                         SEQUENCE LISTING

<110>  PamGene B.V.
       Oslo University Hospital
 
<120>  METHOD FOR PREDICTING THE RESPONSE OF LOCALLY ADVANCED RECTAL 
       CANCER TO CHEMORADIOTHERAPY

<130>  PAM-057-PCT

<150>  EP 09157818.7
<151>  2009-04-10

<150>  PCT/EP2009/054359
<151>  2009-04-10

<160>  86    

<170>  PatentIn version 3.3

<210>  1
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  1

Val Ser Ser Asp Gly His Glu Tyr Ile Tyr Val Asp Pro 
1               5                   10              


<210>  2
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  2

Ile Ser Leu Asp Asn Pro Asp Tyr Gln Gln Asp Phe Phe 
1               5                   10              


<210>  3
<211>  15
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  3

Pro Asn Glu Gly Asp Asn Asp Tyr Ile Ile Pro Leu Pro Asp Pro 
1               5                   10                  15  


<210>  4
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  4

Ala Glu His Gln Tyr Phe Met Thr Glu Tyr Val Ala Thr 
1               5                   10              


<210>  5
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  5

Glu Glu Gly Ala Pro Asp Tyr Glu Asn Leu Gln Glu Leu 
1               5                   10              


<210>  6
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  6

Ile Val Ala Glu Asn Pro Glu Tyr Leu Ser Glu Phe Ser 
1               5                   10              


<210>  7
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  7

Asp Asp Thr Ser Asp Pro Thr Tyr Thr Ser Ser Leu Gly 
1               5                   10              


<210>  8
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  8

Leu Asp Asp Phe Asp Gly Thr Tyr Glu Thr Gln Gly Gly 
1               5                   10              


<210>  9
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  9

Thr Tyr Ile Asp Pro Glu Thr Tyr Glu Asp Pro Asn Arg 
1               5                   10              


<210>  10
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  10

Gly Ala Gly Phe Gly Ser Arg Ser Leu Tyr Gly Leu Gly 
1               5                   10              


<210>  11
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  11

Asn Glu Asn Thr Glu Asp Gln Tyr Ser Leu Val Glu Asp 
1               5                   10              


<210>  12
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  12

Ala Ser Ala Ala Ser Phe Glu Tyr Thr Ile Leu Asp Pro 
1               5                   10              


<210>  13
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  13

Thr Leu Thr Thr Asn Glu Glu Tyr Leu Asp Leu Ser Gln 
1               5                   10              


<210>  14
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  14

Phe Leu Ser Glu Glu Thr Pro Tyr Ser Tyr Pro Thr Gly 
1               5                   10              


<210>  15
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  15

Ile Glu Asn Glu Glu Gln Glu Tyr Val Gln Thr Val Lys 
1               5                   10              


<210>  16
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  16

Arg Tyr Ile Glu Asp Glu Asp Tyr Tyr Lys Ala Ser Val 
1               5                   10              


<210>  17
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  17

Leu Asp Ile Asp Glu Thr Glu Tyr His Ala Asp Gly Gly 
1               5                   10              


<210>  18
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  18

Glu Tyr Glu Pro Glu Thr Val Tyr Glu Val Ala Gly Ala 
1               5                   10              


<210>  19
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  19

Glu Asp Asp Pro Glu Ala Thr Tyr Thr Thr Ser Gly Gly 
1               5                   10              


<210>  20
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  20

Val Gly Glu Glu Glu His Val Tyr Ser Phe Pro Asn Lys 
1               5                   10              


<210>  21
<211>  12
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  21

Glu Ala Ile Tyr Ala Ala Pro Phe Ala Lys Lys Lys 
1               5                   10          


<210>  22
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  22

Ser Asp Thr Glu Glu Gln Glu Tyr Glu Glu Glu Gln Pro 
1               5                   10              


<210>  23
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  23

Glu Gly Glu Glu Asp Thr Glu Tyr Met Thr Pro Ser Ser 
1               5                   10              


<210>  24
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  24

Glu Lys Ile Gly Glu Gly Thr Tyr Gly Val Val Tyr Lys 
1               5                   10              


<210>  25
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  25

Ala Ile Glu Thr Asp Lys Glu Tyr Tyr Thr Val Lys Asp 
1               5                   10              


<210>  26
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  26

Tyr Ala Ser Ser Asn Pro Glu Tyr Leu Ser Ala Ser Asp 
1               5                   10              


