                         SEQUENCE LISTING

<110>  PamGene B.V.
       Stichting Het Nederlands Kanker Instituut
 
<120>  METHOD FOR PREDICTING THE RESPONSE OF NON-SMALL CELL LUNG CANCER 
       PATIENTS TO TARGETED PHARMACOTHERAPY

<130>  PAM-061-PCT

<150>  EP 09157823.7
<151>  2009-04-10

<160>  79    

<170>  PatentIn version 3.3

<210>  1
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  1

Tyr Gln Ala Glu Glu Asn Thr Tyr Asp Glu Tyr Glu Asn 
1               5                   10              


<210>  2
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  2

Val Ser Ser Asp Gly His Glu Tyr Ile Tyr Val Asp Pro 
1               5                   10              


<210>  3
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  3

Ile Gly Thr Ala Glu Pro Asp Tyr Gly Ala Leu Tyr Glu 
1               5                   10              


<210>  4
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  4

Thr Ser Phe Met Met Thr Pro Tyr Val Val Thr Arg Tyr 
1               5                   10              


<210>  5
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  5

Val Gly Glu Glu Glu His Val Tyr Ser Phe Pro Asn Lys 
1               5                   10              


<210>  6
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  6

Thr Val Asp Gly Lys Glu Ile Tyr Asn Thr Ile Arg Arg 
1               5                   10              


<210>  7
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  7

Leu Asp Asp Phe Asp Gly Thr Tyr Glu Thr Gln Gly Gly 
1               5                   10              


<210>  8
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  8

Arg Glu Glu Ala Asp Gly Val Tyr Ala Ala Ser Gly Gly 
1               5                   10              


<210>  9
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  9

Arg Gln Glu Asp Gly Gly Val Tyr Ser Ser Ser Gly Leu 
1               5                   10              


<210>  10
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  10

Gly Ala Gly Phe Gly Ser Arg Ser Leu Tyr Gly Leu Gly 
1               5                   10              


<210>  11
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  11

Ala Leu Arg Ala Asp Glu Asn Tyr Tyr Lys Ala Gln Thr 
1               5                   10              


<210>  12
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  12

Gln Arg Ser Arg Lys Arg Leu Ser Gln Asp Ala Tyr Arg 
1               5                   10              


<210>  13
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  13

Pro Thr Ala Glu Asn Pro Glu Tyr Leu Gly Leu Asp Val 
1               5                   10              


<210>  14
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  14

Glu Asp Asp Pro Glu Ala Thr Tyr Thr Thr Ser Gly Gly 
1               5                   10              


<210>  15
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  15

Glu Glu Gly Ala Pro Asp Tyr Glu Asn Leu Gln Glu Leu 
1               5                   10              


<210>  16
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  16

Glu Tyr Glu Pro Glu Thr Val Tyr Glu Val Ala Gly Ala 
1               5                   10              


<210>  17
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  17

Tyr Ala Ser Ser Asn Pro Glu Tyr Leu Ser Ala Ser Asp 
1               5                   10              


<210>  18
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  18

Arg Asp Met Tyr Asp Lys Glu Tyr Tyr Ser Val His Asn 
1               5                   10              


<210>  19
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  19

His Ile Ile Glu Asn Pro Gln Tyr Phe Ser Asp Ala Cys 
1               5                   10              


<210>  20
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  20

Ala Arg Thr Thr Ser Gln Leu Tyr Asp Ala Val Pro Ile 
1               5                   10              


<210>  21
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  21

Gly Met Ser Arg Asp Val Tyr Ser Thr Asp Tyr Tyr Arg 
1               5                   10              


<210>  22
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  22

Phe Leu Ser Glu Glu Thr Pro Tyr Ser Tyr Pro Thr Gly 
1               5                   10              


<210>  23
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  23

Lys Lys Asp Thr Glu Thr Val Tyr Ser Glu Val Arg Lys 
1               5                   10              


<210>  24
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  24

Trp Thr Ala Ser Ser Pro Tyr Ser Thr Val Pro Pro Tyr 
1               5                   10              


