                         SEQUENCE LISTING

<110>  Calvert, Jay Gregory
       Ankenbauer, Robert G.
       Marx, Jacqueline Gayle
       Pearce, Douglas S.
       Keith, Marcia L.
 
<120>  EFFECTIVE VACCINATION AGAINST PORCINE REPRODUCTIVE AND RESPIRATORY 
       SYNDROME (PRRS) VIRUS PRIOR TO WEANING

<130>  PC71939A

<150>  61/648,461
<151>  2012-05-17

<160>  57    

<170>  PatentIn version 3.5

<210>  1
<211>  15450
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  P129-PK-FL passage 17 complete genome (15,450 nt) full length 
       infectious clone

<400>  1
atgacgtata ggtgttggct ctatgccacg gcatttgtat tgtcaggagc tgtgaccatt       60

ggcacagccc aaaacttgct gcacggaaaa cgcccttctg tgacagcctt cttcagggga      120

gcttaggggt ctgtccctag caccttgctt ctggagttgc actgctttac ggtctctcca      180

cccctttaac catgtctggg atacttgatc ggtgcacgtg cacccccaat gccagggtgt      240

ttatggcgga gggccaagtc tactgcacac gatgtctcag tgcacggtct ctccttcctc      300

tgaatctcca agttcctgag cttggggtgc tgggcctatt ttataggccc gaagagccac      360

tccggtggac gttgccacgt gcattcccca ctgtcgagtg ctcccctgcc ggggcctgct      420

ggctttctgc gatctttcca attgcacgaa tgaccagtgg aaacctgaac tttcaacaaa      480

gaatggtgcg ggttgcagct gagatttaca gagccggcca actcacccct gcagttttga      540

aggctctaca agtttatgaa cggggttgtc gctggtaccc cattgtcgga cctgtccctg      600

gagtggccgt ttacgccaac tccctacatg tgagtgacaa acctttcccg ggagcaactc      660

atgtgttaac caacctaccg ctcccgcaga ggcccaagcc tgaagacttt tgcccttttg      720

agtgtgctat ggctaacgtc tatgacattg gccataacgc cgtcatgtat gtggccagag      780

ggaaagtctc ctgggcccct cgtggcgggg atgaagtgaa atttgaaacc gtccccgaag      840

agttgaagtt gattgcgaac cgactccaca tctccttccc gccccaccac gcagtggaca      900

tgtctgagtt tgccttcata gcccctggga gtggtgtctc cttgcgggtc gagcaccaac      960

acggctgcct tcccgctgat actgtccctg atgggaactg ctggtggtac ttgtttgact     1020

tgctcccacc ggaagttcag aataaagaaa ttcgccgtgc taaccaattt ggctatcaaa     1080

ccaagcatgg tgtccatggc aagtacctac agcggaggct gcaagttaat ggtctccgag     1140

cagtgactga tacagatgga cctattgtcg tacagtactt ctctgttagg gagagttgga     1200

tccgccactt cagattggcg gaagaaccta gcctccctgg gtttgaagac ctcctcagaa     1260

taagggtaga gcctaatacg tcgccattgg gtggcaaggg tgaaaaaatc ttccggtttg     1320

gcagtcacaa gtggtacggt gctggaaaga gagcaaggag agcacgctct ggtgcgactg     1380

ccacggtcgc tcaccgcgct ttgcccgctc gcgaagccca gcaggccaag aagctcgagg     1440

ttgccagcgc caacagggct gagcatctca agtactattc cccgcctgcc gacgggaact     1500

gtggttggca ctgcatttcc gccattacca accggatggt gaattccaaa tttgaaacca     1560

ctcttcccga gagagtgaga ccttcagatg actgggctac tgacgaggat cttgtgaata     1620

ccatccaaat cctcaggctc cccgcggcct tggacaggaa cggtgcttgt gctggcgcca     1680

agtacgtgct caagctggaa ggtgagcact ggaccgtctc tgtgacccct gggatgaccc     1740

cttctttgct cccccttgaa tgtgttcagg gttgttgtga gcataagagc ggtcttggtt     1800

tcccagacgt ggtcgaagtt tccggatttg accctgcctg tcttgaccga cttgctgaga     1860

taatgcactt gcctagcagt gtcatcccag ctgctctggc cgagatgtcc gacgacttca     1920

atcgtctggc ttccccggcc gccactgtgt ggactgtttc gcaattcttt gcccgccaca     1980

gaggaggaga gcatcctgac caggtgtgct tagggaaaat tatcaacctt tgtcaggtga     2040

ttgaggaatg ctgctgttcc cggaacaaag ccaaccgggc taccccggaa gaggttgcgg     2100

caaaagttga ccagtacctc cgtggtgcag caagccttgg agaatgcttg gccaagcttg     2160

agagggctcg cccgccgagc gcgacggaca cctcctttga ttggaatgtt gtgcttcctg     2220

gggttgagac ggcgaatcag acaaccaaac agctccatgt caaccagtgc cgcgctctgg     2280

ttcctgtcgt gactcaagag cctttggaca gagactcggt ccctctgacc gccttctcgc     2340

tgtccaattg ctactaccct gcacaaggtg acgaggtccg tcaccgtgag aggctaaact     2400

ccttgctctc taagttggag ggggttgttc gtgaggaata tgggctcacg ccaactggac     2460

ctggcccgcg acccgcactg ccgaacgggc tcgacgagct taaagaccag atggaggagg     2520

atctgctgaa attagtcaac gcccaggcaa cttcagaaat gatggcctgg gcagccgagc     2580

aggttgatct aaaagcttgg gtcaaaaatt acccacggtg gacaccgcca ccccctccac     2640

caagagttca gcctcgaaaa acgaagtctg tcaagagctt gctagagaac aagcctgtcc     2700

ctgctccgcg caggaaggtc agatctgatt gtggcagccc gattttgatg ggcgacaatg     2760

ttcctaacgg ttgggaagat tcgactgttg gtggtcccct tgatctttcg gcaccatccg     2820

agccgatgac acctctgagt gagcctgtac ttatttccag gccagtgaca tctttgagtg     2880

tgccggcccc agttcctgca ccgcgtagag ctgtgtcccg accgatgacg ccctcgagtg     2940

agccaatttt tgtgtctgca ctgcgacaca aatttcagca ggtggaaaaa gcaaatctgg     3000

cggcagcagc gccgatgtgc caggacgaac ccttagattt gtctgcatcc tcacagactg     3060

aatatgaggc ttccccccta acaccaccgc agaacgtggg cattctggag gtaagggggc     3120

aagaagctga ggaagttctg agtgaaatct cggatattct gaatgatacc aaccctgcac     3180

ctgtgtcatc aagcagctcc ctgtcaagtg ttaagatcac acgcccaaaa tactcagctc     3240

aagccattat cgactcgggc gggccctgca gtgggcacct ccaaagggaa aaagaagcat     3300

gcctccgcat catgcgtgag gcttgtgatg cggccaagct tagtgaccct gccacgcagg     3360

aatggctttc tcgcatgtgg gatagggtgg acatgctgac ttggcgcaac acgtctgctt     3420

accaggcgtt tcgcacctta gatggcaggt ttgggtttct cccaaagatg atactcgaga     3480

cgccgccgcc ctacccgtgt gggtttgtga tgttgcctca cacccctgca ccttccgtga     3540

