                         SEQUENCE LISTING

<110>  Martella, Vito
 
<120>  NOVEL CANINE ASTROVIRUS

<130>  1321PCT

<140>  10157102.4 - 1212
<141>  2010-03-19

<160>  11    

<170>  PatentIn version 3.3

<210>  1
<211>  237
<212>  PRT
<213>  Unknown

<220>
<223>  mamastrovirus

<400>  1

Ile Arg His Ile Lys Lys Leu Arg Trp Ser Leu Val Asn Ala Glu Gln 
1               5                   10                  15      


Arg Arg Lys Tyr Gln Lys Leu His Asp Trp Tyr Val Glu Asn Leu Val 
            20                  25                  30          


Asn Arg Thr Val Leu Leu Pro Ser Gly Glu Val Thr Glu Gln His Arg 
        35                  40                  45              


Gly Asn Pro Ser Gly Gln Phe Ser Thr Thr Met Asp Asn Asn Met Ile 
    50                  55                  60                  


Asn Thr Trp Leu Gln Ala Phe Glu Phe Ala Tyr Phe His Gly Pro Asn 
65                  70                  75                  80  


Lys Gln Leu Trp Leu Asn Tyr Asp Thr Leu Val Tyr Gly Asp Asp Arg 
                85                  90                  95      


Leu Ser Thr Thr Pro Leu Ile Pro Asp Asn Tyr Val Glu Arg Val Val 
            100                 105                 110         


Leu Met Tyr Lys Asp Val Phe Gly Met Trp Val Lys Pro Glu Lys Val 
        115                 120                 125             


Lys Ile Ser Asn Thr Ile Val Gly Leu Ser Phe Cys Gly Phe Thr Val 
    130                 135                 140                 


Asp Glu Asn Leu Glu Pro Ile Pro Thr Gln Pro Asp Lys Leu Met Ala 
145                 150                 155                 160 


Ser Leu Leu Lys Pro Ala Ser Lys Leu Pro Asp Leu Glu Ser Leu His 
                165                 170                 175     


Gly Lys Leu Leu Cys Tyr Gln Leu Leu Ser Ala Phe Leu Pro Glu Glu 
            180                 185                 190         


His Pro Phe Lys Val Tyr Val Glu Ser Cys Leu Ala Ala Thr Ser Arg 
        195                 200                 205             


Gln Leu Arg Asp Ser Gly Leu Pro Thr Arg Phe Thr Glu Glu Gln Met 
    210                 215                 220                 


His Arg Ile Trp Arg Gly Gly Pro Lys Asn Cys Asp Gly 
225                 230                 235         


<210>  2
<211>  774
<212>  PRT
<213>  Unknown

<220>
<223>  mamastrovirus


<220>
<221>  misc_feature
<222>  (495)..(495)
<223>  Xaa can be any naturally occurring amino acid

<400>  2

Met Ala Ser Lys Pro Gly Lys Asp Val Thr Val Glu Val Lys Thr Ser 
1               5                   10                  15      


Gly Thr Lys Ser Thr Ser Ser Arg Ser Lys Ser Arg Gly Arg Asn Arg 
            20                  25                  30          


Asn Val Lys Ile Thr Val Asn Ser Gln Pro Lys Thr Asn Arg Arg Arg 
        35                  40                  45              


Arg Asn Arg Pro Asn Asn Arg Gly Arg Lys Arg Val Glu Ala Val Val 
    50                  55                  60                  


Lys Arg Gln Leu Asp Lys Ala Gly Val Thr Gly Pro Arg Pro Ala Ile 
65                  70                  75                  80  


Thr Gln Thr Ala Thr Ser Thr Leu Gly Thr Ile Gly Pro Asn Thr Ser 
                85                  90                  95      


Gly Ala Val Glu Leu Glu Leu Ala Thr Phe Met Asn Pro Cys Leu Val 
            100                 105                 110         


Lys Glu Ser Thr Ala Ser Asn Ser Phe Gly Pro Ile Gln Ala Ser Ala 
        115                 120                 125             


