg cgcaagaaac tagagaaagc     1140

cctattggcc tgggcaataa tagccctggt tttctttcaa gtcacaatgg gagagaacat     1200

aacgcaatgg aacttacaag ataatggaac ggaaggcata caacgagcca tgtttcaaag     1260

aggagtgaat agaagtttac atgggatctg gccagagaaa atctgtacag gtgttccttc     1320

ccacctggcc actgacacag aattgaaggc aattcatggt atgatggatg caagtgagaa     1380

gacaaattat acgtgctgca gactccaacg ccatgaatgg aacaaacatg gttggtgcaa     1440

ctggtacaac attgaacctt ggatcctcct tatgaataaa actcaggcca accttactga     1500

gggtcagcca ctaagggagt gtgccgtcac atgccggtat gatcgagata gtgacctgaa     1560

tgtagtaaca caagccaggg atagccccac accattaaca ggttgcaaga aaggcaaaaa     1620

cttttccttt gcaggcatat tggtacaagg gccttgcaac tttgaaatag ccgtaagtga     1680

tgtgctgttc aaagagcatg attgcactag tgtgattcaa gacacagctc actacctcgt     1740

agacgggatg accaactccc tagagagtgc caggcaaggg accgcgaaac taacaacttg     1800

gctgggcagg cagcttggga tactaggaaa gaaactggaa aacaagagta agacatggtt     1860

tggggcatat gcagcctctc cctattgtga ggtagaacgg aagcttggtt acatctggta     1920

tacaaagaat tgcactccag cctgtttgcc taggaataca aagatcatcg gccccggtag     1980

gtttgacacc aatgccgagg atggtaaaat actgcatgag atggggggtc acttgtcgga     2040

ggtgctacta ctctcagtgg tagtgctgtc cgatttcgct ccagagacag ccagtgtgat     2100

atacttgatt cttcatttct ccatcccaca aggacacact gatatacaag attgtgacaa     2160

aaaccaacta aacctcaccg tagaactcac aacagcagaa gtaataccag gctcagtttg     2220

gaacttgggt aaatatgttt gtgtaagacc agattggtgg ccttatgaga cagccacagt     2280

cctggtgatt gaagaggtgg gtcaagtaat taaggttgtc ttaagggcgt taaaagatct     2340

gacgcgcatt tggaccgctg ctacaaccac tgcattcttg gtttgtctgg tgaaggtagt     2400

gagaggccaa gtgttacaag gtatactgtg gctgatgctc ataacagggg cgcaagggta     2460

cccagactgc aaacccggct tttcatacgc catagccaaa aatgatgaga ttggcccact     2520

tggagctaca ggcctcacca ctcagtggta cgaatactcg gatgggatgc ggctgcagga     2580

ctcagtagtt gaagtttggt gtaaaaatgg agagatcaaa tatctaatca gatgcgggag     2640

ggaagccagg tatctggctg ttctacacac gagagccttg ccgacatctg tagtatttga     2700

aaaaattttt gatgggaaag aacaagagga catagtagaa atggatgaca actttgaatt     2760

cggtctttgc ccgtgtgatg ctagaccctt gataagggga aaatttaata caacacttct     2820

aaatgggcca gccttccaga tggtttgccc tataggatgg acagggactg taagctgtac     2880

actggccaat aaggatacgt tagccacaat cgttgtgaga acgtataaga gggtcaggcc     2940

ttttccatat aggcaggact gtgtcaccca gaaaaccatc ggggaagacc tctacgactg     3000

tgccttagga gggaattgga cttgtgtgcc gggggatgca ctacgatatg tagctgggcc     3060

cgttgagtct tgtgagtggt gtggttacaa gtttttaaaa agtgagggtc tgccgcattt     3120

cccaatcggc aaatgcaggc tgaagaatga gagtggctat agacaagtgg atgagacttc     3180

ttgcaacaga aacggcgtgg ctatagtgcc atctggcacg gtcaaatgca agatagggga     3240

cacggtggtg caagtcattg caatggatga taaactaggg cctatgcctt gcaaaccaca     3300

tgaaatcata tccagtgagg ggccagtgga aaagacggca tgcaccttca actacacaag     3360

aacattaaaa aacaagtact ttgagcccag ggataactat tttcaacaat acatgttaaa     3420

gggggagtac caatattggt ttgacctaga gatcactgac caccaccgag attacttcgc     3480

tgagtccctg ttggtgatag tagttgcact cctgggtggc aggtacgtgc tttggctgct     3540

ggtcacatac atgatcttat cagaacagat ggcctcgggt gtccagtatg gggcaggtga     3600

aatagtgatg atgggcaact tgttaacaca tgacagtgtt gaagtggtga catatttctt     3660

actactatac ctactactaa gagaggaaaa caccaaaaaa tgggtcatac ttatatacca     3720

catcatagta atgcatcctc taaaatcggt gacggtgata ttgctaatgg ttggggggat     3780

ggcaaaggct gaaccaggtg cccaggggta cctagagcag gtagacctta gttttacgat     3840

gattacgatc atcgtaatag gtctggttat agctaggcgt gatcccactg tggtgccact     3900

agtcactata gtcgcggcac tgaagatcac aggactaggc tttgggcccg gagtggatgc     3960

agctatggca gttctcacct taaccctact gatgactagt tatgtgacag actacttcag     4020

gtataaaagg tggatacaat gtatcctcag cttagtagcc ggggtgttcc ttatccggac     4080

cctcaaacat ctaggtgaac tcaaaacccc tgagctgacc ataccaaatt ggaggccact     4140

aaccttcata ctattatacc tgacttcagc aacagttgtt acaagatgga aaattgatat     4200

agctggcata ttcctgcaag gggcccctat ccttttgatg atcgccaccc tatgggctga     4260

cttcttgact cttgttctga tcctacccac ctacgaatta gccaagctgt actacctaaa     4320

gaacgtcaag actgacgtgg agaagagttg gctggggggg ttagactaca ggacaattga     4380

ctctgtctat gatgtggatg aaagtggaga aggcgtgtac ctcttcccgt ccagacagaa     4440

gaaaaataag aatatcagca tactcttgcc cctcatcaga gctacgctaa taagttgtat     4500

tagcagcaaa tggcagatgg tgtatatggc ttacttaacc ctggacttta tgtactacat     4560

gcacagaaag gttattgaag agatatcagg gagtaccaat gtgatgtcta gagtgatagc     4620

agcacttata gaattaaact ggtccatgga agaagaagag agcaagggct taaagaagtt     4680

ttttatacta tctggaaggt tgaggaacct tataataaag cataaggtta ggaaccagac     4740

tgtggcaagc tggtatgggg aggaagaagt ctacggcatg ccaaaagtcg taaccataat     4800

aagggcctgc acgctaaaca agaacaaaca ttgcataata tgcacagtat gtgaggctag     4860

aaagtggaag ggaggcaact gccctaaatg cggccgccac gggaagccca tcatttgtgg     4920

gatgactcta gcggattttg aagaaaggca ctacaagaga atttttataa gggaaggtaa     4980

ctttgaagga cccttcaggc aggaatacaa tgggtttgta caatacaccg ctagggggca     5040

attgttcctg agaaatttac ccatattggc aaccaaagta aaaatgatca tggtaggcaa     5100

cctaggagag gaaatcggtg atctagaaca cctaggatgg atcctaaggg gacctgccgt     5160

gtgcaagaaa ataactgagc acgaaaaatg ccatgtcaac atactggaca agctgactgc     5220

gttttttgga gttatgccaa gagggactac accaagggct ccggtgagat tcccaacagc     5280

actactaaag gtaaggaggg gattggaaac cggttgggct tacacgcatc aaggtggcat     5340

aagctcagta gaccatgtga ccgctggcaa ggatctattg gtttgtgaca gtatgggtag     5400

aactagagtg gtttgccaaa gcaacaacaa gttaactgat gagacagaat atggtgtcaa     5460

gacggactcc ggatgtccag atggtgccag atgctatgta ttaaacccag aggcagtaaa     5520

tatatcaggg tccaagggag ctgtcgtaca cctccaaaaa acgggtgggg aatttacatg     5580

tgttactgca tcaggtacac cggccttctt cgacctgaaa aatttgaaag gatggtcggg     5640

tctacccata tttgaagcct ccagcggcag agtggttggc agagtcaaag tgggaaagaa     5700

tgaggaatcc aaacccacaa aattaatgag tggtatccaa actgtttcta aaaatacggc     5760

cgatttaaca gaaatggtca agaagataac cagcatgaac aggggggact ttaggcagat     5820

aacccttgca acaggggcag ggaagaccac tgagctccca aaagcagtga tagaggagat     5880

aggacgacac aaacgggtac tagtgctcat accattaaga gcagcagctg agtcagtcta     5940

tcaatacatg agattgaaac acccaagtat ctcctttaac ctgagaatag gggacatgaa     6000

agaaggggat atggcaaccg ggatcaccta cgcctcatat ggatattttt gccaaatgcc     6060

acaaccaaag ctcagagcag caatgataga gtattcatac atatttctgg atgagtatca     6120

ctgcgctact cctgagcagt tggctgttat aggaaaaatt cacagatttt ctgagagcat     6180

aagagtggtt gccatgactg ccaccccagc agggtcagta accacaacag ggcaaaaaca     6240

cccaatagaa gaattcatag cccctgaggt gatgaaaggg gaggaccttg gaagccagtt     6300

ccttgacata gcggggttaa agatccctgt agaggagatg aagggtaaca tgttggtttt     6360

cgtgcccacg aggaacatgg cagttgaagt agccaagaaa ctaaaagcca agggctacaa     6420

ctcagggtat tactacagtg gggaagaccc agctaacttg agagtggtaa catcacagtc     6480

cccatacgtc gtggtagcca ctaatgccat cgagtcaggg gtaacgctgc cagatttaga     6540

tacagttgtt gacacaggtc tgaaatgtga gaagagggtg agggtgtctt ccaaaatacc     6600

ctttatagta acaggcctta agagaatggc tgtcactgtg ggcgaacagg ctcagcggag     6660

aggcagggta ggtagagtga aacccggtag gtattataga agtcaggaaa cagcaaccgg     6720

