                         SEQUENCE LISTING

<110>  Australian Centre for Plant Functional Genomics Pty Ltd
 
<120>  STRESS RESPONSIVE EXPRESSION

<130>  934887

<150>  AU 2011900690
<151>  2011-02-28

<160>  31    

<170>  PatentIn version 3.5

<210>  1
<211>  2331
<212>  DNA
<213>  Oryza sativa

<400>  1
caccagacgt tccaatccta ataaccctac attggagtag tacaagaact ggaaaatttg       60

ggatcatttg cataattaag cttagtaaac gacccaacgg cgcccgccgg tcaataacag      120

tggattaatc atgctattag ttgtcataaa caaacttttt attttggatg cagtattgac      180

tcgtgcggcg agagtagtct tccccaaaag tatttctagt caaaatttgg caaaaaccta      240

agctattgta tagtacaaaa agctctttcc ggatgtttga tttgatttaa tttaagaggt      300

taatctaggg cccctcaagt ttggagctca ccaaaccagg aaagacacca agaaaacata      360

gtactgtact aactatgtgc atcacaccta ccctgctcta caagatactc tagtactata      420

gctactttgc ccagttgcac taggaattaa gcataggggg gaaatgaaat cggaacggga      480

gtcaaaaaaa aaaaaaaagc aacctaggag cgaatctgga caaacctctg tctagattcg      540

tggtagtagg agggtcacat cccttcctac attgcttatt ttgggacaga gggagtacac      600

catccacaaa tatgtgagat tttaggttat tttagcaaaa tttaaggtta agtggaaatt      660

aattgatgcc tcagataatt tacttgatta gaaaaatcac gcctaatgat ttaactacca      720

gtgaataata aatgtagcta ttgtatttgc aaacaaaatt taaaacctga aaatgtttat      780

attcgtgtat ggagagagtg tttttctaat aaaacacata aagccaagaa aatgagtttc      840

tagtagagtt gaaaagggga agaattaaga ggttagacac tgatccagct aagttattat      900

tggcaagtgc atgctcactg acaagcaagg gtccaaaagg tggtactcct tccgttttga      960

aatatttgac gccgttgact ttttagcaca tgtttaaccg ttcgtcttat tcaaaaaatt     1020

taaataatta ttaattcttt tcctatcatt tgattcattg ttaaatatat ttttatatag     1080

gcatataact ttacatattt tacagaagtt tttaaataag acaaatggtc aaacatatgc     1140

taaaaaatca atggtgttaa atattttgaa acgggggagt atttagtagt agggggtcaa     1200

gaagtcttgc atgtcccctt cttcctccaa cttcttcttt gccaattgca aggcatgcag     1260

atagggatct ttattaatag caggcatgtg tggtgtattt tcttgacttt ggaccctgcc     1320

ccactatcca gcccaaagac catgcatcat gctgctggcc gacatcctga ctagtctccc     1380

acccactcgt tattacatcc cctaattaat taatcatttc tattttgaca agataaacca     1440

tacctttctc taaaatatag agatttctaa tatttatact ttggactatt tggtagagtt     1500

tcaactccta aatttagctt cagaagtaat taagtctaaa ttagaattgt gaagcaacct     1560

aaacctagtt ccaactctta attttatttt gtgagagagc tccacccaac tctatttcta     1620

ttttaggtgg agctgaaatt gtttggttga gctggagctg tgccaaacag gctctttatc     1680

taaaatatag ctatttcttc ttgtgctatg tcatatcaaa caattataac aatgttttat     1740

ttaatttatc tctatatatt ttatttcaaa taatcataac catcttttgt taaattataa     1800

aacgtcttat ccactcaaaa accctagtaa tattttaaaa cgagtattat gaaatgacga     1860

gatgacaaac acaagaacta gagggatgtg gtttttattt ttgttttaaa aaataataat     1920

tcagttggcg ccgctagctg ttccggtcac cctccagtct ccttccgatt cttccgccac     1980

atccgcatgc tcgaattccc cctccctcca tttctttact catttccctt cccctccgct     2040

tcctaatcct gcgtgacccc agacgacgac gacgacgagt acacatgcgt ttgagcgcga     2100

catccccgcg cgcgccttct tcttcctctt cctccctcct cccatgacta gaccatcctc     2160

gccatattcc cgcctctcta tatatattag ggctcagctc ctcctctcac ctcgtctcct     2220

cctctcctct cttctctcct tggctcagct tgacatcgtc ggagcagcag aaaagtttgc     2280

tcgatcgagc tagctaacta ggtcgtcgga tcagtgataa atcgttcgcc g              2331


<210>  2
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  OsWRKY71F primer nucleotide sequence - promoter amplification