Ala Gln Tyr Asn Leu Trp Arg Val Thr Lys Ala Gln Val Arg Leu Thr 
    130                 135                 140                 


Pro Met Val Gly Pro Ser Ala Ile Ser Gly Thr Ala Tyr Arg Val Ser 
145                 150                 155                 160 


Leu Asn Thr Ala Gly Thr Pro Ser Ser Thr Gly Trp Ser Gly Leu Gly 
                165                 170                 175     


Ala Arg Lys His Lys Asp Val Lys Val Gly Ser Met Ser Val Phe Thr 
            180                 185                 190         


Ile Thr Ala Arg Asp Met Ala Gly Pro Arg Glu Gly Trp Phe Val Thr 
        195                 200                 205             


Asn Thr Asn Glu Ser Gly Gly Glu Ser Val Gly Pro Thr Ile Glu Leu 
    210                 215                 220                 


His Ser Leu Gly Glu Thr Gln Ser Thr Tyr Gln Asn Gln Arg Tyr Thr 
225                 230                 235                 240 


Gly Pro Val Phe Leu Val Glu Leu His Cys Thr Trp Gln Phe Ser Asn 
                245                 250                 255     


Tyr Ser Ala Asn Pro Ala Leu Ala Gln Leu Glu Lys Gly Glu Asp Lys 
            260                 265                 270         


Asp Ala Gln Ile Lys Phe Glu Gly Thr Ala Gly Gln Pro Leu Thr Met 
        275                 280                 285             


Thr Val Ala Pro His Ser Ala Phe Ala Arg Ala Ile Glu Ser Arg Ser 
    290                 295                 300                 


Thr Val Pro Tyr Ser Gly Ala Gly Arg Ala Ala Gly Glu Ser Thr Ser 
305                 310                 315                 320 


Asp Thr Ile Trp Gln Ile Ala Ser Thr Ala Val Asp Ala Ala Ser Val 
                325                 330                 335     


Val Val Pro Pro Pro Phe Asn Trp Leu Ile Lys Gly Gly Trp Trp Phe 
            340                 345                 350         


Val Lys Lys Leu Ala Gly Arg Ser Arg Thr Gly Glu Ile Gln Leu Gln 
        355                 360                 365             


Val Phe Ala Ser Tyr Glu Asp Ala Gln Asn Asn Arg Pro Ala Ile Cys 
    370                 375                 380                 


Thr Gly Pro Val Ala Asp Asp Asn Pro Ser Arg Leu His Asn Val Lys 
385                 390                 395                 400 


Phe Val Gln Met Asn Ala Pro Ser Thr Gly Met Pro Pro Glu Ser Ala 
                405                 410                 415     


Leu Gly Ala Phe Ser Leu Pro Leu Pro Asp Thr Pro Ala Thr Ile Gly 
            420                 425                 430         


Asp Ser Phe Arg Leu Ile Thr Gly Val Tyr Gln Gln Phe Gln Gln Asn 
        435                 440                 445             


Pro Pro Cys Pro Thr Tyr Val Tyr His Ser Thr Asn Lys Met Val Val 
    450                 455                 460                 


Lys Val Gly Thr His Tyr Asp Glu Leu Asn Phe Val Tyr Arg Ala Thr 
465                 470                 475                 480 


Thr Pro His Ile Trp Leu Ala Gly Gly Pro Gln Thr Trp Gln Xaa Ala 
                485                 490                 495     


Asp Lys Pro Asp Glu Leu Ser Phe Met Glu Ile Gly Ile Lys Ser Gly 
            500                 505                 510         


Ser Thr Tyr Leu Lys Arg Gly Ile Val Trp Gly Tyr Ser Gln His Lys 
        515                 520                 525             


Ile Val Ser Gly Ser Glu Leu Ser Val Leu Thr Phe Tyr Val Gly Lys 
    530                 535                 540                 