gtgcagagag cgaccttacc attggttcag tcgccactga agatattcca cgcatcctcg     3600

ggaaaataga aaataccggt gagatgatca accagggacc cttggcatcc tctgaggaag     3660

aaccggtata caaccaacct gccaaagact cccggatatc gtcgcggggg tctgacgaga     3720

gcacagcagc tccgtccgcg ggtacaggtg gcgccggctt atttactgat ttgccacctt     3780

cagacggcgt agatgcggac ggtggggggc cgttgcagac ggtaagaaag aaagctgaaa     3840

ggctcttcga ccaattgagc cgtcaggttt ttaacctcgt ctcccatctc cctgttttct     3900

tctcacacct cttcaaatct gacagtggtt attctccggg tgattggggt tttgcagctt     3960

ttactctatt ttgcctcttt ttgtgttaca gctacccatt cttcggtttc gttcccctct     4020

tgggtgtatt ttctgggtct tctcggcgtg tgcgcatggg ggtttttggc tgctggctgg     4080

cttttgctgt tggcctgttc aagcctgtgt ccgacccagt cggcactgct tgtgagtttg     4140

actcgccaga gtgcaggaac gtccttcatt cttttgagct tctcaaacct tgggaccctg     4200

ttcgcagcct tgttgtgggc cccgtcggtc tcggtcttgc cattcttggc aggttactgg     4260

gcggggcacg ctacatctgg cattttttgc ttaggcttgg cattgttgca gattgtatct     4320

tggctggagc ttatgtgctt tctcaaggta ggtgtaaaaa gtgctgggga tcttgtataa     4380

gaactgctcc taatgaaatc gccttcaacg tgttcccttt tacacgtgcg accaggtcgt     4440

cactcatcga cctgtgcgat cggttttgtg cgccaacagg catggacccc attttcctcg     4500

ccactgggtg gcgtgggtgc tggaccggcc gaagtcccat tgagcaaccc tctgaaaaac     4560

ccatcgcgtt cgcccagttg gatgaaaaga ggattacggc tagaactgtg gtcgctcagc     4620

cttatgatcc taatcaagcc gtgaagtgct tgcgggtgtt acaggcgggt ggggcgatgg     4680

tggccgaggc agtcccaaaa gtggccaaag tttctgctat tccattccga gccccttttt     4740

ttcccaccgg agtgaaagtt gatcccgagt gcaggatcgt ggttgacccc gatactttta     4800

ctacagccct ccggtctggt tactctacca caaacctcgt ccttggtgtg ggggactttg     4860

cccagctgaa tggactaaag atcaggcaaa tttccaagcc ttcgggagga ggcccacacc     4920

tcattgctgc cctgcatgtt gcctgctcga tggcgttgca catgcttgct ggggtttatg     4980

taacttcagt ggggtcttgc ggtgccggca ccaacgatcc atggtgcact aatccgtttg     5040

ccgttcctgg ctacggacca ggctctctct gcacgtccag attgtgcatc tcccaacatg     5100

gccttaccct gcccttgaca gcacttgtgg cgggattcgg tcttcaggaa atcgccttgg     5160

tcgttttgat tttcgtttcc atcggaggca tggctcatag gttgagttgt aaggctgata     5220

tgctgtgcat tttacttgca atcgccagct atgtttgggt accccttacc tggttgcttt     5280

gtgtgtttcc ttgttggttg cgctggttct ctttgcaccc ccttaccatc ctatggttgg     5340

tgtttttctt gatttctgta aatatgcctt cgggaatctt ggccgtggtg ttattggttt     5400

ctctttggct tttgggacgt tatactaaca ttgctggtct tgtcaccccc tatgatattc     5460

atcattacac cagtggcccc cgcggtgttg ccgccttggc taccgcacca gatggaacct     5520

acttggctgc cgtccgccgc gctgcgttga ctggtcgcac catgctgttc accccgtctc     5580

agcttgggtc ccttcttgag ggcgctttca gaactcgaaa gccctcactg aacaccgtca     5640

atgtggttgg gtcctccatg ggctctggtg gagtgttcac catcgacggg aaaattaggt     5700

gcgtgactgc cgcacatgtc cttacgggta attcggctag ggtttccgga gtcggcttca     5760

atcaaatgct tgactttgat gtgaaagggg acttcgccat agctgattgc ccgaattggc     5820

aaggagctgc tcccaagacc caattctgcg aggacggatg gactggccgt gcctattggc     5880

tgacatcctc tggcgtcgaa cccggtgtta ttgggaatgg attcgccttc tgcttcaccg     5940

cgtgcggcga ttccgggtcc ccagtgatca ccgaagctgg tgagattgtc ggcgttcaca     6000

caggatcaaa taaacaagga ggtggcatcg tcacgcgccc ttcaggccag ttttgtaacg     6060

tggcacccat caagctgagc gaattaagtg aattctttgc tggacccaag gtcccgctcg     6120

gtgatgtgaa ggttggcagc cacataatta aagacacgtg cgaagtacct tcagatcttt     6180

gcgccttgct tgctgccaaa cctgaactgg agggaggcct ctccaccgtc caacttctgt     6240

gtgtgttttt cctactgtgg agaatgatgg gacatgcctg gacgcccttg gttgctgtgg     6300

ggtttttcat tctgaatgag gttctcccag ctgtcctggt tcggagtgtt ttctcctttg     6360

ggatgtttgt gctatcttgg ctcacaccat ggtctgcgca agttctgatg atcaggcttc     6420

taacagcagc tcttaacagg aacagatggt cacttgcctt ttacagcctt ggtgcggtga     6480

ccggttttgt cgcagatctt gcggtaactc aagggcaccc gttgcaggca gtaatgaatt     6540

tgagcaccta tgccttcctg cctcggatga tggttgtgac ctcaccagtc ccagtgattg     6600

cgtgtggtgt tgtgcaccta cttgccatca ttttgtactt gttcaagtac cgcggcctgc     6660

acaatgttct tgttggtgat ggagcgtttt ctgcagcttt cttcttgcga tactttgccg     6720

agggaaagtt gagggaaggg gtgtcgcaat cctgcggaat gaatcatgag tcattgactg     6780

gtgccctcgc tatgagactc aatgacgagg acttggactt ccttacgaaa tggactgatt     6840

ttaagtgctt tgtttctgcg tccaacatga ggaatgcagc aggccaattc atcgaggctg     6900

cctatgcaaa agcacttaga attgaacttg cccagttggt gcaggttgat aaggttcgag     6960

gtactttggc caagcttgag gcttttgctg ataccgtggc accccaactc tcgcccggtg     7020

acattgttgt tgctcttggc catacgcctg ttggcagcat cttcgaccta aaggttggtg     7080

gtaccaagca tactctccaa gtcattgaga ccagagtcct tgccgggtcc aaaatgaccg     7140

tggcgcgcgt cgttgaccca acccccacgc ccccacccgc acccgtgccc atccccctcc     7200

caccgaaagt tctagagaat ggtcccaacg cctgggggga tggggaccgt ttgaataaga     7260

agaagaggcg taggatggaa accgtcggca tctttgtcat gggtgggaag aagtaccaga     7320

aattttggga caagaattcc ggtgatgtgt tttacgagga ggtccatgac aacacagatg     7380

cgtgggagtg cctcagagtt ggtgaccctg ccgactttaa ccctgagaag ggaactctgt     7440

gtgggcatac tactattgaa gataaggatt acaaagtcta cgcctcccca tctggcaaga     7500

agttcctggt ccccgtcaac ccagagagcg gaagagccca atgggaagct gcaaagcttt     7560

