                         SEQUENCE LISTING

<110>  Unniversit degli studi di Milano
 
<120>  A SEQUENCE SPECIFIC FOR FLAVESCENCE DOREE PHYTOPLASMA (FD), USES 
       THEREOF AND FD DIAGNOSTIC KITS

<130>  BW569R

<160>  6     

<170>  PatentIn version 3.3

<210>  1
<211>  381
<212>  DNA
<213>  Phytoplasma sp.


<220>
<221>  allele
<222>  (108)..(108)
<223>  when nucleotide 107 is C the sequence is specific for the 
       phytoplasmas sp. associated with vine Flavenscence Dore

<220>
<221>  allele
<222>  (171)..(171)
<223>  when nucleotide 171 is G the sequence is specific for the 
       phytoplasmas sp. associated with vine Flavenscence Dore

<400>  1
atgattcaag taaatacccg tttaaaagta gctgataata gtggtgctaa agaagtttta     60

gttattaata ttcctggttc aagtaaaaga cgttatgctc aaataggcga tgttgttgta    120

gtcgctatta aaaaaagtat tccatctgga atggtaaaat caggagaaaa gtctaaagct    180

ttaattttac gtactaaaaa aggcttagca ggaaaaaatg gttcttatat taaatttgat    240

gataacgcag tagttattat caaagatgat atgactttaa aagggacaag gatttttgga    300

cctgtagtta aaaatcaaaa actaaaagat agtaaatttt ctaaatttct ttctttagct    360

gaaaaagttt ttgtaatatg a                                              381


<210>  2
<211>  26
<212>  DNA
<213>  Phytoplasma sp.

<400>  2
tcctggttca agtaaaagac gttatg                                          26


<210>  3
<211>  17
<212>  DNA
<213>  Phytoplasma sp.


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  labelled with 6-FAM

<400>  3
aataggcgat gttgttg                                                    17


<210>  4
<211>  25
<212>  DNA
<213>  Phytoplasma sp.

<400>  4
cttttctcct gattttacca ttcca                                           25


<210>  5
<211>  381
<212>  DNA
<213>  Phytoplasma sp.


<220>
<221>  CDS
<222>  (1)..(381)

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is G or A

<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  n is C or G

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  n is C or T

<220>
<221>  misc_feature
<222>  (108)..(108)
<223>  n is C or T

<220>
<221>  misc_feature
<222>  (156)..(156)
<223>  n is A or G

<220>
<221>  misc_feature
<222>  (171)..(171)
<223>  n is G or A

<220>
<221>  misc_feature
<222>  (246)..(246)
<223>  n is C or T

<220>
<221>  misc_feature
<222>  (261)..(261)
<223>  n is C or T

<220>
<221>  misc_feature
<222>  (297)..(297)
<223>  n is C or T

<400>  5
atg att caa nta aat ann cgt tta aaa gta gct gat aat agt ggt gct       48
Met Ile Gln Xaa Asn Xaa Arg Leu Lys Val Ala Asp Asn Ser Gly Ala         
1               5                   10                  15              

aaa gaa gtt tta gtt att aat att cct ggt tca agt aaa aga cgt tat       96
Lys Glu Val Leu Val Ile Asn Ile Pro Gly Ser Ser Lys Arg Arg Tyr         
            20                  25                  30                  

gct caa ata ggn gat gtt gtt gta gtc gct att aaa aaa agt att cca      144
Ala Gln Ile Gly Asp Val Val Val Val Ala Ile Lys Lys Ser Ile Pro         
        35                  40                  45                      

tct gga atg gtn aaa tca gga gaa aan tct aaa gct tta att tta cgt      192
Ser Gly Met Val Lys Ser Gly Glu Xaa Ser Lys Ala Leu Ile Leu Arg         
    50                  55                  60                          

act aaa aaa ggc tta gca gga aaa aat ggt tct tat att aaa ttt gat      240
Thr Lys Lys Gly Leu Ala Gly Lys Asn Gly Ser Tyr Ile Lys Phe Asp         
65                  70                  75                  80          