gtcaaaggac taccactatg acttgttaca ggcacagagg tacgggatcg aagatgggat     6780

caacgtaaca aagtccttta gggagatgaa ttatgactgg agcctgtatg aggaagacag     6840

cttgctgata acccagctgg agatactgaa caatctactc atctctgaag atttaccagc     6900

agctgttaaa aacatcatgg caagaactga tcacccagag cctatccagc ttgcatataa     6960

cagttatgag gtccaagtcc ctgtgctgtt cccaaaaata aggaatgggg aggtcacaga     7020

cacttacgag aactactcat tcctaaatgc aaggaaacta ggggaagacg tgcccgtgta     7080

cgtttatgcc accgaagatg aagatctggc tgtggacctt ctaggcttgg actggccaga     7140

cccagggaat cagcaagtag tggagactgg gaaggcactg aagcaagtgg taggactgtc     7200

ctctgccgaa aatgccttgc tcatagccct atttgggtat gtaggatacc aagccttgtc     7260

aaaaagacac gtcccaatga tcacagacat atacactata gaagatcaaa gactagagga     7320

cacaacccac cttcaatatg cgcccaatgc cataagaact gaggggaagg agactgaact     7380

aaaggaatta gcagtgggtg acttggacaa aatcatgggt tccatctcgg actatgcatc     7440

agagggattg aatttcgtaa ggtcccaagc agaaaagatg agatctgccc ccgctttcaa     7500

agaaaacgtg gaagctgcta aagggtacgt ccaaaagttt attgattctc tcatagaaaa     7560

taaagaaacc ataatcagat atggcctgtg gggaacacac acggcactct acaagagtat     7620

tgccgcgaga ttgggtcatg aaactgcatt cgctacacta gtgataaagt ggctggcctt     7680

cgggggtgag tcggtgtcag accacatgag acaagcagct gtcgacctgg ttgtttatta     7740

tgtgatcaat aagccctcct tcccagggga ttctgaaacc caacaggaag gaaggcgatt     7800

cgtcgccagc ctgttcatct ccgctttggc aacctacaca tacaaaactt ggaattacaa     7860

caacctctcc aaggtagtag aaccagcctt agcatacctc ccctatgcta ccaatgcact     7920

aaaaatgttt accccgacca gactggagag cgtagttata cttagtacca caatatacaa     7980

aacttacctc tcaataagga agggaaagag tgatggactg ttgggtacag ggatcagtgc     8040

agcaatggag attctatcac agaacccagt gtcggtaggt atatctgtca tgctgggggt     8100

gggggcgatt gccgcgcaca atgccattga gtctagtgaa caaaaaagga ccctgttgat     8160

gaaagtgttt gtaaaaaact tcctggacca ggcggcaaca gatgagctgg taaaggaaaa     8220

cccagagaaa ataataatgg ccctatttga agcagtccag acaattggca accccttgag     8280

gctcatatat cacctgtatg gggtttacta caaaggctgg gaagcaaaag aactatcaga     8340

gagaacagca ggcaggaacc tgttcacctt gataatgttc gaagccttcg aactactagg     8400

gatggactct gaagggaaga taaggaacct gtctgggaat tatgtcctgg atttgatcta     8460

cagcctacat aaacagataa atagaggctt gaaaaaaata gtcttggggt gggctcccgc     8520

accatttagt tgcgactgga ctcctagtga tgagagaatt aggttaccca caaacaacta     8580

tctaagagta gaaactaagt gtccatgtgg ctatgagatg aaagcactaa ggaacgttgg     8640

tggcagtctt accaaagtgg aggagaaagg accttttctc tgcaggaaca ggcttggtag     8700

agggccggtc aactatagag tcacaaagta ctatgatgac aacctcaaag agataaaacc     8760

agttgctaaa ctagaaggat ttgtggatca ctattacaaa ggtgttacag caaggataga     8820

ttatggcaga gggaaaatgc tattagctac tgataaatgg gaggtggagc acggtgttgt     8880

cactaggttg gcaaagagat ataccggagt tggattcaag ggagcatacc tgggtgatga     8940

acccaaccac cgcgacctag tagaaagaga ctgtgcaact ataacaaaaa atacagtgca     9000

gtttttaaaa atgaagaaag gctgtgcatt tacctatgac ttaaccctgt ccaatttaac     9060

caggttaatt gaattggtac acaaaaataa cctagaagag aaagacatac cagcagccac     9120

agtaacgaca tggctggctt atacttttgt aaatgaagat attgggacta taaaaccagt     9180

actaggagag agagtggtca ccgacccagt ggtggatgtt aacttacaac cagaagtaca     9240

agtggataca tcagaggttg ggatcacttt agttggtagg gcagccttaa tgacgacagg     9300

tactacaccc gtagtcgaaa aaacagagcc caatgctgat ggtggtccaa gctccataaa     9360

gattgggttg gatgaaggaa gatacccagg acctggactg caagaccgca ccttgaccga     9420

tgaaatacat tctagggatg aaaggccctt tgttctagtc ctgggctcaa aaaattctat     9480

gtcaaataga gctaaaactg ctagaaacat caacttatac aaggggaata accccaggga     9540

gattagagat ctgatggcac aggggcgtat gctagttgtg gccttaaagg attttaaccc     9600

tgagttgtct gaactagttg atttcaaggg gactttctta gacagggaag ccttggaagc     9660

tctcagcctg gggcggccaa agtccaagca ggtgaccaca gccacagtta gggagttatt     9720

agagcaggag gtacaagttg agatccccag ttggtttgga gcaggtgatc cagtcttctt     9780

ggaagtgact ttgaagggtg acagatatca cttagtagga gatgtagata gagtgaaaga     9840

tcaagcgaag gagcttgggg ccacggacca gacaagaata gtgaaggaag tgggtgcaag     9900

aacctatacc atgaagctgt ctagttggtt tcttcaggca acaaataaac agatgagctt     9960

gaccccttta tttgaggagc tattgctacg ttgcccccct aaaataaaga gcaataaagg    10020

gcacatggca tcagcttacc aactagcaca gggaaactgg gagccccttg actgtggagt    10080

tcacctgggc accatacctg ccaggagggt aaaaatccac ccatatgaag cttacctgaa    10140

actgaaggat ttattggaag aagaagaaaa gaaaccaaag tgtagagaca cagtaataag    10200

agaacacaac aagtggatcc tcaaaaaagt gaggcaccag ggtaatctca atacaaagaa    10260

aatcctcaac cctggaaagc tatcagaaca gctagataga gaagggcata aaagaaacat    10320

ttataacaat cagattggca ccataatgac ggaagcagga agtaggttgg aaaaattacc    10380

agtcgtcaga gcccaaactg acactaaaag cttccatgag gcaatcagag ataagataga    10440

caagaatgaa aatcagcaga gcccaggact gcatgataaa ttgttagaga tctttcatac    10500

aatagcccaa cccagcctaa gacacaccta cagtgacgtg acgtgggagc aacttgaggc    10560

aggggttaat agaaaggggg ctgctggctt tctagagaag aagaatgttg gagaagtact    10620

ggactcagag aagcacctgg tggaacaact gatcagagat ttgaaaacag gaaggaagat    10680

aagatattat gagacagcaa taccaaaaaa tgagaagaga gatgtcagtg atgattggca    10740

atcaggggac ttagtagatg agaagaaacc aagggtgatt caataccctg aagctaaaac    10800

aagactagcc atcactaaag taatgtacaa ctgggtgaaa cagcagcccg tcgtgatccc    10860

agggtatgaa gggaagaccc cattatttaa cattttcaac aaggtgagga aggaatggga    10920

tttgttcaat gaaccagtag ctgtgagttt cgacactaag gcttgggaca cccaagtaac    10980

tagtagagat ctacggctta ttggtgaaat tcaaaaatat tactacagga aagagtggca    11040

caaattcatc gataccatta ctgaccatat ggtggaggtg cccgtcataa cggcagatgg    11100

tgaggtatac ataagaaatg gacaaagggg tagtggccag ccagacacaa gtgcaggcaa    11160

tagcatgcta aacgtgttaa caatgatgta tgccttctgt gaaagtacgg gggttccata    11220

caagagtttc aatagggttg caaggatcca tgtctgtggg gatgacggct tcctaataac    11280

agagaagggg ctgggattaa agtttgccaa caatgggatg caaattctgc acgaagcagg    11340

caagcctcaa aagataactg agggggaaag aatgaaagtt gcctataggt tcgaggacat    11400

agaattctgc tctcatacac cagtccccgt taggtggtct gataacacca gcagttacat    11460

ggccggcaga gacactgccg ttatattatc aaagatggca acaagattgg attcaagtgg    11520

agaaaggggt actatagcat atgaaaaagc agtggccttt agttttttgc tgatgtactc    11580

ctggaatcct cttgtgagga ggatctgtct actggtcctt tcacagcagc cagagacaac    11640

tccatcaacc cagaccactt actattataa aggagaccca ataggagcct acaaagatgt    11700

aataggtaag aatttgtgtg aattaaaaag gacgggtttt gaaaaattgg ccaatttaaa    11760

cctaagcctg tccacgttag gaatctggtc caaacataca agtaaaagaa tcatccaaga    11820

ctgtgtaacc atcgggaaag aggaaggcaa ttggctggtc aatgccgaca ggttgatatc    11880

tagcaaaact ggccatttgt acatacctga caaaggttat acattacaag ggaaacatta    11940

tgaacaactt caactgcagg caagaactag cccagtcacg ggagtaggga cggagagata    12000

taaactaggc cctatagtaa acctgctgct gaggaggttg agagttctgc ttatggcagc    12060

tgtcggtgcc agcagttgaa ataatgtatg tatatattgt atataaatct gtatttgtat    12120

atattatgtt taaatttagt tgagattagt agtgatatat agttatctac ctcaagctaa    12180

cactacactc aatgcacaca gcactttagc tgtatgaggg tacacccgac gtccacggtt    12240

ggactaggga aaacccttaa cagcccc                                        12267


<210>  2
<211>  341
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV 5' NTR

