                         SEQUENCE LISTING

<110>  Universittsklinikum Hamburg-Eppendorf et al.
 
<120>  Polyoma virus JC peptides and proteins in vaccination and 
       diagnostic applications

<130>  P88874

<140>  11006031.6
<141>  2011-07-22

<160>  92    

<170>  PatentIn version 3.5

<210>  1
<211>  15
<212>  PRT
<213>  JC virus

<400>  1

Ala Gln Arg Ile Leu Ile Phe Leu Leu Glu Phe Leu Leu Asp Phe 
1               5                   10                  15  


<210>  2
<211>  15
<212>  PRT
<213>  JC virus

<400>  2

Val Asp Ser Ile Thr Glu Val Glu Cys Phe Leu Thr Pro Glu Met 
1               5                   10                  15  


<210>  3
<211>  15
<212>  PRT
<213>  JC virus

<400>  3

His Leu Arg Gly Phe Ser Lys Ser Ile Ser Ile Ser Asp Thr Phe 
1               5                   10                  15  


<210>  4
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  4

Ile Ser Asp Thr Phe Glu Ser Asp Ser Pro Asn Arg Asp Met Leu 
1               5                   10                  15  


<210>  5
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  5

Ile Ser Asp Thr Phe Glu Ser Asp Ser Pro Asn Phe Asp Met Leu 
1               5                   10                  15  


<210>  6
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  6

Ile Ser Asp Thr Phe Glu Ser Asp Ser Pro Asn Lys Asp Met Leu 
1               5                   10                  15  


<210>  7
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  7

Asn Arg Asp Met Leu Pro Cys Tyr Ser Val Ala Arg Ile Pro Leu 
1               5                   10                  15  


<210>  8
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  8

Asn Phe Asp Met Leu Pro Cys Tyr Ser Val Ala Arg Ile Pro Leu 
1               5                   10                  15  


<210>  9
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  9

Asn Lys Asp Met Leu Pro Cys Tyr Ser Val Ala Arg Ile Pro Leu 
1               5                   10                  15  


<210>  10
<211>  15
<212>  PRT
<213>  JC virus

<400>  10

Tyr Ser Val Ala Arg Ile Pro Leu Pro Asn Leu Asn Glu Asp Leu 
1               5                   10                  15  


<210>  11
<211>  15
<212>  PRT
<213>  JC virus

<400>  11

Leu Asn Glu Asp Leu Thr Cys Gly Asn Ile Leu Met Trp Glu Ala 
1               5                   10                  15  


<210>  12
<211>  15
<212>  PRT
<213>  JC virus

<400>  12

Leu Met Trp Glu Ala Val Thr Leu Lys Thr Glu Val Ile Gly Val 
1               5                   10                  15  


<210>  13
<211>  15
<212>  PRT
<213>  JC virus

<400>  13

Leu Lys Thr Glu Val Ile Gly Val Thr Ser Leu Met Asn Val His 
1               5                   10                  15  


<210>  14
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  14

Leu Lys Thr Glu Val Ile Gly Val Thr Thr Leu Met Asn Val His 
1               5                   10                  15  


<210>  15
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of jcv peptide

<400>  15

Leu Lys Thr Glu Val Ile Gly Val Thr Ala Leu Met Asn Val His 
1               5                   10                  15  


<210>  16
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  variant of jcv peptide

<400>  16

Leu Met Asn Val His Ser Asn Gly Gln Ala Thr His 
1               5                   10          


<210>  17
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  variant of jcv peptide

<400>  17

Leu Met Asn Val His Ser Asn Gly Gln Ala Ala His 
1               5                   10          


<210>  18
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  18

Leu Met Asn Val His Ser Asn Gly Gln Ala Ser His 
1               5                   10          


<210>  19
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  19

Ser Asn Gly Gln Ala Thr His Asp Asn Gly Ala Gly Lys Pro Val 
1               5                   10                  15  


<210>  20
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  20

Ser Asn Gly Gln Ala Ala His Asp Asn Gly Ala Gly Lys Pro Val 
1               5                   10                  15  


<210>  21
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  21

Ser Asn Gly Gln Ala Ser His Asp Asn Gly Ala Gly Lys Pro Val 
1               5                   10                  15  


<210>  22
<211>  15
<212>  PRT
<213>  JC virus

<400>  22

Ala Gly Lys Pro Val Gln Gly Thr Ser Phe His Phe Phe Ser Val 
1               5                   10                  15  


<210>  23
<211>  15
<212>  PRT
<213>  JC virus

<400>  23

His Phe Phe Ser Val Gly Gly Glu Ala Leu Glu Leu Gln Gly Val 
1               5                   10                  15  