Leu Asp Asn Gln Ile Arg Tyr Thr Asn Tyr Lys Lys Val Arg Tyr Leu 
545                 550                 555                 560 


Phe Thr Gly Thr Gly Ser Ser Leu Asn Leu Ala Pro Asp Ser Thr Thr 
                565                 570                 575     


Thr Asp Leu Gln Val Leu Glu Leu Asn Pro Gly Pro Trp Phe Val Phe 
            580                 585                 590         


Ala Ser Leu His Leu Val Asn Ser Ser Gln Gln Gln Ser Tyr Ile Ala 
        595                 600                 605             


Thr Glu Asn Thr Asn Arg Pro Thr Ile Val Cys Pro Val Asp Ala Gln 
    610                 615                 620                 


Asn Leu Phe Val Cys Thr Asn Asn Asn Val Ala Ser Thr Met Ser Ile 
625                 630                 635                 640 


Asp Phe Ile Arg Thr Pro Pro Val Phe Thr Gln Gln Val Glu Gln Gln 
                645                 650                 655     


Gln Val Leu Ala Leu Pro Thr Ile Lys Glu Glu Gln Leu Pro Gln Pro 
            660                 665                 670         


Ile Glu Asp Gly Phe Leu Pro Asp Ser Glu Asp Glu Asp Phe Ser Asp 
        675                 680                 685             


Asp Asp Ser Leu Leu Asp Asp Asp Asp Phe Phe Pro Ala Ser Asp Gln 
    690                 695                 700                 


Gln Val Phe Ser Ser Arg Gln Val Leu Phe Arg Ala Met Val Asn Glu 
705                 710                 715                 720 


Gly Trp Pro Glu Asp Gln Ala Glu Arg Leu Ala Lys Arg Ala Leu Pro 
                725                 730                 735     


Thr Leu Ser Glu Lys Glu Leu Arg Asp Glu Phe Leu Val Gly Leu Ala 
            740                 745                 750         


Asp Gly Phe Ser Pro Arg Gln Ala Ala Ala Asn Ala Arg Glu Lys Cys 
        755                 760                 765             


Ser Arg Gly His Ala Glu 
    770                 


<210>  3
<211>  716
<212>  DNA
<213>  Unknown

<220>
<223>  mamastrovirus

<400>  3
ttattcgaca tatcaagaaa ctccgctgga gtttggttaa tgccgaacaa aggaggaaat     60

accaaaaact tcatgattgg tatgttgaaa atctggtcaa tcgtactgtg ctacttccat    120

ctggcgaggt tacagaacaa catcgtggta atccatctgg ccaattctcc actaccatgg    180

ataacaacat gatcaacaca tggctccagg cttttgaatt tgcctatttc catggaccta    240

acaaacagct ttggctgaac tatgacactt tggtctatgg tgatgacagg ctgtcaacaa    300

ctccacttat tcctgacaac tatgttgaga gagttgtact aatgtacaaa gatgtttttg    360

gaatgtgggt caagcctgag aaagtcaaaa tttcaaacac cattgttggt ctcagttttt    420

gtggctttac tgtagatgag aatcttgaac caatacctac acaacctgat aaattgatgg    480

cctcacttct taaaccagca tctaaacttc cggatcttga atcactccat gggaaactcc    540

tgtgctatca gctcctctcg gctttcctac ctgaggaaca ccctttcaag gtgtatgtcg    600

agagttgtct ggctgccact agcaggcagc ttcgtgattc tggtttacct accagattca    660

cagaagagca aatgcatcgc atatggaggg gaggaccaaa aaattgcgat ggctag        716


<210>  4
<211>  2325
<212>  DNA
<213>  Unknown

<220>
<223>  mamastrovirus


<220>
<221>  misc_feature
<222>  (1483)..(1483)
<223>  n is a, c, g, or t

<400>  4
atggctagca agccaggcaa agatgtcacc gttgaggtta aaacctccgg aacaaaatca     60