<400>  2
gccagccccc gattgggggc gacactccac catagatcac tcccctgtga ggaactactg       60

tcttcacgca gaaagcgtct agccatggcg ttagtatgag tgtcgtgcag cctccaggac      120

cccccctctc gggagagcca tagtggtctg cggaaccggt gagtacaccg gaattgccag      180

gacgaccggg tcctttcttg gatcaacccg ctcaatgcct ggagatttgg gcgtgccccc      240

gcgagactgc tagccgagta gtgttgggtc gcgaaaggcc ttgtggtact gcctgatagg      300

gtgcttgcga gtgcctcggg aggtctcgta gaccgtgcac c                          341


<210>  3
<211>  12625
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV non-CP7-HCV 5'NTR chimera

<400>  3
gtatacgagg ttaggcaagt tctcgtatac atattggaca ctctaaaaat aattaggcct       60

aggggacaaa aatcctcctt agcgaaggcc gaaaagaggc taaccatgcc cttagtagga      120

ctagcaaaat aaggggggta gcaacagtgg cgagttcgtt ggatggctga agccctgagt      180

acagggtagt cgtcagtggt tcgacgcttt ggaggacaag cctcgagatg ccacgtggac      240

gagggcatgc ccacagcaca tcttaacctg gacaggggtc gttcaggtga aaacggttta      300

accaaccgct acgaatacag tctgatagga tgctgcagag gcccactgta ttgctactga      360

aaatctctgc tgtacatggc acatggagtt gatcacaaat gaacttttat acaaaacata      420

caaacaaaaa cccgctggag tggaggaacc agtatacgac caagctggta accctttgtt      480

tggagaaaga ggagtgattc atccgcagtc aacgctaaaa cttccacata aaagagggga      540

gcgtgaagtc cccaccaatc tggcttcttt accaaaaaga ggtgactgca ggtcgggtaa      600

cagcaagggg cctgtgagtg gaatctactt aaaaccaggg ccgttattct accaagatta      660

taaaggacct gtctatcata gagccccatt ggagtttttt gaggaggcgt ctatgtgtga      720

gacaactaaa agaataggga gagtaactgg tagtgacagc agattatacc acatttacgt      780

gtgtattgat gggtgcataa tagtcaagag tgctacaaaa gaccgccaga aagtactcaa      840

gtgggtccac aacaagctaa actgccccct atgggtttca agctgctccg acacaaaaga      900

tgaaggggtg gtgaggaaga agcaacaaaa gccagatagg ttggaaaagg ggagaatgaa      960

gataacacct aaggagtcag agaaagacag taagaccaag ccgccagatg ctacgatagt     1020

ggtagatgga gtcaagtatc aggtaaagaa aaaaggaaaa gtcaagagca agaacaccca     1080

ggacggctta taccacaaca aaaataaacc tcaagagtcg cgcaagaaac tagagaaagc     1140

cctattggcc tgggcaataa tagccctggt tttctttcaa gtcacaatgg gagagaacat     1200

aacgcaatgg aacttacaag ataatggaac ggaaggcata caacgagcca tgtttcaaag     1260

aggagtgaat agaagtttac atgggatctg gccagagaaa atctgtacag gtgttccttc     1320

ccacctggcc actgacacag aattgaaggc aattcatggt atgatggatg caagtgagaa     1380

gacaaattat acgtgctgca gactccaacg ccatgaatgg aacaaacatg gttggtgcaa     1440

ctggtacaac attgaacctt ggatcctcct tatgaataaa actcaggcca accttactga     1500

gggtcagcca ctaagggagt gtgccgtcac atgccggtat gatcgagata gtgacctgaa     1560

tgtagtaaca caagccaggg atagccccac accattaaca ggttgcaaga aaggcaaaaa     1620

cttttccttt gcaggcatat tggtacaagg gccttgcaac tttgaaatag ccgtaagtga     1680

tgtgctgttc aaagagcatg attgcactag tgtgattcaa gacacagctc actacctcgt     1740

agacgggatg accaactccc tagagagtgc caggcaaggg accgcgaaac taacaacttg     1800

gctgggcagg cagcttggga tactaggaaa gaaactggaa aacaagagta agacatggtt     1860

tggggcatat gcagcctctc cctattgtga ggtagaacgg aagcttggtt acatctggta     1920

tacaaagaat tgcactccag cctgtttgcc taggaataca aagatcatcg gccccggtag     1980

gtttgacacc aatgccgagg atggtaaaat actgcatgag atggggggtc acttgtcgga     2040

ggtgctacta ctctcagtgg tagtgctgtc cgatttcgct ccagagacag ccagtgtgat     2100

atacttgatt cttcatttct ccatcccaca aggacacact gatatacaag attgtgacaa     2160

aaaccaacta aacctcaccg tagaactcac aacagcagaa gtaataccag gctcagtttg     2220

gaacttgggt aaatatgttt gtgtaagacc agattggtgg ccttatgaga cagccacagt     2280

cctggtgatt gaagaggtgg gtcaagtaat taaggttgtc ttaagggcgt taaaagatct     2340

gacgcgcatt tggaccgctg ctacaaccac tgcattcttg gtttgtctgg tgaaggtagt     2400

gagaggccaa gtgttacaag gtatactgtg gctgatgctc ataacagggg cgcaagggta     2460

cccagactgc aaacccggct tttcatacgc catagccaaa aatgatgaga ttggcccact     2520

tggagctaca ggcctcacca ctcagtggta cgaatactcg gatgggatgc ggctgcagga     2580

ctcagtagtt gaagtttggt gtaaaaatgg agagatcaaa tatctaatca gatgcgggag     2640

ggaagccagg tatctggctg ttctacacac gagagccttg ccgacatctg tagtatttga     2700

aaaaattttt gatgggaaag aacaagagga catagtagaa atggatgaca actttgaatt     2760

cggtctttgc ccgtgtgatg ctagaccctt gataagggga aaatttaata caacacttct     2820

aaatgggcca gccttccaga tggtttgccc tataggatgg acagggactg taagctgtac     2880

actggccaat aaggatacgt tagccacaat cgttgtgaga acgtataaga gggtcaggcc     2940

ttttccatat aggcaggact gtgtcaccca gaaaaccatc ggggaagacc tctacgactg     3000

tgccttagga gggaattgga cttgtgtgcc gggggatgca ctacgatatg tagctgggcc     3060

cgttgagtct tgtgagtggt gtggttacaa gtttttaaaa agtgagggtc tgccgcattt     3120

cccaatcggc aaatgcaggc tgaagaatga gagtggctat agacaagtgg atgagacttc     3180

ttgcaacaga aacggcgtgg ctatagtgcc atctggcacg gtcaaatgca agatagggga     3240

cacggtggtg caagtcattg caatggatga taaactaggg cctatgcctt gcaaaccaca     3300

tgaaatcata tccagtgagg ggccagtgga aaagacggca tgcaccttca actacacaag     3360

aacattaaaa aacaagtact ttgagcccag ggataactat tttcaacaat acatgttaaa     3420

gggggagtac caatattggt ttgacctaga gatcactgac caccaccgag attacttcgc     3480

tgagtccctg ttggtgatag tagttgcact cctgggtggc aggtacgtgc tttggctgct     3540

ggtcacatac atgatcttat cagaacagat ggcctcgggt gtccagtatg gggcaggtga     3600

aatagtgatg atgggcaact tgttaacaca tgacagtgtt gaagtggtga catatttctt     3660

actactatac ctactactaa gagaggaaaa caccaaaaaa tgggtcatac ttatatacca     3720

catcatagta atgcatcctc taaaatcggt gacggtgata ttgctaatgg ttggggggat     3780

ggcaaaggct gaaccaggtg cccaggggta cctagagcag gtagacctta gttttacgat     3840

gattacgatc atcgtaatag gtctggttat agctaggcgt gatcccactg tggtgccact     3900

agtcactata gtcgcggcac tgaagatcac aggactaggc tttgggcccg gagtggatgc     3960

agctatggca gttctcacct taaccctact gatgactagt tatgtgacag actacttcag     4020

gtataaaagg tggatacaat gtatcctcag cttagtagcc ggggtgttcc ttatccggac     4080

cctcaaacat ctaggtgaac tcaaaacccc tgagctgacc ataccaaatt ggaggccact     4140

aaccttcata ctattatacc tgacttcagc aacagttgtt acaagatgga aaattgatat     4200

agctggcata ttcctgcaag gggcccctat ccttttgatg atcgccaccc tatgggctga     4260

cttcttgact cttgttctga tcctacccac ctacgaatta gccaagctgt actacctaaa     4320

gaacgtcaag actgacgtgg agaagagttg gctggggggg ttagactaca ggacaattga     4380

ctctgtctat gatgtggatg aaagtggaga aggcgtgtac ctcttcccgt ccagacagaa     4440

gaaaaataag aatatcagca tactcttgcc cctcatcaga gctacgctaa taagttgtat     4500

tagcagcaaa tggcagatgg tgtatatggc ttacttaacc ctggacttta tgtactacat     4560

gcacagaaag gttattgaag agatatcagg gagtaccaat gtgatgtcta gagtgatagc     4620

agcacttata gaattaaact ggtccatgga agaagaagag agcaagggct taaagaagtt     4680

ttttatacta tctggaaggt tgaggaacct tataataaag cataaggtta ggaaccagac     4740

tgtggcaagc tggtatgggg aggaagaagt ctacggcatg ccaaaagtcg taaccataat     4800

aagggcctgc acgctaaaca agaacaaaca ttgcataata tgcacagtat gtgaggctag     4860

aaagtggaag ggaggcaact gccctaaatg cggccgccac gggaagccca tcatttgtgg     4920

gatgactcta gcggattttg aagaaaggca ctacaagaga atttttataa gggaaggtaa     4980

ctttgaagga cccttcaggc aggaatacaa tgggtttgta caatacaccg ctagggggca     5040

attgttcctg agaaatttac ccatattggc aaccaaagta aaaatgatca tggtaggcaa     5100

cctaggagag gaaatcggtg atctagaaca cctaggatgg atcctaaggg gacctgccgt     5160

gtgcaagaaa ataactgagc acgaaaaatg ccatgtcaac atactggaca agctgactgc     5220

gttttttgga gttatgccaa gagggactac accaagggct ccggtgagat tcccaacagc     5280

actactaaag gtaaggaggg gattggaaac cggttgggct tacacgcatc aaggtggcat     5340

aagctcagta gaccatgtga ccgctggcaa ggatctattg gtttgtgaca gtatgggtag     5400

aactagagtg gtttgccaaa gcaacaacaa gttaactgat gagacagaat atggtgtcaa     5460

gacggactcc ggatgtccag atggtgccag atgctatgta ttaaacccag aggcagtaaa     5520

tatatcaggg tccaagggag ctgtcgtaca cctccaaaaa acgggtgggg aatttacatg     5580

tgttactgca tcaggtacac cggccttctt cgacctgaaa aatttgaaag gatggtcggg     5640

tctacccata tttgaagcct ccagcggcag agtggttggc agagtcaaag tgggaaagaa     5700

tgaggaatcc aaacccacaa aattaatgag tggtatccaa actgtttcta aaaatacggc     5760

cgatttaaca gaaatggtca agaagataac cagcatgaac aggggggact ttaggcagat     5820

aacccttgca acaggggcag ggaagaccac tgagctccca aaagcagtga tagaggagat     5880

aggacgacac aaacgggtac tagtgctcat accattaaga gcagcagctg agtcagtcta     5940

tcaatacatg agattgaaac acccaagtat ctcctttaac ctgagaatag gggacatgaa     6000

agaaggggat atggcaaccg ggatcaccta cgcctcatat ggatattttt gccaaatgcc     6060

acaaccaaag ctcagagcag caatgataga gtattcatac atatttctgg atgagtatca     6120

ctgcgctact cctgagcagt tggctgttat aggaaaaatt cacagatttt ctgagagcat     6180