<210>  24
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  24

Ala Leu Glu Leu Gln Gly Val Leu Phe Asn Tyr Arg Thr Lys Tyr 
1               5                   10                  15  


<210>  25
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  25

Ala Leu Glu Leu Gln Gly Val Leu Phe Asn Tyr Arg Thr Thr Tyr 
1               5                   10                  15  


<210>  26
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  26

Tyr Arg Thr Lys Tyr Pro Asp Gly Thr Ile Phe Pro Lys Asn Ala 
1               5                   10                  15  


<210>  27
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  27

Tyr Arg Thr Thr Tyr Pro Asp Gly Thr Ile Phe Pro Lys Asn Ala 
1               5                   10                  15  


<210>  28
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  28

Tyr Arg Thr Thr Tyr Pro His Gly Thr Ile Phe Pro Lys Asn Ala 
1               5                   10                  15  


<210>  29
<211>  16
<212>  PRT
<213>  JC virus

<400>  29

Phe Pro Lys Asn Ala Thr Val Gln Ser Gln Val Met Asn Thr Glu His 
1               5                   10                  15      


<210>  30
<211>  15
<212>  PRT
<213>  JC virus

<400>  30

Met Asn Thr Glu His Lys Ala Tyr Leu Asp Lys Asn Lys Ala Tyr 
1               5                   10                  15  


<210>  31
<211>  16
<212>  PRT
<213>  JC virus

<400>  31

Lys Asn Lys Ala Tyr Pro Val Glu Cys Trp Val Pro Asp Pro Thr Arg 
1               5                   10                  15      


<210>  32
<211>  15
<212>  PRT
<213>  JC virus

<400>  32

Pro Asp Pro Thr Arg Asn Glu Asn Thr Arg Tyr Phe Gly Thr Leu 
1               5                   10                  15  


<210>  33
<211>  15
<212>  PRT
<213>  JC virus

<400>  33

Asn Thr Arg Tyr Phe Gly Thr Leu Thr Gly Gly Glu Asn Val Pro 
1               5                   10                  15  


<210>  34
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  34

Gly Glu Asn Val Pro Pro Val Leu His Ile Thr Asn Thr Ala Thr 
1               5                   10                  15  


<210>  35
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  35

Gly Glu Asn Val Pro Ser Val Leu His Ile Thr Asn Thr Ala Thr 
1               5                   10                  15  


<210>  36
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  36

Gly Glu Asn Val Pro Pro Val Leu His Ile Thr Lys Thr Ala Thr 
1               5                   10                  15  


<210>  37
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  37

Ile Thr Asn Thr Ala Thr Thr Val Leu Leu Asp Glu Phe Gly Val 
1               5                   10                  15  


<210>  38
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  38

Ile Thr Lys Thr Ala Thr Thr Val Leu Leu Asp Glu Phe Gly Val 
1               5                   10                  15  


<210>  39
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  39

Asp Glu Phe Gly Val Gly Pro Leu Cys Lys Gly Asp Asn Leu Tyr 
1               5                   10                  15  


<210>  40
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  40

Asp Glu Phe Gly Val Arg Pro Leu Cys Lys Gly Asp Asn Leu Tyr 
1               5                   10                  15  


<210>  41
<211>  15
<212>  PRT
<213>  JC virus

<400>  41

Gly Asp Asn Leu Tyr Leu Ser Ala Val Asp Val Cys Gly Met Phe 
1               5                   10                  15  


<210>  42
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  42

Val Cys Gly Met Phe Thr Asn Arg Ser Gly Ser Gln Gln Trp Arg 
1               5                   10                  15  


<210>  43
<211>  15
<212>  PRT
<213>  JC virus

<400>  43

Arg Val Asp Asp Gly Gln Pro Met Tyr Gly Met Asp Ala Gln Val 
1               5                   10                  15  


<210>  44
<211>  14
<212>  PRT
<213>  JC virus

<400>  44

Met Ala Gln Val Glu Glu Val Arg Val Phe Glu Gly Thr Glu 
1               5                   10                  


<210>  45
<211>  15
<212>  PRT
<213>  JC virus

<400>  45

Gly Asp Pro Asp Met Met Arg Tyr Val Asp Lys Tyr Gly Gln Leu 
1               5                   10                  15  


<210>  46
<211>  15
<212>  PRT
<213>  JC virus

<400>  46

Met Gly Ala Ala Leu Ala Leu Leu Gly Asp Leu Val Ala Thr Val 
1               5                   10                  15  