ccgtggagca ggcccttggc atgatgaatg tcgacggtga actgacggcc aaagaagtgg     7620

agaaactgaa aagaataatt gacaaacttc agggcctgac taaggagcag tgtttaaact     7680

gctagccgcc agcggcttga cccgctgtgg tcgcggcggc ttggttgtta ctgagacagc     7740

ggtaaaaata gtcaaatttc acaaccggac tttcacccta gggcctgtga atttaaaagt     7800

ggccagtgag gttgagctga aagacgcggt cgagcacaac caacacccgg ttgcaagacc     7860

ggttgacggt ggtgttgtgc tcctgcgttc cgcagttcct tcgcttatag atgtcctgat     7920

ctccggtgct gacgcatctc ctaagttact cgctcgtcac gggccgggga acactgggat     7980

cgatggcacg ctttgggact ttgaggccga ggccaccaaa gaggaaattg cgctcagtgc     8040

gcaaataata caggcttgtg acattaggcg cggtgacgca cctgaaattg gtctccctta     8100

caagctgtac cctgttaggg gcaaccctga gcgggtaaaa ggagttttac agaatacaag     8160

gtttggagac ataccttaca aaacccccag tgacactggg agcccagtgc acgcggctgc     8220

ctgcctcacg cccaatgcca ctccggtgac tgatgggcgc tccgtcttgg ctactaccat     8280

gccctccggt tttgaattgt atgtaccgac cattccagcg tctgtccttg attatcttga     8340

ctctaggcct gactgcccca aacagttgac agagcacggc tgtgaggatg ccgcattgag     8400

agacctctcc aagtatgact tgtccaccca aggctttgtt ttacctgggg ttcttcgcct     8460

tgtgcgtaag tacctgtttg cccacgtggg taagtgcccg cccgttcatc ggccttccac     8520

ttaccctgcc aagaattcta tggctggaat aaatgggaac aggtttccaa ccaaggacat     8580

tcagagcgtc cccgaaatcg acgttctgtg cgcacaggcc gtgcgagaaa actggcaaac     8640

tgttacccct tgtaccctca agaaacagta ttgtgggaag aagaagacta ggacaatact     8700

cggcaccaat aatttcattg cgttggccca ccgggcagcg ttgagtggtg tcacccaggg     8760

cttcatgaaa aaggcgttta actcgcccat cgccctcggg aaaaacaaat ttaaggagct     8820

acagactccg atcttaggca ggtgccttga agctgatctt gcatcctgtg atcgatccac     8880

acctgcaatt gtccgctggt ttgccgccaa ccttctttat gaacttgcct gtgctgaaga     8940

gcacctaccg tcgtacgtgc tgaactgctg ccatgaccta ttggtcacgc agtccggcgc     9000

agtgactaag aggggtggcc tgtcgtctgg cgacccgatc acttctgtgt ctaacaccat     9060

ttacagcttg gtgatatatg cacagcacat ggtgcttagt tactttaaaa gtggtcaccc     9120

tcatggcctt ctgttcctac aagaccagct gaagttcgag gacatgctca aagtccaacc     9180

cctgatcgtc tattcggacg acctcgtgct gtatgccgaa tctcccacca tgccgaacta     9240

ccactggtgg gtcgaacatc tgaatttgat gctgggtttt cagacggacc caaagaagac     9300

agccataacg gactcgccat catttctagg ctgtaggata ataaatggac gccagctagt     9360

ccccaaccgt gacaggatcc tcgcggccct cgcttaccat atgaaggcaa gcaatgtttc     9420

tgaatactac gccgcggcgg ctgcaatact catggacagc tgtgcttgtt tagagtatga     9480

tcctgaatgg tttgaagagc ttgtggttgg gatagcgcag tgcgcccgca aggacggcta     9540

cagctttccc ggcccgccgt tcttcttgtc catgtgggaa aaactcagat ccaatcatga     9600

ggggaagaag tccagaatgt gcgggtattg cggggccccg gctccgtacg ccactgcctg     9660

tggcctcgac gtctgtattt accacaccca cttccaccag cattgtccag tcacaatctg     9720

gtgtggccac ccggctggtt ctggttcttg tagtgagtgc aaaccccccc tagggaaagg     9780

cacaagccct ctagatgagg tgttagaaca agtcccgtat aagcctccac ggactgtaat     9840

catgcatgtg gagcagggtc tcacccctct tgacccaggc agataccaga ctcgccgcgg     9900

attagtctcc gttaggcgtg gcatcagagg aaatgaagtt gacctaccag acggtgatta     9960

tgctagcacc gccctactcc ccacttgtaa agagatcaac atggtcgctg tcgcctctaa    10020

tgtgttgcgc agcaggttca tcatcggtcc gcccggtgct gggaaaacat actggctcct    10080

tcagcaggtc caggatggtg atgtcattta cacaccgact caccagacca tgctcgacat    10140

gattagggct ttggggacgt gccggttcaa cgtcccagca ggtacaacgc tgcaattccc    10200

tgccccctcc cgtaccggcc cgtgggttcg catcctagcc ggcggttggt gtcctggtaa    10260

gaattccttc ttggatgaag cagcgtattg taatcacctt gatgtcttga ggctccttag    10320

caaaaccacc ctcacctgtc tgggagactt caaacaactc cacccagtgg gttttgattc    10380

tcattgctat gtttttgaca tcatgcctca gacccagttg aagaccatct ggagattcgg    10440

acagaacatc tgtgatgcca tccaaccaga ttacagggac aaacttgtgt ccatggtcaa    10500

cacaacccgt gtaacctacg tggaaaaacc tgtcaagtat gggcaagtcc tcacccctta    10560

ccacagggac cgagaggacg gcgccatcac aattgactcc agtcaaggcg ccacatttga    10620

tgtggtcaca ctgcatttgc ccactaaaga ttcactcaac aggcaaagag cccttgttgc    10680

tatcaccagg gcaagacatg ctatctttgt gtatgaccca cacaggcaat tgcagagcat    10740

gtttgatctt cctgcgaagg gcacacccgt caacctcgca gtgcaccgtg atgagcagct    10800

gatcgtactg gatagaaata ataaagaatg cacagttgct caggctctag gcaacggaga    10860

taaatttagg gccaccgaca agcgcgttgt agattctctc cgcgccattt gtgctgatct    10920

ggaagggtcg agctctccgc tccccaaggt cgcacacaac ttgggatttt atttctcacc    10980

tgatttgaca cagtttgcta aactcccggt agaccttgca ccccactggc ccgtggtgac    11040

aacccagaac aatgaaaagt ggccggatcg gctggttgcc agccttcgcc ctgtccataa    11100

gtatagccgt gcgtgcattg gtgccggcta tatggtgggc ccctcggtgt ttctaggcac    11160

ccctggggtc gtgtcatact acctcacaaa atttgtcaag ggcgaggctc aagtgcttcc    11220

ggagacagtc ttcagcaccg gccgaattga ggtggattgc cgggagtatc ttgatgacag    11280

ggagcgagaa gttgctgagt ccctcccaca tgccttcatt ggcgacgtca aaggcaccac    11340

cgttggggga tgtcatcatg tcacctccaa ataccttccg cgcttccttc ccaaggaatc    11400

agtcgcggta gtcggggttt cgagccccgg gaaagccgca aaagcagtgt gcacattgac    11460

ggatgtgtac ctcccagacc ttgaggccta cctccaccca gagactcagt ccaagtgctg    11520

gaaagttatg ttggacttca aggaagttcg actgatggtc tggaaagaca agacggccta    11580

tttccaactt gaaggccgct atttcacctg gtatcagctt gcaagctacg cctcgtacat    11640