aagagtggtt gccatgactg ccaccccagc agggtcagta accacaacag ggcaaaaaca     6240

cccaatagaa gaattcatag cccctgaggt gatgaaaggg gaggaccttg gaagccagtt     6300

ccttgacata gcggggttaa agatccctgt agaggagatg aagggtaaca tgttggtttt     6360

cgtgcccacg aggaacatgg cagttgaagt agccaagaaa ctaaaagcca agggctacaa     6420

ctcagggtat tactacagtg gggaagaccc agctaacttg agagtggtaa catcacagtc     6480

cccatacgtc gtggtagcca ctaatgccat cgagtcaggg gtaacgctgc cagatttaga     6540

tacagttgtt gacacaggtc tgaaatgtga gaagagggtg agggtgtctt ccaaaatacc     6600

ctttatagta acaggcctta agagaatggc tgtcactgtg ggcgaacagg ctcagcggag     6660

aggcagggta ggtagagtga aacccggtag gtattataga agtcaggaaa cagcaaccgg     6720

gtcaaaggac taccactatg acttgttaca ggcacagagg tacgggatcg aagatgggat     6780

caacgtaaca aagtccttta gggagatgaa ttatgactgg agcctgtatg aggaagacag     6840

cttgctgata acccagctgg agatactgaa caatctactc atctctgaag atttaccagc     6900

agctgttaaa aacatcatgg caagaactga tcacccagag cctatccagc ttgcatataa     6960

cagttatgag gtccaagtcc ctgtgctgtt cccaaaaata aggaatgggg aggtcacaga     7020

cacttacgag aactactcat tcctaaatgc aaggaaacta ggggaagacg tgcccgtgta     7080

cgtttatgcc accgaagatg aagatctggc tgtggacctt ctaggcttgg actggccaga     7140

cccagggaat cagcaagtag tggagactgg gaaggcactg aagcaagtgg taggactgtc     7200

ctctgccgaa aatgccttgc tcatagccct atttgggtat gtaggatacc aagccttgtc     7260

aaaaagacac gtcccaatga tcacagacat atacactata gaagatcaaa gactagagga     7320

cacaacccac cttcaatatg cgcccaatgc cataagaact gaggggaagg agactgaact     7380

aaaggaatta gcagtgggtg acttggacaa aatcatgggt tccatctcgg actatgcatc     7440

agagggattg aatttcgtaa ggtcccaagc agaaaagatg agatctgccc ccgctttcaa     7500

agaaaacgtg gaagctgcta aagggtacgt ccaaaagttt attgattctc tcatagaaaa     7560

taaagaaacc ataatcagat atggcctgtg gggaacacac acggcactct acaagagtat     7620

tgccgcgaga ttgggtcatg aaactgcatt cgctacacta gtgataaagt ggctggcctt     7680

cgggggtgag tcggtgtcag accacatgag acaagcagct gtcgacctgg ttgtttatta     7740

tgtgatcaat aagccctcct tcccagggga ttctgaaacc caacaggaag gaaggcgatt     7800

cgtcgccagc ctgttcatct ccgctttggc aacctacaca tacaaaactt ggaattacaa     7860

caacctctcc aaggtagtag aaccagcctt agcatacctc ccctatgcta ccaatgcact     7920

aaaaatgttt accccgacca gactggagag cgtagttata cttagtacca caatatacaa     7980

aacttacctc tcaataagga agggaaagag tgatggactg ttgggtacag ggatcagtgc     8040

agcaatggag attctatcac agaacccagt gtcggtaggt atatctgtca tgctgggggt     8100

gggggcgatt gccgcgcaca atgccattga gtctagtgaa caaaaaagga ccctgttgat     8160

gaaagtgttt gtaaaaaact tcctggacca ggcggcaaca gatgagctgg taaaggaaaa     8220

cccagagaaa ataataatgg ccctatttga agcagtccag acaattggca accccttgag     8280

gctcatatat cacctgtatg gggtttacta caaaggctgg gaagcaaaag aactatcaga     8340

gagaacagca ggcaggaacc tgttcacctt gataatgttc gaagccttcg aactactagg     8400

gatggactct gaagggaaga taaggaacct gtctgggaat tatgtcctgg atttgatcta     8460

cagcctacat aaacagataa atagaggctt gaaaaaaata gtcttggggt gggctcccgc     8520

accatttagt tgcgactgga ctcctagtga tgagagaatt aggttaccca caaacaacta     8580

tctaagagta gaaactaagt gtccatgtgg ctatgagatg aaagcactaa ggaacgttgg     8640

tggcagtctt accaaagtgg aggagaaagg accttttctc tgcaggaaca ggcttggtag     8700

agggccggtc aactatagag tcacaaagta ctatgatgac aacctcaaag agataaaacc     8760

agttgctaaa ctagaaggat ttgtggatca ctattacaaa ggtgttacag caaggataga     8820

ttatggcaga gggaaaatgc tattagctac tgataaatgg gaggtggagc acggtgttgt     8880

cactaggttg gcaaagagat ataccggagt tggattcaag ggagcatacc tgggtgatga     8940

acccaaccac cgcgacctag tagaaagaga ctgtgcaact ataacaaaaa atacagtgca     9000

gtttttaaaa atgaagaaag gctgtgcatt tacctatgac ttaaccctgt ccaatttaac     9060

caggttaatt gaattggtac acaaaaataa cctagaagag aaagacatac cagcagccac     9120

agtaacgaca tggctggctt atacttttgt aaatgaagat attgggacta taaaaccagt     9180

actaggagag agagtggtca ccgacccagt ggtggatgtt aacttacaac cagaagtaca     9240

agtggataca tcagaggttg ggatcacttt agttggtagg gcagccttaa tgacgacagg     9300

tactacaccc gtagtcgaaa aaacagagcc caatgctgat ggtggtccaa gctccataaa     9360

gattgggttg gatgaaggaa gatacccagg acctggactg caagaccgca ccttgaccga     9420

tgaaatacat tctagggatg aaaggccctt tgttctagtc ctgggctcaa aaaattctat     9480

gtcaaataga gctaaaactg ctagaaacat caacttatac aaggggaata accccaggga     9540

gattagagat ctgatggcac aggggcgtat gctagttgtg gccttaaagg attttaaccc     9600

tgagttgtct gaactagttg atttcaaggg gactttctta gacagggaag ccttggaagc     9660

tctcagcctg gggcggccaa agtccaagca ggtgaccaca gccacagtta gggagttatt     9720

agagcaggag gtacaagttg agatccccag ttggtttgga gcaggtgatc cagtcttctt     9780

ggaagtgact ttgaagggtg acagatatca cttagtagga gatgtagata gagtgaaaga     9840

tcaagcgaag gagcttgggg ccacggacca gacaagaata gtgaaggaag tgggtgcaag     9900

aacctatacc atgaagctgt ctagttggtt tcttcaggca acaaataaac agatgagctt     9960

gaccccttta tttgaggagc tattgctacg ttgcccccct aaaataaaga gcaataaagg    10020

gcacatggca tcagcttacc aactagcaca gggaaactgg gagccccttg actgtggagt    10080

tcacctgggc accatacctg ccaggagggt aaaaatccac ccatatgaag cttacctgaa    10140

actgaaggat ttattggaag aagaagaaaa gaaaccaaag tgtagagaca cagtaataag    10200

agaacacaac aagtggatcc tcaaaaaagt gaggcaccag ggtaatctca atacaaagaa    10260

aatcctcaac cctggaaagc tatcagaaca gctagataga gaagggcata aaagaaacat    10320

ttataacaat cagattggca ccataatgac ggaagcagga agtaggttgg aaaaattacc    10380

agtcgtcaga gcccaaactg acactaaaag cttccatgag gcaatcagag ataagataga    10440

caagaatgaa aatcagcaga gcccaggact gcatgataaa ttgttagaga tctttcatac    10500

aatagcccaa cccagcctaa gacacaccta cagtgacgtg acgtgggagc aacttgaggc    10560

aggggttaat agaaaggggg ctgctggctt tctagagaag aagaatgttg gagaagtact    10620

ggactcagag aagcacctgg tggaacaact gatcagagat ttgaaaacag gaaggaagat    10680

aagatattat gagacagcaa taccaaaaaa tgagaagaga gatgtcagtg atgattggca    10740

atcaggggac ttagtagatg agaagaaacc aagggtgatt caataccctg aagctaaaac    10800

aagactagcc atcactaaag taatgtacaa ctgggtgaaa cagcagcccg tcgtgatccc    10860

agggtatgaa gggaagaccc cattatttaa cattttcaac aaggtgagga aggaatggga    10920

tttgttcaat gaaccagtag ctgtgagttt cgacactaag gcttgggaca cccaagtaac    10980

tagtagagat ctacggctta ttggtgaaat tcaaaaatat tactacagga aagagtggca    11040

caaattcatc gataccatta ctgaccatat ggtggaggtg cccgtcataa cggcagatgg    11100

tgaggtatac ataagaaatg gacaaagggg tagtggccag ccagacacaa gtgcaggcaa    11160

tagcatgcta aacgtgttaa caatgatgta tgccttctgt gaaagtacgg gggttccata    11220

caagagtttc aatagggttg caaggatcca tgtctgtggg gatgacggct tcctaataac    11280

agagaagggg ctgggattaa agtttgccaa caatgggatg caaattctgc acgaagcagg    11340

caagcctcaa aagataactg agggggaaag aatgaaagtt gcctataggt tcgaggacat    11400

agaattctgc tctcatacac cagtccccgt taggtggtct gataacacca gcagttacat    11460

ggccggcaga gacactgccg ttatattatc aaagatggca acaagattgg attcaagtgg    11520

agaaaggggt actatagcat atgaaaaagc agtggccttt agttttttgc tgatgtactc    11580

ctggaatcct cttgtgagga ggatctgtct actggtcctt tcacagcagc cagagacaac    11640

tccatcaacc cagaccactt actattataa aggagaccca ataggagcct acaaagatgt    11700

aataggtaag aatttgtgtg aattaaaaag gacgggtttt gaaaaattgg ccaatttaaa    11760

cctaagcctg tccacgttag gaatctggtc caaacataca agtaaaagaa tcatccaaga    11820

ctgtgtaacc atcgggaaag aggaaggcaa ttggctggtc aatgccgaca ggttgatatc    11880

tagcaaaact ggccatttgt acatacctga caaaggttat acattacaag ggaaacatta    11940

tgaacaactt caactgcagg caagaactag cccagtcacg ggagtaggga cggagagata    12000

taaactaggc cctatagtaa acctgctgct gaggaggttg agagttctgc ttatggcagc    12060

tgtcggtgcc agcagttgaa ataatgtatg tatatattgt atataaatct gtatttgtat    12120

atattatgtt taaatacgta gccagccccc gattgggggc gacactccac catagatcac    12180

tcccctgtga ggaactactg tcttcacgca gaaagcgtct agccatggcg ttagtatgag    12240

tgtcgtgcag cctccaggac cccccctctc gggagagcca tagtggtctg cggaaccggt    12300

gagtacaccg gaattgccag gacgaccggg tcctttcttg gatcaacccg ctcaatgcct    12360

ggagatttgg gcgtgccccc gcgagactgc tagccgagta gtgttgggtc gcgaaaggcc    12420

ttgtggtact gcctgatagg gtgcttgcga gtgcctcggg aggtctcgta gaccgtgcac    12480

cttaattaat aatttagttg agattagtag tgatatatag ttatctacct caagctaaca    12540

ctacactcaa tgcacacagc actttagctg tatgagggta cacccgacgt ccacggttgg    12600

actagggaaa acccttaaca gcccc                                          12625


<210>  4
<211>  12281
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7 + cloning site; BVDV-non-CP7 with SnaBI, PacI 
       restriction endonuclease insert

<400>  4
gtatacgagg ttaggcaagt tctcgtatac atattggaca ctctaaaaat aattaggcct       60