<210>  47
<211>  14
<212>  PRT
<213>  JC virus

<400>  47

Leu Val Ala Thr Val Ser Glu Ala Ala Ala Ala Thr Gly Phe 
1               5                   10                  


<210>  48
<211>  15
<212>  PRT
<213>  JC virus

<400>  48

Ala Ala Thr Gly Phe Ser Val Ala Glu Ile Ala Ala Gly Glu Ala 
1               5                   10                  15  


<210>  49
<211>  13
<212>  PRT
<213>  JC virus

<400>  49

Ala Ala Gly Glu Ala Ala Ala Thr Ile Val Glu Ile Ala 
1               5                   10              


<210>  50
<211>  13
<212>  PRT
<213>  JC virus

<400>  50

Glu Val Glu Ile Ala Ser Leu Ala Thr Val Glu Gly Ile 
1               5                   10              


<210>  51
<211>  15
<212>  PRT
<213>  JC virus

<400>  51

Thr Val Glu Gly Ile Thr Ser Thr Ser Glu Ala Ile Ala Ala Ile 
1               5                   10                  15  


<210>  52
<211>  15
<212>  PRT
<213>  JC virus

<400>  52

Ala Ile Ala Ala Ile Gly Leu Thr Pro Glu Thr Tyr Ala Val Ile 
1               5                   10                  15  


<210>  53
<211>  15
<212>  PRT
<213>  JC virus

<400>  53

Thr Tyr Ala Val Ile Thr Gly Ala Pro Gly Ala Val Ala Gly Phe 
1               5                   10                  15  


<210>  54
<211>  12
<212>  PRT
<213>  JC virus

<400>  54

Ala Val Ala Gly Phe Ala Ala Leu Val Gln Thr Val 
1               5                   10          


<210>  55
<211>  14
<212>  PRT
<213>  JC virus

<400>  55

Leu Val Gln Thr Val Thr Gly Gly Ser Ala Ile Ala Gln Leu 
1               5                   10                  


<210>  56
<211>  15
<212>  PRT
<213>  JC virus

<400>  56

Phe Ala Asp Ser Lys Asn Gln Lys Ser Ile Cys Gln Gln Ala Val 
1               5                   10                  15  


<210>  57
<211>  14
<212>  PRT
<213>  JC virus

<400>  57

Cys Gln Gln Ala Val Asp Thr Val Ala Ala Lys Gln Arg Val 
1               5                   10                  


<210>  58
<211>  15
<212>  PRT
<213>  JC virus

<400>  58

Ala Lys Gln Arg Val Asp Ser Ile His Met Thr Arg Glu Glu Met 
1               5                   10                  15  


<210>  59
<211>  14
<212>  PRT
<213>  JC virus

<400>  59

Thr Arg Glu Glu Met Leu Val Glu Arg Phe Asn Phe Leu Leu 
1               5                   10                  


<210>  60
<211>  15
<212>  PRT
<213>  JC virus

<400>  60

Ile Phe Gly Ala His Gly Asn Ala Val Leu Glu Gln Tyr Met Ala 
1               5                   10                  15  


<210>  61
<211>  14
<212>  PRT
<213>  JC virus

<400>  61

Glu Gln Tyr Met Ala Gly Val Ala Trp Ile His Cys Leu Leu 
1               5                   10                  


<210>  62
<211>  15
<212>  PRT
<213>  JC virus

<400>  62

Val Ile Tyr Asp Phe Leu Lys Cys Ile Val Leu Asn Ile Pro Lys 
1               5                   10                  15  


<210>  63
<211>  15
<212>  PRT
<213>  JC virus

<400>  63

Leu Asn Ile Pro Lys Lys Arg Tyr Trp Leu Phe Lys Gly Pro Ile 
1               5                   10                  15  


<210>  64
<211>  15
<212>  PRT
<213>  JC virus

<400>  64

Val Phe Glu Asp Val Lys Gly Thr Gly Ala Glu Ser Arg Asp Leu 
1               5                   10                  15  


<210>  65
<211>  14
<212>  PRT
<213>  JC virus

<400>  65

Glu Ser Arg Asp Leu Pro Ser Gly His Gly Ile Ser Asn Leu 
1               5                   10                  


<210>  66
<211>  16
<212>  PRT
<213>  JC virus

<400>  66

Gly Ile Ser Asn Leu Asp Cys Leu Arg Asp Tyr Leu Asp Gly Ser Val 
1               5                   10                  15      


<210>  67
<211>  15
<212>  PRT
<213>  JC virus

<400>  67

Asp Tyr Leu Asp Gly Ser Val Lys Val Asn Leu Glu Arg Lys His 
1               5                   10                  15  