ccgtgttcct gtcaactcca cggtgtatct ggacccctgc atgggccctg ccctttgcaa    11700

cagaagagtt gtcgggtcca cccattgggg agctgacctc gcagtcaccc cttatgatta    11760

cggtgctaaa atcatcttgt ctagcgctta ccatggtgaa atgcctcctg gatacaagat    11820

tctggcgtgc gcggagttct cgctcgacga cccagtcaag tacaaacaca cctggggttt    11880

tgaatcggat acagcgtatc tgtatgagtt caccggaaac ggtgaggact gggaggatta    11940

caatgatgcg tttcgtgcgc gccagaaagg gaaaatttat aaggccactg ctaccagcat    12000

gaagttttat tttcccccgg gccccgtcat tgaaccaact ttaggcctga attgaaatga    12060

aatggggtct atacaaagcc tcttcgacaa aattggccag ctttttgtgg atgctttcac    12120

ggaatttttg gtgtccattg ttgatatcat catatttttg gccattttgt ttggcttcac    12180

catcgccggt tggctggtgg tcttttgcat cagattggtt tgctccgcgg tattccgtgc    12240

gcgccctgcc attcaccctg agcaattaca gaagatccta tgaggccttt ctttctcagt    12300

gccgggtgga cattcccacc tggggggtaa aacacccttt ggggatgttt tggcaccata    12360

aggtgtcaac cctgattgat gaaatggtgt cgcgtcgaat gtaccgcatc atggaaaaag    12420

cagggcaagc tgcctggaaa caggtggtga gcgaggctac gctgtctcgc attagtagtt    12480

tggatgtggt ggctcatttt caacatcttg ccgccattga agccgagacc tgtaaatatt    12540

tggcttctcg actgcccatg ctacacaacc tgcgcatgac agggtcaaat gtaaccatag    12600

tgtataatag cactttaaat caggtgtttg ctatttttcc aacccctggt tcccggccaa    12660

agcttcatga ttttcagcaa tggctaatag ctgtacattc ctccatattt tcctctgttg    12720

cagcttcttg tactcttttt gttgtgctgt ggttgcgggt tccaatgcta cgtactgttt    12780

ttggtttccg ctggttaggg gcaatttttc tttcgaactc atggtgaatt acacggtgtg    12840

tccaccttgc ctcacccgac aagcagccgc tgaggtcctt gaacccggta ggtctctttg    12900

gtgcaggata gggcatgacc gatgtgggga ggacgatcac gacgaactgg ggttcatggt    12960

tccgcctggc ctctccagcg aaagccactt gaccagtgtt tacgcctggt tggcgttcct    13020

gtccttcagc tacacggccc agttccatcc cgagatattt gggataggga acgtgagtga    13080

agtttatgtt gacatcaagc accaattcat ctgcgccgtt catgacgggc agaacaccac    13140

cttgcctcgc catgacaata tttcagccgt atttcagacc tactatcaac atcaggtcga    13200

cggcggcaat tggtttcacc tagaatggct gcgtcccttc ttttcctctt ggttggtttt    13260

aaatgtttcg tggtttctca ggcgttcgcc tgcaagccat gtttcagttc gagtctttca    13320

gacatcaaaa ccaacactac cgcagcatca ggctttgttg tcctccagga catcagctgc    13380

cttaggcatg gcgactcgtc ctttccgacg attcgcaaaa gctctcaatg ccgcacggcg    13440

atagggacac ctgtgtatat caccatcaca gccaatgtga cagatgagaa ttacttacat    13500

tcttctgatc tcctcatgct ttcttcttgc cttttctatg cttctgagat gagtgaaaag    13560

ggattcaagg tggtatttgg caatgtgtca ggcatcgtgg ctgtgtgtgt caactttacc    13620

agctacgtcc aacatgtcaa agagtttacc caacgctcct tggtggtcga tcatgtgcgg    13680

ctgcttcatt tcatgacacc tgagaccatg aggtgggcaa ccgttttagc ctgtcttttt    13740

gccatcctac tggcaatttg aatgttcaag tatgttgggg aaatgcttga ccgcgggctg    13800

ttgctcgcga ttgctttctt tgtggtgtat cgtgccgttc tggtttgctg tgctcggcaa    13860

cgccaacagc agcagcagct ctcattttca gttgatttat aacttgacgc tatgtgagct    13920

gaatggcaca gattggctgg cagaaaaatt tgattgggca gtggagactt ttgtcatctt    13980

tcccgtgttg actcacattg tttcctatgg tgcactcacc accagccatt tccttgacac    14040

agttggtctg gttactgtgt ccaccgccgg gttttatcac gggcggtatg tcttgagtag    14100

catctacgcg gtctgtgctc tggctgcgtt gatttgcttc gttattaggc ttgcgaagaa    14160

ctgcatgtcc tggcgctact cttgtaccag atataccaac ttccttctgg acactaaggg    14220

cagactctat cgttggcggt cgcccgttat catagaaaaa gggggtaagg ttgaggtcga    14280

aggtcatctg atcgacctca aaagagttgt gcttgatggt tccgtggcaa cccctttaac    14340

cagagtttca gcggaacaat ggggtcgtct ctagacgact tttgccatga tagcacggct    14400

ccacaaaagg tgcttttggc gttttccatt acctacacgc cagtaatgat atatgctcta    14460

aaggtaagtc gcggccgact gctagggctt ctgcaccttt tgatctttct gaattgtgct    14520

tttaccttcg ggtacatgac attcgcgcac tttcagagca caaatagggt cgcgctcgct    14580

atgggagcag tagttgcact tctttggggg gtgtactcag ccatagaaac ctggaaattc    14640

atcacctcca gatgccgttt gtgcttgcta ggccgcaagt acattctggc ccctgcccac    14700

cacgtcgaaa gtgccgcggg ctttcatccg attgcggcaa atgataacca cgcatttgtc    14760

gtccggcgtc ccggctccat tacggttaac ggcacattgg tgcccgggtt gaaaagcctc    14820

gtgttgggtg gcagaaaagc tgttaaacag ggagtggtaa accttgtcaa atatgccaaa    14880

taacaacggc aagcagcaaa agaaaaagaa ggggaatggc cagccagtca accagctgtg    14940

ccagatgctg ggtaaaatca tcgcccagca aaaccagtcc agaggcaagg gaccgggcaa    15000

gaaaagtaag aagaaaaacc cggagaagcc ccattttcct ctagcgaccg aagatgacgt    15060

caggcatcac ttcacccctg gtgagcggca attgtgtctg tcgtcgatcc agactgcctt    15120

taaccagggc gctggaactt gtaccctgtc agattcaggg aggataagtt acactgtgga    15180

gtttagtttg ccgacgcatc atactgtgcg cctgatccgc gtcacagcat caccctcagc    15240

atgatgggct ggcattcttt aggcacctca gtgtcagaat tggaagaatg tgtggtggat    15300

ggcactgatt gacattgtgc ctctaagtca cctattcaat tagggcgacc gtgtgggggt    15360

aaaatttaat tggcgagaac catgcggccg caattaaaaa aaaaaaaaaa aaaaaaaaaa    15420

aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa                                     15450


<210>  2
<211>  15444
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  P129-PK-d43/44 passage 17 complete genome (15,444 nt) 2 aa 
       deleted infectious clone