aggggacaaa aatcctcctt agcgaaggcc gaaaagaggc taaccatgcc cttagtagga      120

ctagcaaaat aaggggggta gcaacagtgg cgagttcgtt ggatggctga agccctgagt      180

acagggtagt cgtcagtggt tcgacgcttt ggaggacaag cctcgagatg ccacgtggac      240

gagggcatgc ccacagcaca tcttaacctg gacaggggtc gttcaggtga aaacggttta      300

accaaccgct acgaatacag tctgatagga tgctgcagag gcccactgta ttgctactga      360

aaatctctgc tgtacatggc acatggagtt gatcacaaat gaacttttat acaaaacata      420

caaacaaaaa cccgctggag tggaggaacc agtatacgac caagctggta accctttgtt      480

tggagaaaga ggagtgattc atccgcagtc aacgctaaaa cttccacata aaagagggga      540

gcgtgaagtc cccaccaatc tggcttcttt accaaaaaga ggtgactgca ggtcgggtaa      600

cagcaagggg cctgtgagtg gaatctactt aaaaccaggg ccgttattct accaagatta      660

taaaggacct gtctatcata gagccccatt ggagtttttt gaggaggcgt ctatgtgtga      720

gacaactaaa agaataggga gagtaactgg tagtgacagc agattatacc acatttacgt      780

gtgtattgat gggtgcataa tagtcaagag tgctacaaaa gaccgccaga aagtactcaa      840

gtgggtccac aacaagctaa actgccccct atgggtttca agctgctccg acacaaaaga      900

tgaaggggtg gtgaggaaga agcaacaaaa gccagatagg ttggaaaagg ggagaatgaa      960

gataacacct aaggagtcag agaaagacag taagaccaag ccgccagatg ctacgatagt     1020

ggtagatgga gtcaagtatc aggtaaagaa aaaaggaaaa gtcaagagca agaacaccca     1080

ggacggctta taccacaaca aaaataaacc tcaagagtcg cgcaagaaac tagagaaagc     1140

cctattggcc tgggcaataa tagccctggt tttctttcaa gtcacaatgg gagagaacat     1200

aacgcaatgg aacttacaag ataatggaac ggaaggcata caacgagcca tgtttcaaag     1260

aggagtgaat agaagtttac atgggatctg gccagagaaa atctgtacag gtgttccttc     1320

ccacctggcc actgacacag aattgaaggc aattcatggt atgatggatg caagtgagaa     1380

gacaaattat acgtgctgca gactccaacg ccatgaatgg aacaaacatg gttggtgcaa     1440

ctggtacaac attgaacctt ggatcctcct tatgaataaa actcaggcca accttactga     1500

gggtcagcca ctaagggagt gtgccgtcac atgccggtat gatcgagata gtgacctgaa     1560

tgtagtaaca caagccaggg atagccccac accattaaca ggttgcaaga aaggcaaaaa     1620

cttttccttt gcaggcatat tggtacaagg gccttgcaac tttgaaatag ccgtaagtga     1680

tgtgctgttc aaagagcatg attgcactag tgtgattcaa gacacagctc actacctcgt     1740

agacgggatg accaactccc tagagagtgc caggcaaggg accgcgaaac taacaacttg     1800

gctgggcagg cagcttggga tactaggaaa gaaactggaa aacaagagta agacatggtt     1860

tggggcatat gcagcctctc cctattgtga ggtagaacgg aagcttggtt acatctggta     1920

tacaaagaat tgcactccag cctgtttgcc taggaataca aagatcatcg gccccggtag     1980

gtttgacacc aatgccgagg atggtaaaat actgcatgag atggggggtc acttgtcgga     2040

ggtgctacta ctctcagtgg tagtgctgtc cgatttcgct ccagagacag ccagtgtgat     2100

atacttgatt cttcatttct ccatcccaca aggacacact gatatacaag attgtgacaa     2160

aaaccaacta aacctcaccg tagaactcac aacagcagaa gtaataccag gctcagtttg     2220

gaacttgggt aaatatgttt gtgtaagacc agattggtgg ccttatgaga cagccacagt     2280

cctggtgatt gaagaggtgg gtcaagtaat taaggttgtc ttaagggcgt taaaagatct     2340

gacgcgcatt tggaccgctg ctacaaccac tgcattcttg gtttgtctgg tgaaggtagt     2400

gagaggccaa gtgttacaag gtatactgtg gctgatgctc ataacagggg cgcaagggta     2460

cccagactgc aaacccggct tttcatacgc catagccaaa aatgatgaga ttggcccact     2520

tggagctaca ggcctcacca ctcagtggta cgaatactcg gatgggatgc ggctgcagga     2580

ctcagtagtt gaagtttggt gtaaaaatgg agagatcaaa tatctaatca gatgcgggag     2640

ggaagccagg tatctggctg ttctacacac gagagccttg ccgacatctg tagtatttga     2700

aaaaattttt gatgggaaag aacaagagga catagtagaa atggatgaca actttgaatt     2760

cggtctttgc ccgtgtgatg ctagaccctt gataagggga aaatttaata caacacttct     2820

aaatgggcca gccttccaga tggtttgccc tataggatgg acagggactg taagctgtac     2880

actggccaat aaggatacgt tagccacaat cgttgtgaga acgtataaga gggtcaggcc     2940

ttttccatat aggcaggact gtgtcaccca gaaaaccatc ggggaagacc tctacgactg     3000

tgccttagga gggaattgga cttgtgtgcc gggggatgca ctacgatatg tagctgggcc     3060

cgttgagtct tgtgagtggt gtggttacaa gtttttaaaa agtgagggtc tgccgcattt     3120

cccaatcggc aaatgcaggc tgaagaatga gagtggctat agacaagtgg atgagacttc     3180

ttgcaacaga aacggcgtgg ctatagtgcc atctggcacg gtcaaatgca agatagggga     3240

cacggtggtg caagtcattg caatggatga taaactaggg cctatgcctt gcaaaccaca     3300

tgaaatcata tccagtgagg ggccagtgga aaagacggca tgcaccttca actacacaag     3360

aacattaaaa aacaagtact ttgagcccag ggataactat tttcaacaat acatgttaaa     3420

gggggagtac caatattggt ttgacctaga gatcactgac caccaccgag attacttcgc     3480

tgagtccctg ttggtgatag tagttgcact cctgggtggc aggtacgtgc tttggctgct     3540

ggtcacatac atgatcttat cagaacagat ggcctcgggt gtccagtatg gggcaggtga     3600

aatagtgatg atgggcaact tgttaacaca tgacagtgtt gaagtggtga catatttctt     3660

actactatac ctactactaa gagaggaaaa caccaaaaaa tgggtcatac ttatatacca     3720

catcatagta atgcatcctc taaaatcggt gacggtgata ttgctaatgg ttggggggat     3780

ggcaaaggct gaaccaggtg cccaggggta cctagagcag gtagacctta gttttacgat     3840

gattacgatc atcgtaatag gtctggttat agctaggcgt gatcccactg tggtgccact     3900

agtcactata gtcgcggcac tgaagatcac aggactaggc tttgggcccg gagtggatgc     3960

agctatggca gttctcacct taaccctact gatgactagt tatgtgacag actacttcag     4020

gtataaaagg tggatacaat gtatcctcag cttagtagcc ggggtgttcc ttatccggac     4080

cctcaaacat ctaggtgaac tcaaaacccc tgagctgacc ataccaaatt ggaggccact     4140

aaccttcata ctattatacc tgacttcagc aacagttgtt acaagatgga aaattgatat     4200

agctggcata ttcctgcaag gggcccctat ccttttgatg atcgccaccc tatgggctga     4260

cttcttgact cttgttctga tcctacccac ctacgaatta gccaagctgt actacctaaa     4320

gaacgtcaag actgacgtgg agaagagttg gctggggggg ttagactaca ggacaattga     4380

ctctgtctat gatgtggatg aaagtggaga aggcgtgtac ctcttcccgt ccagacagaa     4440

gaaaaataag aatatcagca tactcttgcc cctcatcaga gctacgctaa taagttgtat     4500

tagcagcaaa tggcagatgg tgtatatggc ttacttaacc ctggacttta tgtactacat     4560

gcacagaaag gttattgaag agatatcagg gagtaccaat gtgatgtcta gagtgatagc     4620

agcacttata gaattaaact ggtccatgga agaagaagag agcaagggct taaagaagtt     4680

ttttatacta tctggaaggt tgaggaacct tataataaag cataaggtta ggaaccagac     4740

tgtggcaagc tggtatgggg aggaagaagt ctacggcatg ccaaaagtcg taaccataat     4800

aagggcctgc acgctaaaca agaacaaaca ttgcataata tgcacagtat gtgaggctag     4860

aaagtggaag ggaggcaact gccctaaatg cggccgccac gggaagccca tcatttgtgg     4920

gatgactcta gcggattttg aagaaaggca ctacaagaga atttttataa gggaaggtaa     4980

ctttgaagga cccttcaggc aggaatacaa tgggtttgta caatacaccg ctagggggca     5040

attgttcctg agaaatttac ccatattggc aaccaaagta aaaatgatca tggtaggcaa     5100

cctaggagag gaaatcggtg atctagaaca cctaggatgg atcctaaggg gacctgccgt     5160

gtgcaagaaa ataactgagc acgaaaaatg ccatgtcaac atactggaca agctgactgc     5220

gttttttgga gttatgccaa gagggactac accaagggct ccggtgagat tcccaacagc     5280

actactaaag gtaaggaggg gattggaaac cggttgggct tacacgcatc aaggtggcat     5340