<210>  68
<211>  15
<212>  PRT
<213>  JC virus

<400>  68

Val Asn Leu Glu Arg Lys His Gln Asn Lys Arg Thr Gln Val Phe 
1               5                   10                  15  


<210>  69
<211>  14
<212>  PRT
<213>  JC virus

<400>  69

Cys Thr Phe His Ile Cys Lys Gly Phe Gln Cys Phe Lys Lys 
1               5                   10                  


<210>  70
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  70

Val Gly Cys Asp Phe Pro Pro Asn Ser Asp Thr Leu Tyr Cys Lys 
1               5                   10                  15  


<210>  71
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  71

Val Ser Cys Asp Phe Pro Pro Asn Ser Asp Thr Leu Tyr Cys Lys 
1               5                   10                  15  


<210>  72
<211>  15
<212>  PRT
<213>  JC virus

<400>  72

Arg Lys Phe Leu Arg Ser Ser Pro Leu Val Trp Ile Asp Cys Tyr 
1               5                   10                  15  


<210>  73
<211>  14
<212>  PRT
<213>  JC virus

<400>  73

Trp Ile Asp Cys Tyr Cys Phe Asp Cys Phe Arg Gln Trp Phe 
1               5                   10                  


<210>  74
<211>  15
<212>  PRT
<213>  JC virus

<400>  74

Phe Arg Gln Trp Phe Gly Cys Asp Leu Thr Gln Glu Ala Leu His 
1               5                   10                  15  


<210>  75
<211>  14
<212>  PRT
<213>  JC virus

<400>  75

Asp Leu Thr Gln Glu Ala Leu His Cys Trp Glu Lys Val Leu 
1               5                   10                  


<210>  76
<211>  15
<212>  PRT
<213>  JC virus

<400>  76

Trp Glu Lys Val Leu Gly Asp Thr Pro Tyr Arg Asp Leu Lys Leu 
1               5                   10                  15  


<210>  77
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  77

His Phe Arg Gly Phe Ser Lys Ser Ile Ser Ile Ser Asp Thr Phe 
1               5                   10                  15  


<210>  78
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  78

Val Cys Gly Met Phe Thr Asn Arg Ser Gly Tyr Gln Gln Trp Arg 
1               5                   10                  15  


<210>  79
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  79

His Leu Arg Gly Phe Ser Asn Ser Ile Ser Ile Ser Asp Thr Phe 
1               5                   10                  15  


<210>  80
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  80

His Leu Arg Gly Phe Ser Lys Ser Ile Ser Ile Ser His Thr Phe 
1               5                   10                  15  


<210>  81
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  81

Ile Ser His Thr Phe Glu Ser Asp Ser Pro Asn Arg Asp Met Leu 
1               5                   10                  15  


<210>  82
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  82

Gly Glu Asn Ile Pro Pro Val Leu His Ile Thr Asn Thr Ala Thr 
1               5                   10                  15  


<210>  83
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  83

Val Cys Gly Met Phe Thr Asp Arg Ser Gly Ser Gln Gln Trp Arg 
1               5                   10                  15  


<210>  84
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  84

Val Cys Gly Met Phe Thr Asn Arg Phe Gly Ser Gln Gln Trp Arg 
1               5                   10                  15  


<210>  85
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  85

Val Cys Gly Met Phe Thr Asn Arg Ser Gly Ser Gln His Trp Arg 
1               5                   10                  15  


<210>  86
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  86

His Leu Arg Gly Phe Ser Lys Leu Ile Ser Ile Ser Asp Thr Phe 
1               5                   10                  15  


<210>  87
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  87

His Leu Arg Gly Phe Ser Glu Ser Ile Ser Ile Ser Asp Thr Phe 
1               5                   10                  15  


<210>  88
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  88

Val Cys Gly Met Phe Thr His Arg Ser Gly Ser Gln Gln Trp Arg 
1               5                   10                  15  


<210>  89
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  89

Val Cys Gly Met Phe Thr Thr Arg Ser Gly Ser Gln Gln Trp Arg 
1               5                   10                  15  


<210>  90
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  90

Val Cys Gly Met Phe Thr Asn Arg Tyr Gly Ser Gln Gln Trp Arg 
1               5                   10                  15  


<210>  91
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  91

Val Cys Gly Met Phe Thr Asn Arg Leu Gly Ser Gln Gln Trp Arg 
1               5                   10                  15  


<210>  92
<211>  15
<212>  PRT
<213>  artificial

<220>
<223>  variant of JCV peptide

<400>  92

Val Cys Gly Met Phe Thr Asn Arg Ser Gly Cys Gln Gln Trp Arg 
1               5                   10                  15  