<210>  25
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  25

His Thr Gly Phe Leu Thr Glu Tyr Val Ala Thr Arg Trp 
1               5                   10              


<210>  26
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  26

Thr Val Thr Ser Thr Asp Glu Tyr Leu Asp Leu Ser Ala 
1               5                   10              


<210>  27
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  27

Ser Glu His Ala Gln Asp Thr Tyr Leu Val Leu Asp Lys 
1               5                   10              


<210>  28
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  28

Glu Lys Ile Gly Glu Gly Thr Tyr Gly Val Val Tyr Lys 
1               5                   10              


<210>  29
<211>  15
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  29

Pro Asn Glu Gly Asp Asn Asp Tyr Ile Ile Pro Leu Pro Asp Pro 
1               5                   10                  15  


<210>  30
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  30

Thr Tyr Ile Asp Pro Glu Thr Tyr Glu Asp Pro Asn Arg 
1               5                   10              


<210>  31
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  31

Glu Tyr Glu Asp Glu Asn Leu Tyr Glu Gly Leu Asn Leu 
1               5                   10              


<210>  32
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  32

Gly Ile Val Tyr Ala Val Ser Ser Asp Arg Phe Arg Ser 
1               5                   10              


<210>  33
<211>  15
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  33

Val Arg Arg Glu Val Gly Asp Tyr Gly Gln Leu His Glu Thr Glu 
1               5                   10                  15  


<210>  34
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  34

Arg Tyr Ile Glu Asp Glu Asp Tyr Tyr Lys Ala Ser Val 
1               5                   10              


<210>  35
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  35

Lys Val Asp Asn Glu Asp Ile Tyr Glu Ser Arg His Glu 
1               5                   10              


<210>  36
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  36

Asp Glu Asp Cys Tyr Gly Asn Tyr Asp Asn Leu Leu Ser 
1               5                   10              


<210>  37
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  37

Ile Glu Asn Glu Glu Gln Glu Tyr Val Gln Thr Val Lys 
1               5                   10              


<210>  38
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  38

Gly Leu Ala Lys Ser Phe Gly Ser Pro Asn Arg Ala Tyr 
1               5                   10              


<210>  39
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  39

Ser Gly Ala Ser Thr Gly Ile Tyr Glu Ala Leu Glu Leu 
1               5                   10              


<210>  40
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  40

Ser Ser Asn Tyr Met Ala Pro Tyr Asp Asn Tyr Val Pro 
1               5                   10              


<210>  41
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  41

Ala Glu His Gln Tyr Phe Met Thr Glu Tyr Val Ala Thr 
1               5                   10              


<210>  42
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  42

Asp Asp Ser Ser Ala Tyr Arg Ser Val Asp Glu Val Asn 
1               5                   10              


<210>  43
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  43

Ala Arg Thr Ala His Tyr Gly Ser Leu Pro Gln Lys Ser 
1               5                   10              


<210>  44
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  44

Ala Ile Glu Thr Asp Lys Glu Tyr Tyr Thr Val Lys Asp 
1               5                   10              


<210>  45
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  45

Ala Leu Gly Ala Asp Asp Ser Tyr Tyr Thr Ala Arg Ser 
1               5                   10              


<210>  46
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  46

Leu Asp Gly Glu Asn Ile Tyr Ile Arg His Ser Asn Leu 
1               5                   10              


<210>  47
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  47

Ala Lys Ala Leu Gly Lys Arg Thr Ala Lys Tyr Arg Trp 
1               5                   10              


<210>  48
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  48

Ile Ser Leu Asp Asn Pro Asp Tyr Gln Gln Asp Phe Phe 
1               5                   10              


<210>  49
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  49

Asp Phe Gly Leu Ala Arg Asp Ile Tyr Lys Asp Pro Asp 
1               5                   10              


<210>  50
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  50

Glu Glu Ala Pro Glu Asp Leu Tyr Lys Asp Phe Leu Thr 
1               5                   10              


<210>  51
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  51

Arg Phe Arg Gln Gly Lys Asp Tyr Val Gly Ala Ile Pro 
1               5                   10              


<210>  52
<211>  12
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  52

Glu Ala Ile Tyr Ala Ala Pro Phe Ala Lys Lys Lys 
1               5                   10          