acatcctcta ggagcaaatc ccgggggcga aaccggaatg tcaagatcac agtcaattca    120

caacccaaaa caaatcggag gagacgaaac agacctaaca atcgtggtcg caagagagtt    180

gaggctgtcg ttaaacgaca gctcgataaa gctggagtca caggaccaag gccagcgatt    240

acccaaactg ctacatctac tctgggaact attggcccga atacttcggg tgcagtagag    300

ctggaacttg caacattcat gaatccatgc ttggtcaaag agtcaacagc ttccaactct    360

tttggaccca tccaagcatc agctgcacaa tacaatctat ggagggtcac aaaagcccaa    420

gttcgcctga ctccaatggt tggcccatct gcaatctcag gtactgctta tagggtttcc    480

ctaaacaccg cgggaacccc ttcttccaca ggctggtcag gtttgggggc tagaaagcac    540

aaagatgtca aagttggctc catgtctgtt tttaccatca ctgctagaga catggctggc    600

ccacgtgaag gttggtttgt caccaacacc aatgagtcag gtggtgagtc tgttggacct    660

acaattgagt tgcactcact tggtgaaacc cagtcaacct atcaaaatca gaggtacact    720

ggacctgtct tccttgtgga attgcattgc acatggcaat tttcaaacta cagtgcaaat    780

ccagctctgg ctcagctaga gaaaggagag gacaaggacg cacaaatcaa gtttgaaggt    840

acagcaggac aaccacttac catgacagtg gcacctcact cagcttttgc cagagccatt    900

gaatcccgct ccacggttcc ctactcagga gcgggtagag ctgcaggcga atcaacttca    960

gacacaatct ggcaaattgc atctacagct gttgatgctg cttctgtggt tgttccacca   1020

cctttcaatt ggctcatcaa gggtggttgg tggtttgtta agaagctggc agggagatcg   1080

cgtacaggcg agatccaact gcaggtgttt gccagctatg aagatgctca aaataaccgc   1140

ccagccatct gcacagggcc agtagcagac gacaatccct cacgtctgca caatgtgaaa   1200

tttgttcaaa tgaatgcacc atcaacaggt atgccacctg aatctgcatt aggtgctttt   1260

agcctaccac taccagacac tccagcaact attggagaca gttttaggct cataacaggg   1320

gtataccagc aatttcaaca aaaccctccg tgtcctacct atgtttacca tagtaccaac   1380

aagatggtcg ttaaggtagg cacacactat gatgagttga attttgtcta cagagcaaca   1440

acacctcata tttggcttgc tggtggacct caaacttggc agnttgcaga caaaccagat   1500

gagctgtctt ttatggagat tgggatcaaa tcaggttcca cctacctcaa acgtggtatt   1560

gtctggggtt actcacaaca caagatagtg agtgggagcg aactaagcgt acttaccttc   1620

tatgtaggta agctggacaa ccagatacgc tatactaact acaagaaagt tcgctatctt   1680

tttactggga caggttccag tcttaatttg gcaccagatt ccacaaccac tgacctgcag   1740

gtacttgagc ttaaccctgg accctggttt gtgtttgctt ccttgcatct cgtcaactcc   1800

tcacaacagc agagctacat tgcaactgag aacacaaaca gacctacaat tgtttgccct   1860

gttgatgcgc aaaacttgtt tgtttgtacc aacaacaatg ttgccagcac aatgtcaatt   1920

gatttcatca gaacaccacc tgttttcaca caacaagtgg aacaacaaca agttcttgct   1980

cttcctacca tcaaagagga acaattgcca cagcccattg aagatggttt tctcccagat   2040

tctgaagatg aagatttttc tgatgatgat tctcttcttg atgatgatga ttttttccct   2100

gcttctgatc agcaggtttt ttccagtcgc caggtccttt tcagagcaat ggtcaatgag   2160

ggttggccag aggaccaggc tgagcgcctt gccaagcgcg ctctccctac actaagtgag   2220

aaagaactta gggatgaatt tttagtcgga cttgctgacg gcttctcgcc acgtcaagca   2280

gccgcaaatg ctcgtgaaaa gtgttcccga ggccacgccg agtag                   2325


<210>  5
<211>  3143
<212>  DNA
<213>  Unknown

<220>
<223>  mamastrovirus


<220>
<221>  misc_feature
<222>  (2191)..(2191)
<223>  n is a, c, g, or t

<400>  5
ttattcgaca tatcaagaaa ctccgctgga gtttggttaa tgccgaacaa aggaggaaat     60