gat aan gca gta gtt att atn aaa gat gat atg act tta aaa ggg aca      288
Asp Xaa Ala Val Val Ile Xaa Lys Asp Asp Met Thr Leu Lys Gly Thr         
                85                  90                  95              

agg att ttn gga cct gta gtt aaa aat caa aaa cta aaa gat agt aaa      336
Arg Ile Xaa Gly Pro Val Val Lys Asn Gln Lys Leu Lys Asp Ser Lys         
            100                 105                 110                 

ttt tct aaa ttt ctt tct tta gct gaa aaa gtt ttt gta ata tga          381
Phe Ser Lys Phe Leu Ser Leu Ala Glu Lys Val Phe Val Ile                 
        115                 120                 125                     


<210>  6
<211>  126
<212>  PRT
<213>  Phytoplasma sp.

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  The 'Xaa' at location 4 stands for Ile, Val, or Leu.

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  The 'Xaa' at location 6 stands for Lys, Asn, Arg, Ser, Thr, Ile, 
       or Met.

<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  The 'Xaa' at location 57 stands for Lys, or Asn.

<220>
<221>  misc_feature
<222>  (82)..(82)
<223>  The 'Xaa' at location 82 stands for Lys, or Asn.

<220>
<221>  misc_feature
<222>  (87)..(87)
<223>  The 'Xaa' at location 87 stands for Ile, or Met.

<220>
<221>  misc_feature
<222>  (99)..(99)
<223>  The 'Xaa' at location 99 stands for Leu, or Phe.

<400>  6

Met Ile Gln Xaa Asn Xaa Arg Leu Lys Val Ala Asp Asn Ser Gly Ala 
1               5                   10                  15      


Lys Glu Val Leu Val Ile Asn Ile Pro Gly Ser Ser Lys Arg Arg Tyr 
            20                  25                  30          


Ala Gln Ile Gly Asp Val Val Val Val Ala Ile Lys Lys Ser Ile Pro 
        35                  40                  45              


Ser Gly Met Val Lys Ser Gly Glu Xaa Ser Lys Ala Leu Ile Leu Arg 
    50                  55                  60                  


Thr Lys Lys Gly Leu Ala Gly Lys Asn Gly Ser Tyr Ile Lys Phe Asp 
65                  70                  75                  80  


Asp Xaa Ala Val Val Ile Xaa Lys Asp Asp Met Thr Leu Lys Gly Thr 
                85                  90                  95      


Arg Ile Xaa Gly Pro Val Val Lys Asn Gln Lys Leu Lys Asp Ser Lys 
            100                 105                 110         


Phe Ser Lys Phe Leu Ser Leu Ala Glu Lys Val Phe Val Ile 
        115                 120                 125     



<210>  7
<211>  126
<212>  PRT
<213>  Phytoplasma sp. FD associated strain

<400>  2

Met Ile Gln Val Asn Thr Arg Leu Lys Val Ala Asp Asn Ser Gly Ala 
1               5                   10                  15      


Lys Glu Val Leu Val Ile Asn Ile Pro Gly Ser Ser Lys Arg Arg Tyr 
            20                  25                  30          


Ala Gln Ile Gly Asp Val Val Val Val Ala Ile Lys Lys Ser Ile Pro 
        35                  40                  45              


Ser Gly Met Val Lys Ser Gly Glu Lys Ser Lys Ala Leu Ile Leu Arg 
    50                  55                  60                  


Thr Lys Lys Gly Leu Ala Gly Lys Asn Gly Ser Tyr Ile Lys Phe Asp 
65                  70                  75                  80  


Asp Asn Ala Val Val Ile Ile Lys Asp Asp Met Thr Leu Lys Gly Thr 
                85                  90                  95      


Arg Ile Phe Gly Pro Val Val Lys Asn Gln Lys Leu Lys Asp Ser Lys 
            100                 105                 110         


Phe Ser Lys Phe Leu Ser Leu Ala Glu Lys Val Phe Val Ile 
        115                 120                 125     