<210>  27
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  27

Met Glu Ser Ile Asp Asp Tyr Val Asn Val Pro Glu Ser 
1               5                   10              


<210>  28
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  28

Gly Ser Val Gln Asn Pro Val Tyr His Asn Gln Pro Leu 
1               5                   10              


<210>  29
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  29

Val Ala Asp Ile Asp Gly Gln Tyr Ala Met Thr Arg Ala 
1               5                   10              


<210>  30
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  30

Asp Glu Asp Cys Tyr Gly Asn Tyr Asp Asn Leu Leu Ser 
1               5                   10              


<210>  31
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  31

Pro Thr Ala Glu Asn Pro Glu Tyr Leu Gly Leu Asp Val 
1               5                   10              


<210>  32
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  32

Leu Asp Gly Glu Asn Ile Tyr Ile Arg His Ser Asn Leu 
1               5                   10              


<210>  33
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  33

Ser Glu His Ala Gln Asp Thr Tyr Leu Val Leu Asp Lys 
1               5                   10              


<210>  34
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  34

Arg Gln Glu Asp Gly Gly Val Tyr Ser Ser Ser Gly Leu 
1               5                   10              


<210>  35
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  35

Thr Pro Ser Asp Ser Leu Ile Tyr Asp Asp Gly Leu Ser 
1               5                   10              


<210>  36
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  36

Arg Glu Glu Ala Asp Gly Val Tyr Ala Ala Ser Gly Gly 
1               5                   10              


<210>  37
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  37

Asp Ile Tyr Lys Asp Pro Asp Tyr Val Arg Lys Gly Asp 
1               5                   10              


<210>  38
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  38

Val Ser Gln Arg Glu Ala Glu Tyr Glu Pro Glu Thr Val 
1               5                   10              


<210>  39
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  39

Ala Arg Thr Thr Ser Gln Leu Tyr Asp Ala Val Pro Ile 
1               5                   10              


<210>  40
<211>  15
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  40

Val Arg Arg Glu Val Gly Asp Tyr Gly Gln Leu His Glu Thr Glu 
1               5                   10                  15  


<210>  41
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  41

Lys Lys Asp Thr Glu Thr Val Tyr Ser Glu Val Arg Lys 
1               5                   10              


<210>  42
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  42

Ala Arg Thr Ala His Tyr Gly Ser Leu Pro Gln Lys Ser 
1               5                   10              


<210>  43
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  43

Glu Glu Ala Pro Glu Asp Leu Tyr Lys Asp Phe Leu Thr 
1               5                   10              


<210>  44
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  44

Gly Met Ser Arg Asp Val Tyr Ser Thr Asp Tyr Tyr Arg 
1               5                   10              


<210>  45
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  45

Arg Asp Met Tyr Asp Lys Glu Tyr Tyr Ser Val His Asn 
1               5                   10              


<210>  46
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  46

Tyr Ile Ser Lys Ala Glu Glu Tyr Phe Leu Leu Lys Ser 
1               5                   10              


<210>  47
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  47

Glu Gln Arg Met Lys Glu Ser Ser Phe Tyr Ser Leu Cys 
1               5                   10              


<210>  48
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  48

Lys Asp Lys Met Ala Glu Ala Tyr Ser Glu Ile Gly Met 
1               5                   10              


<210>  49
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  49

Ile Gly Thr Ala Glu Pro Asp Tyr Gly Ala Leu Tyr Glu 
1               5                   10              


<210>  50
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  50

Thr Val Asp Gly Lys Glu Ile Tyr Asn Thr Ile Arg Arg 
1               5                   10              


<210>  51
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  51

Ser Ser Asn Tyr Met Ala Pro Tyr Asp Asn Tyr Val Pro 
1               5                   10              


<210>  52
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  52

Lys Val Asp Asn Glu Asp Ile Tyr Glu Ser Arg His Glu 
1               5                   10              


<210>  53
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  53

Cys Gln Leu Gly Gln Arg Ile Tyr Gln Tyr Ile Gln Ser 
1               5                   10              


<210>  54
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  54

Tyr Met Ala Pro Tyr Asp Asn Tyr Val Pro Ser Ala Pro 
1               5                   10              


<210>  55
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  55

Arg Tyr Met Glu Asp Ser Thr Tyr Tyr Lys Ala Ser Lys 
1               5                   10              


<210>  56
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  56

Gly Ile Val Tyr Ala Val Ser Ser Asp Arg Phe Arg Ser 
1               5                   10              