aagctcagta gaccatgtga ccgctggcaa ggatctattg gtttgtgaca gtatgggtag     5400

aactagagtg gtttgccaaa gcaacaacaa gttaactgat gagacagaat atggtgtcaa     5460

gacggactcc ggatgtccag atggtgccag atgctatgta ttaaacccag aggcagtaaa     5520

tatatcaggg tccaagggag ctgtcgtaca cctccaaaaa acgggtgggg aatttacatg     5580

tgttactgca tcaggtacac cggccttctt cgacctgaaa aatttgaaag gatggtcggg     5640

tctacccata tttgaagcct ccagcggcag agtggttggc agagtcaaag tgggaaagaa     5700

tgaggaatcc aaacccacaa aattaatgag tggtatccaa actgtttcta aaaatacggc     5760

cgatttaaca gaaatggtca agaagataac cagcatgaac aggggggact ttaggcagat     5820

aacccttgca acaggggcag ggaagaccac tgagctccca aaagcagtga tagaggagat     5880

aggacgacac aaacgggtac tagtgctcat accattaaga gcagcagctg agtcagtcta     5940

tcaatacatg agattgaaac acccaagtat ctcctttaac ctgagaatag gggacatgaa     6000

agaaggggat atggcaaccg ggatcaccta cgcctcatat ggatattttt gccaaatgcc     6060

acaaccaaag ctcagagcag caatgataga gtattcatac atatttctgg atgagtatca     6120

ctgcgctact cctgagcagt tggctgttat aggaaaaatt cacagatttt ctgagagcat     6180

aagagtggtt gccatgactg ccaccccagc agggtcagta accacaacag ggcaaaaaca     6240

cccaatagaa gaattcatag cccctgaggt gatgaaaggg gaggaccttg gaagccagtt     6300

ccttgacata gcggggttaa agatccctgt agaggagatg aagggtaaca tgttggtttt     6360

cgtgcccacg aggaacatgg cagttgaagt agccaagaaa ctaaaagcca agggctacaa     6420

ctcagggtat tactacagtg gggaagaccc agctaacttg agagtggtaa catcacagtc     6480

cccatacgtc gtggtagcca ctaatgccat cgagtcaggg gtaacgctgc cagatttaga     6540

tacagttgtt gacacaggtc tgaaatgtga gaagagggtg agggtgtctt ccaaaatacc     6600

ctttatagta acaggcctta agagaatggc tgtcactgtg ggcgaacagg ctcagcggag     6660

aggcagggta ggtagagtga aacccggtag gtattataga agtcaggaaa cagcaaccgg     6720

gtcaaaggac taccactatg acttgttaca ggcacagagg tacgggatcg aagatgggat     6780

caacgtaaca aagtccttta gggagatgaa ttatgactgg agcctgtatg aggaagacag     6840

cttgctgata acccagctgg agatactgaa caatctactc atctctgaag atttaccagc     6900

agctgttaaa aacatcatgg caagaactga tcacccagag cctatccagc ttgcatataa     6960

cagttatgag gtccaagtcc ctgtgctgtt cccaaaaata aggaatgggg aggtcacaga     7020

cacttacgag aactactcat tcctaaatgc aaggaaacta ggggaagacg tgcccgtgta     7080

cgtttatgcc accgaagatg aagatctggc tgtggacctt ctaggcttgg actggccaga     7140

cccagggaat cagcaagtag tggagactgg gaaggcactg aagcaagtgg taggactgtc     7200

ctctgccgaa aatgccttgc tcatagccct atttgggtat gtaggatacc aagccttgtc     7260

aaaaagacac gtcccaatga tcacagacat atacactata gaagatcaaa gactagagga     7320

cacaacccac cttcaatatg cgcccaatgc cataagaact gaggggaagg agactgaact     7380

aaaggaatta gcagtgggtg acttggacaa aatcatgggt tccatctcgg actatgcatc     7440

agagggattg aatttcgtaa ggtcccaagc agaaaagatg agatctgccc ccgctttcaa     7500

agaaaacgtg gaagctgcta aagggtacgt ccaaaagttt attgattctc tcatagaaaa     7560

taaagaaacc ataatcagat atggcctgtg gggaacacac acggcactct acaagagtat     7620

tgccgcgaga ttgggtcatg aaactgcatt cgctacacta gtgataaagt ggctggcctt     7680

cgggggtgag tcggtgtcag accacatgag acaagcagct gtcgacctgg ttgtttatta     7740

tgtgatcaat aagccctcct tcccagggga ttctgaaacc caacaggaag gaaggcgatt     7800

cgtcgccagc ctgttcatct ccgctttggc aacctacaca tacaaaactt ggaattacaa     7860

caacctctcc aaggtagtag aaccagcctt agcatacctc ccctatgcta ccaatgcact     7920

aaaaatgttt accccgacca gactggagag cgtagttata cttagtacca caatatacaa     7980

aacttacctc tcaataagga agggaaagag tgatggactg ttgggtacag ggatcagtgc     8040

agcaatggag attctatcac agaacccagt gtcggtaggt atatctgtca tgctgggggt     8100

gggggcgatt gccgcgcaca atgccattga gtctagtgaa caaaaaagga ccctgttgat     8160

gaaagtgttt gtaaaaaact tcctggacca ggcggcaaca gatgagctgg taaaggaaaa     8220

cccagagaaa ataataatgg ccctatttga agcagtccag acaattggca accccttgag     8280

gctcatatat cacctgtatg gggtttacta caaaggctgg gaagcaaaag aactatcaga     8340

gagaacagca ggcaggaacc tgttcacctt gataatgttc gaagccttcg aactactagg     8400

gatggactct gaagggaaga taaggaacct gtctgggaat tatgtcctgg atttgatcta     8460

cagcctacat aaacagataa atagaggctt gaaaaaaata gtcttggggt gggctcccgc     8520

accatttagt tgcgactgga ctcctagtga tgagagaatt aggttaccca caaacaacta     8580

tctaagagta gaaactaagt gtccatgtgg ctatgagatg aaagcactaa ggaacgttgg     8640

tggcagtctt accaaagtgg aggagaaagg accttttctc tgcaggaaca ggcttggtag     8700

agggccggtc aactatagag tcacaaagta ctatgatgac aacctcaaag agataaaacc     8760

agttgctaaa ctagaaggat ttgtggatca ctattacaaa ggtgttacag caaggataga     8820

ttatggcaga gggaaaatgc tattagctac tgataaatgg gaggtggagc acggtgttgt     8880

cactaggttg gcaaagagat ataccggagt tggattcaag ggagcatacc tgggtgatga     8940

acccaaccac cgcgacctag tagaaagaga ctgtgcaact ataacaaaaa atacagtgca     9000

gtttttaaaa atgaagaaag gctgtgcatt tacctatgac ttaaccctgt ccaatttaac     9060

caggttaatt gaattggtac acaaaaataa cctagaagag aaagacatac cagcagccac     9120

agtaacgaca tggctggctt atacttttgt aaatgaagat attgggacta taaaaccagt     9180

actaggagag agagtggtca ccgacccagt ggtggatgtt aacttacaac cagaagtaca     9240

agtggataca tcagaggttg ggatcacttt agttggtagg gcagccttaa tgacgacagg     9300

tactacaccc gtagtcgaaa aaacagagcc caatgctgat ggtggtccaa gctccataaa     9360

gattgggttg gatgaaggaa gatacccagg acctggactg caagaccgca ccttgaccga     9420

tgaaatacat tctagggatg aaaggccctt tgttctagtc ctgggctcaa aaaattctat     9480

gtcaaataga gctaaaactg ctagaaacat caacttatac aaggggaata accccaggga     9540

gattagagat ctgatggcac aggggcgtat gctagttgtg gccttaaagg attttaaccc     9600

tgagttgtct gaactagttg atttcaaggg gactttctta gacagggaag ccttggaagc     9660

tctcagcctg gggcggccaa agtccaagca ggtgaccaca gccacagtta gggagttatt     9720

agagcaggag gtacaagttg agatccccag ttggtttgga gcaggtgatc cagtcttctt     9780

ggaagtgact ttgaagggtg acagatatca cttagtagga gatgtagata gagtgaaaga     9840

tcaagcgaag gagcttgggg ccacggacca gacaagaata gtgaaggaag tgggtgcaag     9900

aacctatacc atgaagctgt ctagttggtt tcttcaggca acaaataaac agatgagctt     9960

gaccccttta tttgaggagc tattgctacg ttgcccccct aaaataaaga gcaataaagg    10020

gcacatggca tcagcttacc aactagcaca gggaaactgg gagccccttg actgtggagt    10080

tcacctgggc accatacctg ccaggagggt aaaaatccac ccatatgaag cttacctgaa    10140

actgaaggat ttattggaag aagaagaaaa gaaaccaaag tgtagagaca cagtaataag    10200

agaacacaac aagtggatcc tcaaaaaagt gaggcaccag ggtaatctca atacaaagaa    10260

aatcctcaac cctggaaagc tatcagaaca gctagataga gaagggcata aaagaaacat    10320

ttataacaat cagattggca ccataatgac ggaagcagga agtaggttgg aaaaattacc    10380

agtcgtcaga gcccaaactg acactaaaag cttccatgag gcaatcagag ataagataga    10440

caagaatgaa aatcagcaga gcccaggact gcatgataaa ttgttagaga tctttcatac    10500

aatagcccaa cccagcctaa gacacaccta cagtgacgtg acgtgggagc aacttgaggc    10560

aggggttaat agaaaggggg ctgctggctt tctagagaag aagaatgttg gagaagtact    10620

