                         SEQUENCE LISTING

<110>  THE REGENTS OF THE UNIVERSITY OF COLORADO
       Garcia, Marileila Varella
       Doebele, Robert C.
       Xu, Liang Guo
       Le, Ahn T.
 
<120>  Detection of Activating RET fusions in Cancer

<130>  2848-140-PCT

<140>  not yet assigned
<141>  2013-04-25

<150>  61/638,452
<151>  2012-04-25

<160>  24    

<170>  PatentIn version 3.5

<210>  1
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET-2381R

<400>  1
caggccccat acaatttgat                                                   20


<210>  2
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B 2265F

<400>  2
agccacagat caggaaaaga                                                   20


<210>  3
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B-1241F

<400>  3
ctgatgctga aagaagaaag tgt                                               23


<210>  4
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B-867F

<400>  4
attaggtggc aactgtagaa cc                                                22


<210>  5
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B-272F

<400>  5
agacacacac aatggagggt a                                                 21


<210>  6
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, CCDC6-197F

<400>  6
tgcagcaaga gaacaaggtg                                                   20


<210>  7
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET-2746R

<400>  7
taactggaat ccgaccctgg                                                   20


<210>  8
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET-2271F

<400>  8
gaagatgctg aaagagaacg c                                                 21


<210>  9
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET-2208R

<400>  9
tccaaattcg ccttctccta                                                   20


<210>  10
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET-2605F

<400>  10
aagctcgttc atcgggact                                                    19


<210>  11
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B 5' (A) BAC clone RP11-367F12, forward

<400>  11
catggtttcg taagggcttg gtgt                                              24


<210>  12
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B 5' (A) BAC clone RP11-367F12, reverse

<400>  12
acatgaggtc caataaatgc cgcc                                              24


<210>  13
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B 5' (B) BAC clone RP11-166N17, forward

<400>  13
agttgggttc ggacaccagg ataa                                              24


<210>  14
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, KIF5B 5' (B) BAC clone RP11-166N17, reverse

<400>  14
caatgtgctg aaagtcagtg ccca                                              24


<210>  15
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 5' (C) BAC clone RP13-397N12, forward

<400>  15
agggcatttc aggatcaaag gctg                                              24


<210>  16
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 5' (C) BAC clone RP13-397N12, reverse

<400>  16
tcgagagcca agttcatagc agca                                              24


<210>  17
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer, RET 5' (D) BAC clone RP13-368N15, forward

<400>  17
ctgtggcaac gacagttcca tgat                                              24


<210>  18
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 5' (D) BAC clone RP13-368N15, reverse

<400>  18
atgcccaaag cctgactctg tga                                               23


<210>  19
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 5' (E) BAC clone CTD-3181E16, forward

<400>  19
tgtacctgca cacacttctg ccta                                              24


<210>  20
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 5' (E) BAC clone CTD-3181E16, reverse

<400>  20
tgagtgaagc cagacaacag tcca                                              24


<210>  21
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 3' (F) BAC clone RP11-322A19, forward

<400>  21
atgaaggtgc gtgcatatgg ct                                                22


<210>  22
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 3' (F) BAC clone RP11-322A19, reverse

<400>  22
gggacaagcc gaaatccgaa atct                                              24


<210>  23
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 3'  (G) BAC clone RP11-347G11, forward

<400>  23
gaacagcatg ggtggctatg acta                                              24


<210>  24
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer, RET 3'  (G) BAC clone RP11-347G11, reverse

<400>  24
tcagggagct agcacctttg agtt                                              24