<400>  2
atgacgtata ggtgttggct ctatgccacg gcatttgtat tgtcaggagc tgtgaccatt       60

ggcacagccc aaaacttgct gcacggaaaa cgcccttctg tgacagcctt cttcagggga      120

gcttaggggt ctgtccctag caccttgctt ctggagttgc actgctttac ggtctctcca      180

cccctttaac catgtctggg atacttgatc ggtgcacgtg cacccccaat gccagggtgt      240

ttatggcgga gggccaagtc tactgcacac gatgtctcag tgcacggtct ctccttcctc      300

tgaatctcca agttcctgag cttggggtgc tgggcctatt ttataggccc gaagagccac      360

tccggtggac gttgccacgt gcattcccca ctgtcgagtg ctcccctgcc ggggcctgct      420

ggctttctgc gatctttcca attgcacgaa tgaccagtgg aaacctgaac tttcaacaaa      480

gaatggtgcg ggttgcagct gagatttaca gagccggcca actcacccct gcagttttga      540

aggctctaca agtttatgaa cggggttgtc gctggtaccc cattgtcgga cctgtccctg      600

gagtggccgt ttacgccaac tccctacatg tgagtgacaa acctttcccg ggagcaactc      660

atgtgttaac caacctaccg ctcccgcaga ggcccaagcc tgaagacttt tgcccttttg      720

agtgtgctat ggctaacgtc tatgacattg gccataacgc cgtcatgtat gtggccagag      780

ggaaagtctc ctgggcccct cgtggcgggg atgaagtgaa atttgaaacc gtccccgaag      840

agttgaagtt gattgcgaac cgactccaca tctccttccc gccccaccac gcagtggaca      900

tgtctgagtt tgccttcata gcccctggga gtggtgtctc cttgcgggtc gagcaccaac      960

acggctgcct tcccgctgat actgtccctg atgggaactg ctggtggtac ttgtttgact     1020

tgctcccacc ggaagttcag aataaagaaa ttcgccgtgc taaccaattt ggctatcaaa     1080

ccaagcatgg tgtccatggc aagtacctac agcggaggct gcaagttaat ggtctccgag     1140

cagtgactga tacagatgga cctattgtcg tacagtactt ctctgttagg gagagttgga     1200

tccgccactt cagattggcg gaagaaccta gcctccctgg gtttgaagac ctcctcagaa     1260

taagggtaga gcctaatacg tcgccattgg gtggcaaggg tgaaaaaatc ttccggtttg     1320

gcagtcacaa gtggtacggt gctggaaaga gagcaaggag agcacgctct ggtgcgactg     1380

ccacggtcgc tcaccgcgct ttgcccgctc gcgaagccca gcaggccaag aagctcgagg     1440

ttgccagcgc caacagggct gagcatctca agtactattc cccgcctgcc gacgggaact     1500

gtggttggca ctgcatttcc gccattacca accggatggt gaattccaaa tttgaaacca     1560

ctcttcccga gagagtgaga ccttcagatg actgggctac tgacgaggat cttgtgaata     1620

ccatccaaat cctcaggctc cccgcggcct tggacaggaa cggtgcttgt gctggcgcca     1680

agtacgtgct caagctggaa ggtgagcact ggaccgtctc tgtgacccct gggatgaccc     1740

cttctttgct cccccttgaa tgtgttcagg gttgttgtga gcataagagc ggtcttggtt     1800

tcccagacgt ggtcgaagtt tccggatttg accctgcctg tcttgaccga cttgctgaga     1860

taatgcactt gcctagcagt gtcatcccag ctgctctggc cgagatgtcc gacgacttca     1920

atcgtctggc ttccccggcc gccactgtgt ggactgtttc gcaattcttt gcccgccaca     1980

gaggaggaga gcatcctgac caggtgtgct tagggaaaat tatcaacctt tgtcaggtga     2040

ttgaggaatg ctgctgttcc cggaacaaag ccaaccgggc taccccggaa gaggttgcgg     2100

caaaagttga ccagtacctc cgtggtgcag caagccttgg agaatgcttg gccaagcttg     2160

agagggctcg cccgccgagc gcgacggaca cctcctttga ttggaatgtt gtgcttcctg     2220

gggttgagac ggcgaatcag acaaccaaac agctccatgt caaccagtgc cgcgctctgg     2280

ttcctgtcgt gactcaagag cctttggaca gagactcggt ccctctgacc gccttctcgc     2340

tgtccaattg ctactaccct gcacaaggtg acgaggtccg tcaccgtgag aggctaaact     2400

ccttgctctc taagttggag ggggttgttc gtgaggaata tgggctcacg ccaactggac     2460

ctggcccgcg acccgcactg ccgaacgggc tcgacgagct taaagaccag atggaggagg     2520

atctgctgaa attagtcaac gcccaggcaa cttcagaaat gatggcctgg gcagccgagc     2580

aggttgatct aaaagcttgg gtcaaaaatt acccacggtg gacaccgcca ccccctccac     2640

caagagttca gcctcgaaaa acgaagtctg tcaagagctt gctagagaac aagcctgtcc     2700

ctgctccgcg caggaaggtc agatctgatt gtggcagccc gattttgatg ggcgacaatg     2760

ttcctaacgg ttgggaagat tcgactgttg gtggtcccct tgatctttcg gcaccatccg     2820

agccgatgac acctctgagt gagcctgtac ttatttccag gccagtgaca tctttgagtg     2880

tgccggcccc agttcctgca ccgcgtagag ctgtgtcccg accgatgacg ccctcgagtg     2940

agccaatttt tgtgtctgca ctgcgacaca aatttcagca ggtggaaaaa gcaaatctgg     3000

cggcagcagc gccgatgtgc caggacgaac ccttagattt gtctgcatcc tcacagactg     3060

aatatgaggc ttccccccta acaccaccgc agaacgtggg cattctggag gtaagggggc     3120

aagaagctga ggaagttctg agtgaaatct cggatattct gaatgatacc aaccctgcac     3180

ctgtgtcatc aagcagctcc ctgtcaagtg ttaagatcac acgcccaaaa tactcagctc     3240

aagccattat cgactcgggc gggccctgca gtgggcacct ccaaagggaa aaagaagcat     3300

gcctccgcat catgcgtgag gcttgtgatg cggccaagct tagtgaccct gccacgcagg     3360

aatggctttc tcgcatgtgg gatagggtgg acatgctgac ttggcgcaac acgtctgctt     3420

accaggcgtt tcgcacctta gatggcaggt ttgggtttct cccaaagatg atactcgaga     3480

cgccgccgcc ctacccgtgt gggtttgtga tgttgcctca cacccctgca ccttccgtga     3540

gtgcagagag cgaccttacc attggttcag tcgccactga agatattcca cgcatcctcg     3600

ggaaaataga aaataccggt gagatgatca accagggacc cttggcatcc tctgaggaag     3660

aaccggtata caaccaacct gccaaagact cccggatatc gtcgcggggg tctgacgaga     3720

gcacagcagc tccgtccgcg ggtacaggtg gcgccggctt atttactgat ttgccacctt     3780

cagacggcgt agatgcggac ggtggggggc cgttgcagac ggtaagaaag aaagctgaaa     3840

ggctcttcga ccaattgagc cgtcaggttt ttaacctcgt ctcccatctc cctgttttct     3900

tctcacacct cttcaaatct gacagtggtt attctccggg tgattggggt tttgcagctt     3960

ttactctatt ttgcctcttt ttgtgttaca gctacccatt cttcggtttc gttcccctct     4020

tgggtgtatt ttctgggtct tctcggcgtg tgcgcatggg ggtttttggc tgctggctgg     4080

cttttgctgt tggcctgttc aagcctgtgt ccgacccagt cggcactgct tgtgagtttg     4140

actcgccaga gtgcaggaac gtccttcatt cttttgagct tctcaaacct tgggaccctg     4200

ttcgcagcct tgttgtgggc cccgtcggtc tcggtcttgc cattcttggc aggttactgg     4260