ggactcagag aagcacctgg tggaacaact gatcagagat ttgaaaacag gaaggaagat    10680

aagatattat gagacagcaa taccaaaaaa tgagaagaga gatgtcagtg atgattggca    10740

atcaggggac ttagtagatg agaagaaacc aagggtgatt caataccctg aagctaaaac    10800

aagactagcc atcactaaag taatgtacaa ctgggtgaaa cagcagcccg tcgtgatccc    10860

agggtatgaa gggaagaccc cattatttaa cattttcaac aaggtgagga aggaatggga    10920

tttgttcaat gaaccagtag ctgtgagttt cgacactaag gcttgggaca cccaagtaac    10980

tagtagagat ctacggctta ttggtgaaat tcaaaaatat tactacagga aagagtggca    11040

caaattcatc gataccatta ctgaccatat ggtggaggtg cccgtcataa cggcagatgg    11100

tgaggtatac ataagaaatg gacaaagggg tagtggccag ccagacacaa gtgcaggcaa    11160

tagcatgcta aacgtgttaa caatgatgta tgccttctgt gaaagtacgg gggttccata    11220

caagagtttc aatagggttg caaggatcca tgtctgtggg gatgacggct tcctaataac    11280

agagaagggg ctgggattaa agtttgccaa caatgggatg caaattctgc acgaagcagg    11340

caagcctcaa aagataactg agggggaaag aatgaaagtt gcctataggt tcgaggacat    11400

agaattctgc tctcatacac cagtccccgt taggtggtct gataacacca gcagttacat    11460

ggccggcaga gacactgccg ttatattatc aaagatggca acaagattgg attcaagtgg    11520

agaaaggggt actatagcat atgaaaaagc agtggccttt agttttttgc tgatgtactc    11580

ctggaatcct cttgtgagga ggatctgtct actggtcctt tcacagcagc cagagacaac    11640

tccatcaacc cagaccactt actattataa aggagaccca ataggagcct acaaagatgt    11700

aataggtaag aatttgtgtg aattaaaaag gacgggtttt gaaaaattgg ccaatttaaa    11760

cctaagcctg tccacgttag gaatctggtc caaacataca agtaaaagaa tcatccaaga    11820

ctgtgtaacc atcgggaaag aggaaggcaa ttggctggtc aatgccgaca ggttgatatc    11880

tagcaaaact ggccatttgt acatacctga caaaggttat acattacaag ggaaacatta    11940

tgaacaactt caactgcagg caagaactag cccagtcacg ggagtaggga cggagagata    12000

taaactaggc cctatagtaa acctgctgct gaggaggttg agagttctgc ttatggcagc    12060

tgtcggtgcc agcagttgaa ataatgtatg tatatattgt atataaatct gtatttgtat    12120

atattatgtt taaatacgta ttaattaatt tagttgagat tagtagtgat atatagttat    12180

ctacctcaag ctaacactac actcaatgca cacagcactt tagctgtatg agggtacacc    12240

cgacgtccac ggttggacta gggaaaaccc ttaacagccc c                        12281


<210>  5
<211>  355
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7 3' NTR

<400>  5
tacgtagcca gcccccgatt gggggcgaca ctccaccata gatcactccc ctgtgaggaa       60

ctactgtctt cacgcagaaa gcgtctagcc atggcgttag tatgagtgtc gtgcagcctc      120

caggaccccc cctctcggga gagccatagt ggtctgcgga accggtgagt acaccggaat      180

tgccaggacg accgggtcct ttcttggatc aacccgctca atgcctggag atttgggcgt      240

gcccccgcga gactgctagc cgagtagtgt tgggtcgcga aaggccttgt ggtactgcct      300

gatagggtgc ttgcgagtgc ctcgggaggt ctcgtagacc gtgcacctta attaa           355


<210>  6
<211>  205
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7 + cloning site chimera, 3'NTR, SnaBI and PacI 
       restriction endonuclease insert

<400>  6
tgaaataatg tatgtatata ttgtatataa atctgtattt gtatatatta tgtttaaata       60

cgtattaatt aatttagttg agattagtag tgatatatag ttatctacct caagctaaca      120

ctacactcaa tgcacacagc actttagctg tatgagggta cacccgacgt ccacggttgg      180

actagggaaa acccttaaca gcccc                                            205


<210>  7
<211>  549
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7- HCV 5' NTR chimera, 3'NTR

<400>  7
tgaaataatg tatgtatata ttgtatataa atctgtattt gtatatatta tgtttaaata       60

cgtagccagc ccccgattgg gggcgacact ccaccataga tcactcccct gtgaggaact      120

actgtcttca cgcagaaagc gtctagccat ggcgttagta tgagtgtcgt gcagcctcca      180

ggaccccccc tctcgggaga gccatagtgg tctgcggaac cggtgagtac accggaattg      240

ccaggacgac cgggtccttt cttggatcaa cccgctcaat gcctggagat ttgggcgtgc      300

ccccgcgaga ctgctagccg agtagtgttg ggtcgcgaaa ggccttgtgg tactgcctga      360

tagggtgctt gcgagtgcct cgggaggtct cgtagaccgt gcaccttaat taataattta      420

gttgagatta gtagtgatat atagttatct acctcaagct aacactacac tcaatgcaca      480

cagcacttta gctgtatgag ggtacacccg acgtccacgg ttggactagg gaaaaccctt      540

aacagcccc                                                              549


<210>  8
<211>  524
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7 - HCV 5' NTR chimera, BamHI / XbaI cloned PCR 
       fragment, clone 1

<400>  8
ggatccgctg tcggtgccag cagttgaaat aatgtatgta tatattgtat ataaatctgt       60

atttgtatat attatgttta aatacgtagc cagcccccta ttgggggcga cactccacca      120

tagatcactc ccctgtgagg aactactgtc ttcacgcaga aagcgtctag ccatggcgtt      180

agtatgagtg tcgtgcagcc tccaggaccc cccctctcgg gagagccata gtggtctgcg      240

gaaccggtga gtacaccgga attgccagga cgaccgggtc ctttcttgga tcaacccgct      300

caatgcctgg agatttgggc gtgcccccgc gagactgcta gccgagtagt gttgggtcgc      360

gaaaggcctt gtggtactgc ctgatagggt gcttgcgagt gcctcgggag gtctcgtaga      420

ccgtgcacct taattaataa tttagttgag attagtagtg atatatagtt atctacctca      480

agctaacact acactcaatg cacacagcac tttagctgtc taga                       524


<210>  9
<211>  524
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV non-CP7 - HCV 5'NTR chimera, BamHI / XbaI cloned PCR 
       fragment, clone 2

<400>  9
ggatccgctg tcggtgccag cagttgaaat aatgtatgta tatattgtat ataaatctgt       60

atttgtatat attatgttta aatacgtagc cagcccccga ttgggggcga cactccacca      120

tagatcactc ccctgtgagg aactactgtc ttcacgcaga aagcgtctag ccatggcgtt      180

agtatgagtg tcgtgcagcc tccaggaccc cccctctcgg gagagccata gtggtctgcg      240

gaaccggtga gtacaccgga attgccagga cgaccgggtc ctttcttgga tcaacccgct      300

caatgcctgg agatttgggc gtgcccccgc gagactgcta gccgagtagt gttgggtcgc      360

gaaaggcctt gtggtactgt ctgatagggt gcttgcgagt gcctcgggag gtctcgtaga      420

ccgtgcacct taattaataa tttagttgag attagtagtg atatatagtt atctacctca      480

agctaacact acactcaatg cacacagcac tttagctgtc taga                       524


<210>  10
<211>  524
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7- HCV 5' NTR chimera, BamHI / Xba I cloned PCR 
       fragment, clone 3

<400>  10
ggatccgctg tcggtgccag cagttgaaat aatgtatgta tatattgtat ataaatctgt       60

atttgtatat attatgttta aatacgtagc cagcccccga ttgggggcga cactccacca      120

tagatcactc ccctgtgagg aactactgtc ttcacgcaga aagcgtctag ccatggcgtt      180

agtatgagtg tcgtgcagcc tccaggaccc cccctctcgg gagagccata gtggtctgcg      240

gaaccggtga gtacaccgga attgccagga cgaccgggtc ctttcttgga tcaacccgct      300

caatgcctgg agatttgggc gtgcccccgc gagactgcta gccgagtagt gttgggtcgc      360

gaaaggcctt gtggtactgc ctgatagggt gcttgcgagt gcctcgggag gtctcgtaga      420

ccgtgcacct taattaataa tttagttgag attagtagtg atatatagtt atctacctca      480

agccaacact acactcaatg cacacagcac tttagctgtc taga                       524


<210>  11
<211>  524
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7 - HCV 5'NTR chimera, BamHI / XbaI cloned PCR 
       fragment, clone 4