<400>  2
gccaagcttc ttagtaaacg acccaac                                           27


<210>  3
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  OsWRKY71R primer nucleotide sequence - promoter amplification

<400>  3
cccggtaccc ggcgaacgat ttatcac                                           27


<210>  4
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TaCor39F primer sequence - TdCor39 amplification

<400>  4
atggagaacc aggcacacat c                                                 21


<210>  5
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TaCor39R primer sequence - TdCor39 amplification

<400>  5
ggtcattcca gtgtgtgcat                                                   20


<210>  6
<211>  2207
<212>  DNA
<213>  Triticum durum

<400>  6
ttggagtggg caaagacgat gtggcttaac agaggtcagt gcaggatttg aagaagatgg       60

aagaagaaca agaagcagca ggagcagtag cagaagcaga agtagaagaa gaggagagga      120

agagaaagat ctggtagcac cgatgaacta gcccctattt agctaatggc tcttaataat      180

ttgaactgtc atttgatagt agttaggatg aaccgtcatt tgtttaagta gatggcgcta      240

catattcaga ttctgtgtgg caagctcacc actagttaga agtgatgaca acaccttatg      300

caggttgcaa ccaaacacca tgtcatatgt gcgcctaatg caatgcgggc aaccaaacgc      360

cgggtcgaaa atggttatct catgcaacta agggcatgca ggcaatcaaa ctatgtgcat      420

ctgatttttt ttggcctgca tcccctcaaa ccggctcaat agagccagcc tcgccggacc      480

aggctgaatc agcaatgtaa ccaaacacgc cctagtgatt caacatattt ctaactcata      540

tttttagaat aacagggagt gagctgagtt ccccggctcc acaacagcgt tttaggacag      600

accccccccc ccccccccct aatgtgcttc gatcccactg tttttcctac gcgtggctgc      660

agtttaccat ccagcaacgg ctcatgtggt tgcgtcgcgc ttgaatcata ccgcctctga      720

tgataactga aagtctgaaa ttaccatagg tcaagtgcga gtgtaggatg aaaaaagtgt      780

ctataaattg cttcaatatt tttgttgtgc tttgtttata tagaaagcaa gtcatatgct      840

gctctgatat gagattattg cataaacata ttaacttttt ttatcttaaa attatatcta      900

tgtatggagg tgctactgtt gctggcggca gcacttccag ttttcagttg agaccagata      960

attgtgatcg atttcacccc ctcttttggg tcatctgttc ttacttctgc tttggctcac     1020

cagcattcat ctagtgtgaa tccccaacct gcatttaaat actgcactga atatctatag     1080

tctagcaaat caagtttgtt tgatgcaaaa attctgagga tgttgctctc tgctattgtc     1140

ttcgcaaatt gcctgcttca cggttttgac ttcattgtgg ttgtgtttct ttactgctaa     1200

aatacgaagg attgtagaca tgtcctgaat cctatgaatt agaaaactac atgagttcga     1260

ataaaagatt gtttgatatt atccctataa aagcaaagga agtctacaaa gatatttcag     1320

tggatgcgca tttttctcca gaataaagtg caaatgaatt ttaaggaaaa ttactaaaca     1380

tttcaatcct ataaatcaaa cagcaacata gagtgtacat ttggcttcaa aatttgtcca     1440

caaaagagtg tacttctatc ttctcaatgc actttaaagt agaaaaacat acttctctct     1500

catcacatgg taatcaagac aagtaacaat ctacacatga tctttttaat ttctacatac     1560

acttagctca ttagggttgg ataattaaag atgagagaga tgatggcttg catctttcca     1620

atacattttt tacttcactt cataatttgt tttaaaatct ctaaggacaa attaccggac     1680

ggagagagta aatcgtctaa aaatcctata ataatttctt ttgaatcaaa gcccttagct     1740

tctcgtatgc ttcgtcgtta catgccgaca ctttggatct tccatcctct tatcttaagc     1800

aaacaatacc atttttgcaa gcgaaaagaa ggatcagatt tttcggggaa tcatcttctt     1860

cccggccgga cgaggacgaa tgagctggga cgtggcgccc gggacgcgcc aactagctta     1920

agaggcccgg cccctctagt cggcagccat ctgccgacca ccgatgccac cgcacgtagc     1980

gcccagccgc ggcgattcgt ccatctgacc acccctcttt atgggctagt cggcactcac     2040

ctgcccgtcc actcacgacc gcgcacgtcg tgcttcgtct accctccacc ggcctataaa     2100

tactggcccg tgctgcacat actttgcaca accacctgct tcacacagcc aagagaagta     2160

aacacatcag cactagtaga tttcacgagt cagaagctca gcgcaag                   2207


<210>  7
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TdCor39F primer sequence - promoter amplification

<400>  7
cacctgttac aagatagcat c                                                 21


<210>  8
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TdCor39R primer sequence - promoter amplification

<400>  8
cttgcgctga gcttctgact c                                                 21


<210>  9
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  PF3' primer sequence

<400>  9
gtatctcgca tatggacgga g                                                 21


<210>  10
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  NTR5' primer sequence

<400>  10
ttgccaaatg tttgaacgat c                                                 21


<210>  11
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HPF primer sequence - Q-PCR normalisation (barley and wheat)

<400>  11