accaaaaact tcatgattgg tatgttgaaa atctggtcaa tcgtactgtg ctacttccat    120

ctggcgaggt tacagaacaa catcgtggta atccatctgg ccaattctcc actaccatgg    180

ataacaacat gatcaacaca tggctccagg cttttgaatt tgcctatttc catggaccta    240

acaaacagct ttggctgaac tatgacactt tggtctatgg tgatgacagg ctgtcaacaa    300

ctccacttat tcctgacaac tatgttgaga gagttgtact aatgtacaaa gatgtttttg    360

gaatgtgggt caagcctgag aaagtcaaaa tttcaaacac cattgttggt ctcagttttt    420

gtggctttac tgtagatgag aatcttgaac caatacctac acaacctgat aaattgatgg    480

cctcacttct taaaccagca tctaaacttc cggatcttga atcactccat gggaaactcc    540

tgtgctatca gctcctctcg gctttcctac ctgaggaaca ccctttcaag gtgtatgtcg    600

agagttgtct ggctgccact agcaggcagc ttcgtgattc tggtttacct accagattca    660

cagaagagca aatgcatcgc atatggaggg gaggaccaaa aaattgcgat ggctagcaag    720

ccaggcaaag atgtcaccgt tgaggttaaa acctccggaa caaaatcaac atcctctagg    780

agcaaatccc gggggcgaaa ccggaatgtc aagatcacag tcaattcaca acccaaaaca    840

aatcggagga gacgaaacag acctaacaat cgtggtcgca agagagttga ggctgtcgtt    900

aaacgacagc tcgataaagc tggagtcaca ggaccaaggc cagcgattac ccaaactgct    960

acatctactc tgggaactat tggcccgaat acttcgggtg cagtagagct ggaacttgca   1020

acattcatga atccatgctt ggtcaaagag tcaacagctt ccaactcttt tggacccatc   1080

caagcatcag ctgcacaata caatctatgg agggtcacaa aagcccaagt tcgcctgact   1140

ccaatggttg gcccatctgc aatctcaggt actgcttata gggtttccct aaacaccgcg   1200

ggaacccctt cttccacagg ctggtcaggt ttgggggcta gaaagcacaa agatgtcaaa   1260

gttggctcca tgtctgtttt taccatcact gctagagaca tggctggccc acgtgaaggt   1320

tggtttgtca ccaacaccaa tgagtcaggt ggtgagtctg ttggacctac aattgagttg   1380

cactcacttg gtgaaaccca gtcaacctat caaaatcaga ggtacactgg acctgtcttc   1440

cttgtggaat tgcattgcac atggcaattt tcaaactaca gtgcaaatcc agctctggct   1500

cagctagaga aaggagagga caaggacgca caaatcaagt ttgaaggtac agcaggacaa   1560

ccacttacca tgacagtggc acctcactca gcttttgcca gagccattga atcccgctcc   1620

acggttccct actcaggagc gggtagagct gcaggcgaat caacttcaga cacaatctgg   1680

caaattgcat ctacagctgt tgatgctgct tctgtggttg ttccaccacc tttcaattgg   1740

ctcatcaagg gtggttggtg gtttgttaag aagctggcag ggagatcgcg tacaggcgag   1800

atccaactgc aggtgtttgc cagctatgaa gatgctcaaa ataaccgccc agccatctgc   1860

acagggccag tagcagacga caatccctca cgtctgcaca atgtgaaatt tgttcaaatg   1920

aatgcaccat caacaggtat gccacctgaa tctgcattag gtgcttttag cctaccacta   1980

ccagacactc cagcaactat tggagacagt tttaggctca taacaggggt ataccagcaa   2040

tttcaacaaa accctccgtg tcctacctat gtttaccata gtaccaacaa gatggtcgtt   2100

aaggtaggca cacactatga tgagttgaat tttgtctaca gagcaacaac acctcatatt   2160

tggcttgctg gtggacctca aacttggcag nttgcagaca aaccagatga gctgtctttt   2220

atggagattg ggatcaaatc aggttccacc tacctcaaac gtggtattgt ctggggttac   2280