gcggggcacg ctacatctgg cattttttgc ttaggcttgg cattgttgca gattgtatct     4320

tggctggagc ttatgtgctt tctcaaggta ggtgtaaaaa gtgctgggga tcttgtataa     4380

gaactgctcc taatgaaatc gccttcaacg tgttcccttt tacacgtgcg accaggtcgt     4440

cactcatcga cctgtgcgat cggttttgtg cgccaacagg catggacccc attttcctcg     4500

ccactgggtg gcgtgggtgc tggaccggcc gaagtcccat tgagcaaccc tctgaaaaac     4560

ccatcgcgtt cgcccagttg gatgaaaaga ggattacggc tagaactgtg gtcgctcagc     4620

cttatgatcc taatcaagcc gtgaagtgct tgcgggtgtt acaggcgggt ggggcgatgg     4680

tggccgaggc agtcccaaaa gtggccaaag tttctgctat tccattccga gccccttttt     4740

ttcccaccgg agtgaaagtt gatcccgagt gcaggatcgt ggttgacccc gatactttta     4800

ctacagccct ccggtctggt tactctacca caaacctcgt ccttggtgtg ggggactttg     4860

cccagctgaa tggactaaag atcaggcaaa tttccaagcc ttcgggagga ggcccacacc     4920

tcattgctgc cctgcatgtt gcctgctcga tggcgttgca catgcttgct ggggtttatg     4980

taacttcagt ggggtcttgc ggtgccggca ccaacgatcc atggtgcact aatccgtttg     5040

ccgttcctgg ctacggacca ggctctctct gcacgtccag attgtgcatc tcccaacatg     5100

gccttaccct gcccttgaca gcacttgtgg cgggattcgg tcttcaggaa atcgccttgg     5160

tcgttttgat tttcgtttcc atcggaggca tggctcatag gttgagttgt aaggctgata     5220

tgctgtgcat tttacttgca atcgccagct atgtttgggt accccttacc tggttgcttt     5280

gtgtgtttcc ttgttggttg cgctggttct ctttgcaccc ccttaccatc ctatggttgg     5340

tgtttttctt gatttctgta aatatgcctt cgggaatctt ggccgtggtg ttattggttt     5400

ctctttggct tttgggacgt tatactaaca ttgctggtct tgtcaccccc tatgatattc     5460

atcattacac cagtggcccc cgcggtgttg ccgccttggc taccgcacca gatggaacct     5520

acttggctgc cgtccgccgc gctgcgttga ctggtcgcac catgctgttc accccgtctc     5580

agcttgggtc ccttcttgag ggcgctttca gaactcgaaa gccctcactg aacaccgtca     5640

atgtggttgg gtcctccatg ggctctggtg gagtgttcac catcgacggg aaaattaggt     5700

gcgtgactgc cgcacatgtc cttacgggta attcggctag ggtttccgga gtcggcttca     5760

atcaaatgct tgactttgat gtgaaagggg acttcgccat agctgattgc ccgaattggc     5820

aaggagctgc tcccaagacc caattctgcg aggacggatg gactggccgt gcctattggc     5880

tgacatcctc tggcgtcgaa cccggtgtta ttgggaatgg attcgccttc tgcttcaccg     5940

cgtgcggcga ttccgggtcc ccagtgatca ccgaagctgg tgagattgtc ggcgttcaca     6000

caggatcaaa taaacaagga ggtggcatcg tcacgcgccc ttcaggccag ttttgtaacg     6060

tggcacccat caagctgagc gaattaagtg aattctttgc tggacccaag gtcccgctcg     6120

gtgatgtgaa ggttggcagc cacataatta aagacacgtg cgaagtacct tcagatcttt     6180

gcgccttgct tgctgccaaa cctgaactgg agggaggcct ctccaccgtc caacttctgt     6240

gtgtgttttt cctactgtgg agaatgatgg gacatgcctg gacgcccttg gttgctgtgg     6300

ggtttttcat tctgaatgag gttctcccag ctgtcctggt tcggagtgtt ttctcctttg     6360

ggatgtttgt gctatcttgg ctcacaccat ggtctgcgca agttctgatg atcaggcttc     6420

taacagcagc tcttaacagg aacagatggt cacttgcctt ttacagcctt ggtgcggtga     6480

ccggttttgt cgcagatctt gcggtaactc aagggcaccc gttgcaggca gtaatgaatt     6540

tgagcaccta tgccttcctg cctcggatga tggttgtgac ctcaccagtc ccagtgattg     6600

cgtgtggtgt tgtgcaccta cttgccatca ttttgtactt gttcaagtac cgcggcctgc     6660

acaatgttct tgttggtgat ggagcgtttt ctgcagcttt cttcttgcga tactttgccg     6720

agggaaagtt gagggaaggg gtgtcgcaat cctgcggaat gaatcatgag tcattgactg     6780

gtgccctcgc tatgagactc aatgacgagg acttggactt ccttacgaaa tggactgatt     6840

ttaagtgctt tgtttctgcg tccaacatga ggaatgcagc aggccaattc atcgaggctg     6900

cctatgcaaa agcacttaga attgaacttg cccagttggt gcaggttgat aaggttcgag     6960

gtactttggc caagcttgag gcttttgctg ataccgtggc accccaactc tcgcccggtg     7020

acattgttgt tgctcttggc catacgcctg ttggcagcat cttcgaccta aaggttggtg     7080

gtaccaagca tactctccaa gtcattgaga ccagagtcct tgccgggtcc aaaatgaccg     7140

tggcgcgcgt cgttgaccca acccccacgc ccccacccgc acccgtgccc atccccctcc     7200

caccgaaagt tctagagaat ggtcccaacg cctgggggga tggggaccgt ttgaataaga     7260

agaagaggcg taggatggaa accgtcggca tctttgtcat gggtgggaag aagtaccaga     7320

aattttggga caagaattcc ggtgatgtgt tttacgagga ggtccatgac aacacagatg     7380

cgtgggagtg cctcagagtt ggtgaccctg ccgactttaa ccctgagaag ggaactctgt     7440

gtgggcatac tactattgaa gataaggatt acaaagtcta cgcctcccca tctggcaaga     7500

agttcctggt ccccgtcaac ccagagagcg gaagagccca atgggaagct gcaaagcttt     7560

ccgtggagca ggcccttggc atgatgaatg tcgacggtga actgacggcc aaagaagtgg     7620

agaaactgaa aagaataatt gacaaacttc agggcctgac taaggagcag tgtttaaact     7680

gctagccgcc agcggcttga cccgctgtgg tcgcggcggc ttggttgtta ctgagacagc     7740

ggtaaaaata gtcaaatttc acaaccggac tttcacccta gggcctgtga atttaaaagt     7800

ggccagtgag gttgagctga aagacgcggt cgagcacaac caacacccgg ttgcaagacc     7860

ggttgacggt ggtgttgtgc tcctgcgttc cgcagttcct tcgcttatag atgtcctgat     7920

ctccggtgct gacgcatctc ctaagttact cgctcgtcac gggccgggga acactgggat     7980

cgatggcacg ctttgggact ttgaggccga ggccaccaaa gaggaaattg cgctcagtgc     8040

gcaaataata caggcttgtg acattaggcg cggtgacgca cctgaaattg gtctccctta     8100

caagctgtac cctgttaggg gcaaccctga gcgggtaaaa ggagttttac agaatacaag     8160

gtttggagac ataccttaca aaacccccag tgacactggg agcccagtgc acgcggctgc     8220

ctgcctcacg cccaatgcca ctccggtgac tgatgggcgc tccgtcttgg ctactaccat     8280

gccctccggt tttgaattgt atgtaccgac cattccagcg tctgtccttg attatcttga     8340

ctctaggcct gactgcccca aacagttgac agagcacggc tgtgaggatg ccgcattgag     8400

agacctctcc aagtatgact tgtccaccca aggctttgtt ttacctgggg ttcttcgcct     8460

tgtgcgtaag tacctgtttg cccacgtggg taagtgcccg cccgttcatc ggccttccac     8520