attttccagt cacctggccc                                                   20


<210>  12
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HPR primer sequence - Q-PCR normalisation (barley and wheat)

<400>  12
tgctatctgg ctcagctgc                                                    19


<210>  13
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TMBW probe sequence - TaqMan probe (barley and wheat)


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' label - CAL fluor Gold 540

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  3' label - BHQ1

<400>  13
atggtggaag ggcggctgtg a                                                 21


<210>  14
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  SPSF primer sequence - Q-PCR normalisation (rice)

<400>  14
ttgcgcctga acggatat                                                     18


<210>  15
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  SPSR primer sequence - Q-PCR normalisation (rice)

<400>  15
cggttgatct tttcgggatg                                                   20


<210>  16
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TMR probe sequence - TaqMan probe (rice)


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' label - FAM

<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  3' label - BHQ1

<400>  16
gacgcacgga cggctcgga                                                    19


<210>  17
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HygF primer sequence - Q-PCR transgene analysis

<400>  17
cgctcgtctg gctaagatcg                                                   20


<210>  18
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HygR primer sequence - Q-PCR transgene analysis

<400>  18
agggtgtcac gttgcaagac                                                   20


<210>  19
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TMTr probe sequence - TaqMan probe (transgene)


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' label - FAM

<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  3' label - BHQ1

<400>  19
tgcctgaaac cgaactgccc gctg                                              24


<210>  20
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TaDREB3F primer sequence - endogene Q-PCR

<400>  20
ctcgattcgc ttgctcctca g                                                 21


<210>  21
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TaDREB3R primer sequence - endogene Q-PCR

<400>  21
tcctgatgac aagctgtagt gtgc                                              24


<210>  22
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TxDREB3F primer sequence - transgene Q-PCR

<400>  22
gtatctcgca tatggacgga g                                                 21


<210>  23
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TxDREB3R primer sequence - transgene Q-PCR

<400>  23
ttgccaaatg tttgaacgat c                                                 21


<210>  24
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvCor14BF primer sequence - cold-responsive Q-PCR

<400>  24
ttgaggatgt gagcaaatga g                                                 21


<210>  25
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvCor14BR primer sequence - cold-responsive Q-PCR

<400>  25
tacatcgtca atgacgagac c                                                 21


<210>  26
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvDhn8F primer sequence - cold-responsive Q-PCR

<400>  26
gcgagcacaa gcccagag                                                     18


<210>  27
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvDhn8R primer sequence - cold-responsive Q-PCR

<400>  27
gcccagcaat aaaccaatac aca                                               23


<210>  28
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvDhn5F primer sequence - cold-responsive Q-PCR

<400>  28
tggcgaagtt ccaccgtatg c                                                 21


<210>  29
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvDhn5R primer sequence - cold-responsive Q-PCR

<400>  29
acgaaaactg ttgccacact g                                                 21


<210>  30
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvA22F primer sequence - cold-responsive Q-PCR

<400>  30
gctcctcacc cacctccact cc                                                22


<210>  31
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  HvA22R primer sequence - cold-responsive Q-PCR

<400>  31
ctgagctgct ccctgacgac ctt                                               23