tcacaacaca agatagtgag tgggagcgaa ctaagcgtac ttaccttcta tgtaggtaag   2340

ctggacaacc agatacgcta tactaactac aagaaagttc gctatctttt tactgggaca   2400

ggttccagtc ttaatttggc accagattcc acaaccactg acctgcaggt acttgagctt   2460

aaccctggac cctggtttgt gtttgcttcc ttgcatctcg tcaactcctc acaacagcag   2520

agctacattg caactgagaa cacaaacaga cctacaattg tttgccctgt tgatgcgcaa   2580

aacttgtttg tttgtaccaa caacaatgtt gccagcacaa tgtcaattga tttcatcaga   2640

acaccacctg ttttcacaca acaagtggaa caacaacaag ttcttgctct tcctaccatc   2700

aaagaggaac aattgccaca gcccattgaa gatggttttc tcccagattc tgaagatgaa   2760

gatttttctg atgatgattc tcttcttgat gatgatgatt ttttccctgc ttctgatcag   2820

caggtttttt ccagtcgcca ggtccttttc agagcaatgg tcaatgaggg ttggccagag   2880

gaccaggctg agcgccttgc caagcgcgct ctccctacac taagtgagaa agaacttagg   2940

gatgaatttt tagtcggact tgctgacggc ttctcgccac gtcaagcagc cgcaaatgct   3000

cgtgaaaagt gttcccgagg ccacgccgag taggatcgag ggtacaggtt cactttcact   3060

cttttctttt ctgtctttaa caatcactta tatagttaag ttggattagt ttaggcattg   3120

aaaaaaaaaa aaaaaaaaaa aaa                                           3143


<210>  6
<211>  23
<212>  DNA
<213>  Unknown

<220>
<223>  synthetic oligonucelotide

<400>  6
gtactatacc rtctgattta att                                             23


<210>  7
<211>  22
<212>  DNA
<213>  Unknown

<220>
<223>  synthetic oligonucelotide

<400>  7
agaccaargt gtcatagttc ag                                              22


<210>  8
<211>  17
<212>  DNA
<213>  Unknown

<220>
<223>  synthetic oligonucleotide

<400>  8
gagtgaccgc ggccgct                                                    17


<210>  9
<211>  23
<212>  DNA
<213>  Unknown

<220>
<223>  synthetic oligonucleotide

<400>  9
gtactatacc rtctgattta att                                             23


<210>  10
<211>  22
<212>  DNA
<213>  Unknown

<220>
<223>  synthetic oligonucleotide

<400>  10
agaccaargt gtcatagttc ag                                              22


<210>  11
<211>  26
<212>  DNA
<213>  Unknown

<220>
<223>  mamastrovirus


<220>
<221>  Unsure
<222>  (9)..(9)

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is a, c, g, or t

<220>
<221>  Unsure
<222>  (12)..(12)

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  n is a, c, g, or t

<220>
<221>  Unsure
<222>  (18)..(18)

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  n is a, c, g, or t

<220>
<221>  Unsure
<222>  (21)..(21)

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  n is a, c, g, or t

<220>
<221>  Unsure
<222>  (25)..(25)

<220>
<221>  misc_feature
<222>  (25)..(25)
<223>  n is a, c, g, or t

<400>  11
atttggagng gnggaccnaa natgnc                                          26