ttaccctgcc aagaattcta tggctggaat aaatgggaac aggtttccaa ccaaggacat     8580

tcagagcgtc cccgaaatcg acgttctgtg cgcacaggcc gtgcgagaaa actggcaaac     8640

tgttacccct tgtaccctca agaaacagta ttgtgggaag aagaagacta ggacaatact     8700

cggcaccaat aatttcattg cgttggccca ccgggcagcg ttgagtggtg tcacccaggg     8760

cttcatgaaa aaggcgttta actcgcccat cgccctcggg aaaaacaaat ttaaggagct     8820

acagactccg atcttaggca ggtgccttga agctgatctt gcatcctgtg atcgatccac     8880

acctgcaatt gtccgctggt ttgccgccaa ccttctttat gaacttgcct gtgctgaaga     8940

gcacctaccg tcgtacgtgc tgaactgctg ccatgaccta ttggtcacgc agtccggcgc     9000

agtgactaag aggggtggcc tgtcgtctgg cgacccgatc acttctgtgt ctaacaccat     9060

ttacagcttg gtgatatatg cacagcacat ggtgcttagt tactttaaaa gtggtcaccc     9120

tcatggcctt ctgttcctac aagaccagct gaagttcgag gacatgctca aagtccaacc     9180

cctgatcgtc tattcggacg acctcgtgct gtatgccgaa tctcccacca tgccgaacta     9240

ccactggtgg gtcgaacatc tgaatttgat gctgggtttt cagacggacc caaagaagac     9300

agccataacg gactcgccat catttctagg ctgtaggata ataaatggac gccagctagt     9360

ccccaaccgt gacaggatcc tcgcggccct cgcttaccat atgaaggcaa gcaatgtttc     9420

tgaatactac gccgcggcgg ctgcaatact catggacagc tgtgcttgtt tagagtatga     9480

tcctgaatgg tttgaagagc ttgtggttgg gatagcgcag tgcgcccgca aggacggcta     9540

cagctttccc ggcccgccgt tcttcttgtc catgtgggaa aaactcagat ccaatcatga     9600

ggggaagaag tccagaatgt gcgggtattg cggggccccg gctccgtacg ccactgcctg     9660

tggcctcgac gtctgtattt accacaccca cttccaccag cattgtccag tcacaatctg     9720

gtgtggccac ccggctggtt ctggttcttg tagtgagtgc aaaccccccc tagggaaagg     9780

cacaagccct ctagatgagg tgttagaaca agtcccgtat aagcctccac ggactgtaat     9840

catgcatgtg gagcagggtc tcacccctct tgacccaggc agataccaga ctcgccgcgg     9900

attagtctcc gttaggcgtg gcatcagagg aaatgaagtt gacctaccag acggtgatta     9960

tgctagcacc gccctactcc ccacttgtaa agagatcaac atggtcgctg tcgcctctaa    10020

tgtgttgcgc agcaggttca tcatcggtcc gcccggtgct gggaaaacat actggctcct    10080

tcagcaggtc caggatggtg atgtcattta cacaccgact caccagacca tgctcgacat    10140

gattagggct ttggggacgt gccggttcaa cgtcccagca ggtacaacgc tgcaattccc    10200

tgccccctcc cgtaccggcc cgtgggttcg catcctagcc ggcggttggt gtcctggtaa    10260

gaattccttc ttggatgaag cagcgtattg taatcacctt gatgtcttga ggctccttag    10320

caaaaccacc ctcacctgtc tgggagactt caaacaactc cacccagtgg gttttgattc    10380

tcattgctat gtttttgaca tcatgcctca gacccagttg aagaccatct ggagattcgg    10440

acagaacatc tgtgatgcca tccaaccaga ttacagggac aaacttgtgt ccatggtcaa    10500

cacaacccgt gtaacctacg tggaaaaacc tgtcaagtat gggcaagtcc tcacccctta    10560

ccacagggac cgagaggacg gcgccatcac aattgactcc agtcaaggcg ccacatttga    10620

tgtggtcaca ctgcatttgc ccactaaaga ttcactcaac aggcaaagag cccttgttgc    10680

tatcaccagg gcaagacatg ctatctttgt gtatgaccca cacaggcaat tgcagagcat    10740

gtttgatctt cctgcgaagg gcacacccgt caacctcgca gtgcaccgtg atgagcagct    10800

gatcgtactg gatagaaata ataaagaatg cacagttgct caggctctag gcaacggaga    10860

taaatttagg gccaccgaca agcgcgttgt agattctctc cgcgccattt gtgctgatct    10920

ggaagggtcg agctctccgc tccccaaggt cgcacacaac ttgggatttt atttctcacc    10980

tgatttgaca cagtttgcta aactcccggt agaccttgca ccccactggc ccgtggtgac    11040

aacccagaac aatgaaaagt ggccggatcg gctggttgcc agccttcgcc ctgtccataa    11100

gtatagccgt gcgtgcattg gtgccggcta tatggtgggc ccctcggtgt ttctaggcac    11160

ccctggggtc gtgtcatact acctcacaaa atttgtcaag ggcgaggctc aagtgcttcc    11220

ggagacagtc ttcagcaccg gccgaattga ggtggattgc cgggagtatc ttgatgacag    11280

ggagcgagaa gttgctgagt ccctcccaca tgccttcatt ggcgacgtca aaggcaccac    11340

cgttggggga tgtcatcatg tcacctccaa ataccttccg cgcttccttc ccaaggaatc    11400

agtcgcggta gtcggggttt cgagccccgg gaaagccgca aaagcagtgt gcacattgac    11460

ggatgtgtac ctcccagacc ttgaggccta cctccaccca gagactcagt ccaagtgctg    11520

gaaagttatg ttggacttca aggaagttcg actgatggtc tggaaagaca agacggccta    11580

tttccaactt gaaggccgct atttcacctg gtatcagctt gcaagctacg cctcgtacat    11640

ccgtgttcct gtcaactcca cggtgtatct ggacccctgc atgggccctg ccctttgcaa    11700

cagaagagtt gtcgggtcca cccattgggg agctgacctc gcagtcaccc cttatgatta    11760

cggtgctaaa atcatcttgt ctagcgctta ccatggtgaa atgcctcctg gatacaagat    11820

tctggcgtgc gcggagttct cgctcgacga cccagtcaag tacaaacaca cctggggttt    11880

tgaatcggat acagcgtatc tgtatgagtt caccggaaac ggtgaggact gggaggatta    11940

caatgatgcg tttcgtgcgc gccagaaagg gaaaatttat aaggccactg ctaccagcat    12000

gaagttttat tttcccccgg gccccgtcat tgaaccaact ttaggcctga attgaaatga    12060

aatggggtct atacaaagcc tcttcgacaa aattggccag ctttttgtgg atgctttcac    12120

ggaatttttg gtgtccattg ttgatatcat catatttttg gccattttgt ttggcttcac    12180

catcgccggt tggctggtgg tcttttgcat cagattggtt tgctccgcgg tattccgtgc    12240

gcgccctgcc attcaccctg agcaattaca gaagatccta tgaggccttt ctttctcagt    12300

gccgggtgga cattcccacc tggggggtaa aacacccttt ggggatgttt tggcaccata    12360

aggtgtcaac cctgattgat gaaatggtgt cgcgtcgaat gtaccgcatc atggaaaaag    12420

cagggcaagc tgcctggaaa caggtggtga gcgaggctac gctgtctcgc attagtagtt    12480

tggatgtggt ggctcatttt caacatcttg ccgccattga agccgagacc tgtaaatatt    12540

tggcttctcg actgcccatg ctacacaacc tgcgcatgac agggtcaaat gtaaccatag    12600

tgtataatag cactttaaat caggtgtttg ctatttttcc aacccctggt tcccggccaa    12660

agcttcatga ttttcagcaa tggctaatag ctgtacattc ctccatattt tcctctgttg    12720