<400>  11
ggatccgctg tcggtgccag cagttgaaat aatgtatgta tatattgtat ataaatctgt       60

atttgtatat attatgttta aatacgtagc cagcccccga ttgggggcga cactccacca      120

tagatcactc ccctgtgagg aactactgtc ttcacgcaga aagcgtctag ccatggcgtt      180

agtatgagtg tcgtgcagcc tccaggaccc cccctctcgg gagagccata gtggtctgcg      240

gaaccggtga gtacaccgga attgccagga cgaccgggtc ctttcttgga tcaacccgct      300

caatgcctgg agatttgggc gtgcccccgc gagactgcta gccgagtagt gttgggtcgc      360

gaaaggcctt gtggtactgc ctgatagggt gcttgcgagt gcctcgggag gtctcgtaga      420

ccgtgcacct taattaataa tttagttgag attagtagtg atatatagtt atctacctca      480

agctaacact acactcaatg cacacagcac tttagctgtc taga                       524


<210>  12
<211>  523
<212>  DNA
<213>  pestivirus type 1


<220>
<221>  misc_feature
<223>  BVDV-non-CP7 - HCV 5'NTR chimera, BamHI / XbaI cloned PCR 
       fragment, clone 5

<400>  12
ggatccgctg tcgtgccagc agttgaaata atgtatgtat atattgtata taaatctgta       60

tttgtatata ttatgtttaa atacgtagcc agcccccgat tgggggcgac actccaccat      120

agatcactcc cctgtgagga actactgtct tcacgcagaa agcgtctagc catggcgtta      180

gtatgagtgt cgtgcagcct ccaggacccc ccctctcggg agagccatag tggtctgcgg      240

aaccggtgag tacaccggaa ttgccaggac gaccgggtcc tttcttggat caacccgctc      300

aatgcctgga gatttgggcg tgcccccgcg agactgctag ccgagtagtg ttgggtcgcg      360

aaaggccttg tggtactgcc tgatagggtg cttgcgagtg cctcgggagg tctcgtagac      420

cgtgcacctt aattaataat ttagttgaga ttagtagtga tatatagtta tctacctcaa      480

gctaacacta cactcaatgc acacagcact ttagctgtct aga                        523


<210>  13
<211>  351
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV subtype 1a, 5'NTR

<400>  13
gctaataata acagccccct gatgggggcg acactccacc atgaatcact cccctgtgag       60

gaactactgt cttcacgcag aaagcgtcta gccatggcgt tagtatgagt gtcgtacagc      120

ctccaggacc ccccctctcg ggagagccat agtggtctgc ggaaccggtg agtacaccgg      180

aattgccagg acgaccgggt cctttcttgg ataaaacccg ctcaatgcct ggagatttgg      240

gcgtgccccc gcaagactgc tggccgagta gtgttgggtc gcgaaaggcc ttgtggtact      300

gcctgatagg gtgcttgcga gtgcctcggg aggtctcgta gaccgtgcac c               351


<210>  14
<211>  349
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV subtype 2a, 5'NTR

<400>  14
actaataata accgccccta ataggggcga cactccgcca tgaatcactc ccctgtgagg       60

aactactgtc ttcacgcaga aagcgtctag ccatggcgtt agtatgagtg tcgtacagcc      120

tccaggcccc cccctctcgg gagagccata gtggtctgcg gaaccggtga gtacaccgga      180

attgccggga agaccgggtc ctttcttgga taaacccgct ctatgcccgg ccatttgggc      240

gtgcccccgc aagactgcta gccgagtagc gttgggttgc gaaaggcctt gtggtactgc      300

ctgatagggt gcttgcgagt gcctcgggag gtctcgtaga ccgtgcacc                  349


<210>  15
<211>  348
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV subtype 3a, 5'NTR

<400>  15
actaataata actgcctctt acgaggcgac actccaccat ggatcactcc cctgtgagga       60

acttctgtct tcacgcggaa agcgcctagc catggcgtta gtacgagtgt cgtgcagcct      120

ccaggccccc ccctctcggg agagccatag tggtctgcgg aaccggtgag tacaccggaa      180

tcgctggggt gaccgggtcc tttcttggaa caacccgctc aatacccaga aatttgggcg      240

tgcccccgcg agatcactag ccgagtagtg ttgggtcgcg aaaggccttg tggtactgcc      300

tgatagggtg cttgcgagtg cctcgggagg tctcgtagac cgtgcaac                   348


<210>  16
<211>  342
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV subtype 4a, 5'NTR

<400>  16
tttaataata agggggcgac actccaccat agatcactcc cctgtgaggt actactgtct       60

tcacgcagaa agcgtctagc catggcagtt agtatagagt gtcgtacagc ctccaggacc      120

ccccctctcg ggagagccat agtggtctgc ggaaccggtg agtacaccgg aatcgccagg      180

acgaccgggt cctttcttgg ataaacccgc tccatgcctg gaaatttggg cgtgcccccg      240

caagactgct aagcgagtag tgttgggtcg cgaaaggcct tgtggtactg cctgataagg      300

tgcttgcgag tcgccgggga ggtactcgta gacctgtgca cc                         342


<210>  17
<211>  318
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV subtype 5a, 5'NTR

<400>  17
attaataata agatcactcc cctgtgagga actactgtct tcacgcagaa agcgtctagc       60

catggcgtta gtatgagtgt cgaacagcct ccaggacccc ccctctcggg agagccatag      120

tggtctgcgg aaccggtgag tacaccggaa ttgccgggat gaccgggtcc tttcttggat      180

aaacccgctc aatgcccgga gatttgggcg tgcccccgcg agactgctag ccgagtagtg      240

ttgggtcgcg aaaggccttg tggtactgcc tgatagggtg cttgcgagtg cctcgggagg      300

tctcgtagac cgtgcacc                                                    318


<210>  18
<211>  348
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV subtype 6p, 5'NTR

<400>  18
gctaataata acagccccta atggggcgac actccaccat gatcactccc ctgtgaggaa       60

ctactgtctt cacgcagaaa gcgtctagcc atggcgttag tatgagtgtc gtgcagcctc      120

caggatcccc cctctcggga gagccatagt ggtctgcgga accggtgagt tcaccggaat      180

tgccaggacg accgggtcct ttcttggatc aaacccgctc aatgcctgga gatttgggcg      240

tgcccccgcg agactgctag ccgagtagtg ttgggtcgcg aaaggccttg tggtactgcc      300

tgatagggtg cttgcgagtg cctcgggagg tctcgtagac cgtgcatc                   348


<210>  19
<211>  317
<212>  DNA
<213>  Hepatitis C virus


<220>
<221>  misc_feature
<223>  HCV subtype 7a, 5'NTR

<400>  19
gataataata aatcactccc ctgcgaggaa ccactgtcct cacgcagaaa gcgtctagcc       60

atgacgttag tatgagtgtc gtacagcctc caggaccccc cctctcggga gagccatagt      120

ggtctgcgga accggtgagt acaccggaat tgccgggaag actgggtcct ttcttggatc      180

aacccactct atgcccggag atttgggcgt gcccccgcga gactgctagc cgagtagtgt      240

tgggtcgcga aaggccttgt ggtactgcct gatagggtgc ttgcgagtgc ctcgggaggt      300

ctcgtagacc gtgcacc                                                     317


<210>  20
<211>  1325
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IRES-EGFP:  Encephalomyocarditis virus IRES and ORF for GFP

<400>  20
ccgcgggctc gggatccgcc cctctccctc ccccccccct aacgttactg gccgaagccg       60

cttggaataa ggccggtgtg cgtttgtcta tatgttattt tccaccatat tgccgtcttt      120

tggcaatgtg agggcccgga aacctggccc tgtcttcttg acgagcattc ctaggggtct      180

ttcccctctc gccaaaggaa tgcaaggtct gttgaatgtc gtgaaggaag cagttcctct      240

ggaagcttct tgaagacaaa caacgtctgt agcgaccctt tgcaggcagc ggaacccccc      300

acctggcgac aggtgcctct gcggccaaaa gccacgtgta taagatacac ctgcaaaggc      360

ggcacaaccc cagtgccacg ttgtgagttg gatagttgtg gaaagagtca aatggctctc      420

ctcaagcgta ttcaacaagg ggctgaagga tgcccagaag gtaccccatt gtatgggatc      480

tgatctgggg cctcggtgca catgctttac atgtgtttag tcgaggttaa aaaaacgtct      540

aggccccccg aaccacgggg acgtggtttt cctttgaaaa acacgatgat aatatggcca      600

caaccatggt gagcaagggc gaggagctgt tcaccggggt ggtgcccatc ctggtcgagc      660

tggacggcga cgtaaacggc cacaagttca gcgtgtccgg cgagggcgag ggcgatgcca      720

cctacggcaa gctgaccctg aagttcatct gcaccaccgg caagctgccc gtgccctggc      780

ccaccctcgt gaccaccctg acctacggcg tgcagtgctt cagccgctac cccgaccaca      840

tgaagcagca cgacttcttc aagtccgcca tgcccgaagg ctacgtccag gagcgcacca      900

tcttcttcaa ggacgacggc aactacaaga cccgcgccga ggtgaagttc gagggcgaca      960

ccctggtgaa ccgcatcgag ctgaagggca tcgacttcaa ggaggacggc aacatcctgg     1020

ggcacaagct ggagtacaac tacaacagcc acaacgtcta tatcatggcc gacaagcaga     1080

agaacggcat caaggtgaac ttcaagatcc gccacaacat cgaggacggc agcgtgcagc     1140

tcgccgacca ctaccagcag aacaccccca tcggcgacgg ccccgtgctg ctgcccgaca     1200

accactacct gagcacccag tccgccctga gcaaagaccc caacgagaag cgcgatcaca     1260

tggtcctgct ggagttcgtg accgccgccg ggatcactct cggcatggac gagctgtaca     1320

agtaa                                                                 1325