<210>  57
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  57

Arg Pro Pro Ser Ala Glu Leu Tyr Ser Asn Ala Leu Pro 
1               5                   10              


<210>  58
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  58

Arg Tyr Phe Leu Asp Asp Gln Tyr Thr Ser Ser Ser Gly 
1               5                   10              


<210>  59
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  59

Ala Gln Gln Asp Gly Lys Asp Tyr Ile Val Leu Pro Ile 
1               5                   10              


<210>  60
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  60

Ala Asp Ser Glu Met Thr Gly Tyr Val Val Thr Arg Trp 
1               5                   10              


<210>  61
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  61

Thr Val Thr Ser Thr Asp Glu Tyr Leu Asp Leu Ser Ala 
1               5                   10              


<210>  62
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  62

Trp Thr Ala Ser Ser Pro Tyr Ser Thr Val Pro Pro Tyr 
1               5                   10              


<210>  63
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  63

Tyr Gln Ala Glu Glu Asn Thr Tyr Asp Glu Tyr Glu Asn 
1               5                   10              


<210>  64
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  64

Asp Tyr Asn Ser Val Val Leu Tyr Ser Thr Pro Pro Ile 
1               5                   10              


<210>  65
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  65

Asp Tyr Asn Ser Val Val Leu Tyr Ser Thr Pro Pro Ile 
1               5                   10              


<210>  66
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  66

Asp Asp Ser Ser Ala Tyr Arg Ser Val Asp Glu Val Asn 
1               5                   10              


<210>  67
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  67

Thr Ser Asn Gln Glu Tyr Leu Asp Leu Ser Met Pro Leu 
1               5                   10              


<210>  68
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  68

Glu Pro His Val Thr Arg Arg Thr Pro Asp Tyr Phe Leu 
1               5                   10              


<210>  69
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  69

Pro Arg Gly Gln Arg Asp Ser Ser Tyr Tyr Trp Glu Ile 
1               5                   10              


<210>  70
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  70

Thr Ser Phe Met Met Thr Pro Tyr Val Val Thr Arg Tyr 
1               5                   10              


<210>  71
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  71

Glu Arg Glu Gly Ser Lys Arg Tyr Cys Ile Gln Thr Lys 
1               5                   10              


<210>  72
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  72

Leu Asp Thr Ser Ser Val Leu Tyr Thr Ala Val Gln Pro 
1               5                   10              


<210>  73
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  73

Ser Ala Leu Leu Gly Asp His Tyr Val Gln Leu Pro Ala 
1               5                   10              


<210>  74
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  74

Gly Leu Ala Lys Ser Phe Gly Ser Pro Asn Arg Ala Tyr 
1               5                   10              


<210>  75
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  75

His Thr Gly Phe Leu Thr Glu Tyr Val Ala Thr Arg Trp 
1               5                   10              


<210>  76
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  76

Ile Tyr Ile Ser Pro Leu Lys Ser Pro Tyr Lys Ile Ser 
1               5                   10              


<210>  77
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  77

Lys Ser Phe Leu Asp Ser Gly Tyr Arg Ile Leu Gly Ala 
1               5                   10              


<210>  78
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  78

Phe Gly Tyr Gly Gly Arg Ala Ser Asp Tyr Lys Ser Ala 
1               5                   10              


<210>  79
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  79

Ser Lys Arg Lys Gly His Glu Tyr Thr Asn Ile Lys Tyr 
1               5                   10              


<210>  80
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  80

Lys Asp Gly Asn Gly Tyr Ile Ser Ala Ala Glu Leu Arg 
1               5                   10              


<210>  81
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  81

Lys Ile Tyr Ser Gly Asp Tyr Tyr Arg Gln Gly Cys Ala 
1               5                   10              


<210>  82
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  82

Leu Arg Thr His Asn Gly Ala Ser Pro Tyr Gln Cys Thr 
1               5                   10              


<210>  83
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  83

Gly Arg Ala Ser Asp Tyr Lys Ser Ala His Lys Gly Phe 
1               5                   10              


<210>  84
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  84

Gln Arg Ser Arg Lys Arg Leu Ser Gln Asp Ala Tyr Arg 
1               5                   10              


<210>  85
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  85

Ala Lys Ala Leu Gly Lys Arg Thr Ala Lys Tyr Arg Trp 
1               5                   10              


<210>  86
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  86

Arg Phe Arg Gln Gly Lys Asp Tyr Val Gly Ala Ile Pro 
1               5                   10              