<210>  53
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  53

Arg Tyr Phe Leu Asp Asp Gln Tyr Thr Ser Ser Ser Gly 
1               5                   10              


<210>  54
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  54

Ser Asp Thr Glu Glu Gln Glu Tyr Glu Glu Glu Gln Pro 
1               5                   10              


<210>  55
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  55

Ile Tyr Ile Ser Pro Leu Lys Ser Pro Tyr Lys Ile Ser 
1               5                   10              


<210>  56
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  56

Ile Val Ala Glu Asn Pro Glu Tyr Leu Ser Glu Phe Ser 
1               5                   10              


<210>  57
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  57

Asn Glu Asn Thr Glu Asp Gln Tyr Ser Leu Val Glu Asp 
1               5                   10              


<210>  58
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  58

Thr Leu Thr Thr Asn Glu Glu Tyr Leu Asp Leu Ser Gln 
1               5                   10              


<210>  59
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  59

Leu Asp Ile Asp Glu Thr Glu Tyr His Ala Asp Gly Gly 
1               5                   10              


<210>  60
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  60

Thr Pro Ser Asp Ser Leu Ile Tyr Asp Asp Gly Leu Ser 
1               5                   10              


<210>  61
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  61

Glu Arg Glu Gly Ser Lys Arg Tyr Cys Ile Gln Thr Lys 
1               5                   10              


<210>  62
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  62

Glu Gly Glu Glu Asp Thr Glu Tyr Met Thr Pro Ser Ser 
1               5                   10              


<210>  63
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  63

Arg Tyr Met Glu Asp Ser Thr Tyr Tyr Lys Ala Ser Lys 
1               5                   10              


<210>  64
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  64

Arg Pro Pro Ser Ala Glu Leu Tyr Ser Asn Ala Leu Pro 
1               5                   10              


<210>  65
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  65

Ala Asp Ser Glu Met Thr Gly Tyr Val Val Thr Arg Trp 
1               5                   10              


<210>  66
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  66

Asp Ile Tyr Lys Asp Pro Asp Tyr Val Arg Lys Gly Asp 
1               5                   10              


<210>  67
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  67

Pro Arg Gly Gln Arg Asp Ser Ser Tyr Tyr Trp Glu Ile 
1               5                   10              


<210>  68
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  68

Cys Gln Leu Gly Gln Arg Ile Tyr Gln Tyr Ile Gln Ser 
1               5                   10              


<210>  69
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  69

Leu Arg Thr His Asn Gly Ala Ser Pro Tyr Gln Cys Thr 
1               5                   10              


<210>  70
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  70

Ser Lys Arg Lys Gly His Glu Tyr Thr Asn Ile Lys Tyr 
1               5                   10              


<210>  71
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  71

Lys Ile Tyr Ser Gly Asp Tyr Tyr Arg Gln Gly Cys Ala 
1               5                   10              


<210>  72
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  72

Glu Gly Ser Phe Glu Ser Arg Tyr Gln Gln Pro Phe Glu 
1               5                   10              


<210>  73
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  73

Gly Arg Ala Ser Asp Tyr Lys Ser Ala His Lys Gly Phe 
1               5                   10              


<210>  74
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  74

Met Glu Ser Ile Asp Asp Tyr Val Asn Val Pro Glu Ser 
1               5                   10              


<210>  75
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  75

Gly Gly Thr Asp Glu Gly Ile Tyr Asp Val Pro Leu Leu 
1               5                   10              


<210>  76
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  76

Ser Leu Gly Phe Lys Arg Ser Tyr Glu Glu His Ile Pro 
1               5                   10              


<210>  77
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  77

Glu Gln Arg Met Lys Glu Ser Ser Phe Tyr Ser Leu Cys 
1               5                   10              


<210>  78
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  78

Asp Asp Thr Ser Asp Pro Thr Tyr Thr Ser Ser Leu Gly 
1               5                   10              


<210>  79
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Peptide

<400>  79

Glu Pro His Val Thr Arg Arg Thr Pro Asp Tyr Phe Leu 
1               5                   10              