cagcttcttg tactcttttt gttgtgctgt ggttgcgggt tccaatgcta cgtactgttt    12780

ttggtttccg ctggttaggg gcaatttttc tttcgaactc atggtgaatt acacggtgtg    12840

tccaccttgc ctcacccgac aagcagccgc tgaggtcctt gaacccggta ggtctctttg    12900

gtgcaggata gggcatgacc gatgtgggga ggacgatcac gacgaactgg ggttcatggt    12960

tccgcctggc ctctccagcg aaagccactt gaccagtgtt tacgcctggt tggcgttcct    13020

gtccttcagc tacacggccc agttccatcc cgagatattt gggataggga acgtgagtga    13080

agtttatgtt gacatcaagc accaattcat ctgcgccgtt catgacgggc agaacaccac    13140

cttgcctcgc catgacaata tttcagccgt atttcagacc tactatcaac atcaggtcga    13200

cggcggcaat tggtttcacc tagaatggct gcgtcccttc ttttcctctt ggttggtttt    13260

aaatgtttcg tggtttctca ggcgttcgcc tgcaagccat gtttcagttc gagtctttca    13320

gacatcaaaa ccaacactac cgcagcatca ggctttgttg tcctccagga catcagctgc    13380

cttaggcatg gcgactcgtc ctttccgacg attcgcaaaa gctctcaatg ccgcacggcg    13440

atagggacac ctgtgtatat caccatcaca gccaatgtga cagatgagaa ttacttacat    13500

tcttctgatc tcctcatgct ttcttcttgc cttttctatg cttctgagat gagtgaaaag    13560

ggattcaagg tggtatttgg caatgtgtca ggcatcgtgg ctgtgtgtgt caactttacc    13620

agctacgtcc aacatgtcaa agagtttacc caacgctcct tggtggtcga tcatgtgcgg    13680

ctgcttcatt tcatgacacc tgagaccatg aggtgggcaa ccgttttagc ctgtcttttt    13740

gccatcctac tggcaatttg aatgttcaag tatgttgggg aaatgcttga ccgcgggctg    13800

ttgctcgcga ttgctttctt tgtggtgtat cgtgccgttc tggtttgctg tgctcggcaa    13860

cgccaacagc agcagcagct ctcattttca gttgatttat aacttgacgc tatgtgagct    13920

gaatggcaca gattggctgg cagaaaaatt tgattgggca gtggagactt ttgtcatctt    13980

tcccgtgttg actcacattg tttcctatgg tgcactcacc accagccatt tccttgacac    14040

agttggtctg gttactgtgt ccaccgccgg gttttatcac gggcggtatg tcttgagtag    14100

catctacgcg gtctgtgctc tggctgcgtt gatttgcttc gttattaggc ttgcgaagaa    14160

ctgcatgtcc tggcgctact cttgtaccag atataccaac ttccttctgg acactaaggg    14220

cagactctat cgttggcggt cgcccgttat catagaaaaa gggggtaagg ttgaggtcga    14280

aggtcatctg atcgacctca aaagagttgt gcttgatggt tccgtggcaa cccctttaac    14340

cagagtttca gcggaacaat ggggtcgtct ctagacgact tttgccatga tagcacggct    14400

ccacaaaagg tgcttttggc gttttccatt acctacacgc cagtaatgat atatgctcta    14460

aaggtaagtc gcggccgact gctagggctt ctgcaccttt tgatctttct gaattgtgct    14520

tttaccttcg ggtacatgac attcgcgcac tttcagagca caaatagggt cgcgctcgct    14580

atgggagcag tagttgcact tctttggggg gtgtactcag ccatagaaac ctggaaattc    14640

atcacctcca gatgccgttt gtgcttgcta ggccgcaagt acattctggc ccctgcccac    14700

cacgtcgaaa gtgccgcggg ctttcatccg attgcggcaa atgataacca cgcatttgtc    14760

gtccggcgtc ccggctccat tacggttaac ggcacattgg tgcccgggtt gaaaagcctc    14820

gtgttgggtg gcagaaaagc tgttaaacag ggagtggtaa accttgtcaa atatgccaaa    14880

taacaacggc aagcagcaaa agaaaaagaa ggggaatggc cagccagtca accagctgtg    14940

ccagatgctg ggtaaaatca tcgcccagca aaaccagtcc agaggcaagg gaccgggctc    15000

taagaagaaa tccccggaga agccccattt tcctctagcg accgaagatg acgtcaggca    15060

tcacttcacc cctggtgagc ggcaattgtg tctgtcgtcg atccagactg cctttaacca    15120

gggcgctgga acttgtaccc tgtcagattc agggaggata agttacactg tggagtttag    15180

tttgccgacg catcatactg tgcgcctgat ccgcgtcaca gcatcaccct cagcatgatg    15240

ggctggcatt ctttaggcac ctcagtgtca gaattggaag aatgtgtggt ggatggcact    15300

gattgacatt gtgcctctaa gtcacctatt caattagggc gaccgtgtgg gggtaaaatt    15360

taattggcga gaaccatgcg gccgcaatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa    15420

aaaaaaaaaa aaaaaaaaaa aaaa                                           15444


<210>  3
<211>  15450
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  P129-PK-FL passage 24 complete genome (15,450 nt) full length 
       vaccine

<400>  3
atgacgtata ggtgttggct ctatgccacg gcatttgtat tgtcaggagc tgtgaccatt       60

ggcacagccc aaaacttgct gcacggaaaa cgcccttctg tgacagcctt cttcagggga      120

gcttaggggt ctgtccctag caccttgctt ctggagttgc actgctttac ggtctctcca      180

cccctttaac catgtctggg atacttgatc ggtgcacgtg cacccccaat gccagggtgt      240

ttatggcgga gggccaagtc tactgcacac gatgtctcag tgcacggtct ctccttcctc      300

tgaatctcca agttcctgag cttggggtgc tgggcctatt ttataggccc gaagagccac      360

tccggtggac gttgccacgt gcattcccca ctgtcgagtg ctcccctgcc ggggcctgct      420

ggctttctgc gatctttcca attgcacgaa tgaccagtgg aaacctgaac tttcaacaaa      480

gaatggtgcg ggttgcagct gagatttaca gagccggcca actcacccct gcagttttga      540

aggctctaca agtttatgaa cggggttgtc gctggtaccc cattgtcgga cctgtccctg      600

gagtggccgt ttacgccaac tccctacatg tgagtgacaa acctttcccg ggagcaactc      660

atgtgttaac caacctaccg ctcccgcaga ggcccaagcc tgaagacttt tgcccttttg      720

agtgtgctat ggctaacgtc tatgacattg gccataacgc cgtcatgtat gtggccagag      780

ggaaagtctc ctgggcccct cgtggcgggg atgaagtgaa atttgaaacc gtccccgaag      840

agttgaagtt gattgcgaac cgactccaca tctccttccc gccccaccac gcagtggaca      900

tgtctgagtt tgccttcata gcccctggga gtggtgtctc cttgcgggtc gagcaccaac      960

acggctgcct tcccgctgat actgtccctg atgggaactg ctggtggtac ttgtttgact     1020

tgctcccacc ggaagttcag aataaagaaa ttcgccgtgc taaccaattt ggctatcaaa     1080

ccaagcatgg tgtccatggc aagtacctac agcggaggct gcaagttaat ggtctccgag     1140

cagtgactga tacagatgga cctattgtcg tacagtactt ctctgttagg gagagttgga     1200

tccgccactt cagactggcg gaagaaccta gcctccctgg gtttgaagac ctcctcagaa     1260

taagggtaga gcctaatacg tcgccaatgg gtggcaaggg tgaaaaaatc ttccggtttg     1320

gcagtcacaa gtggtacggt gctggaaaga gagcaaggag agcacgctct ggtgcgactg     1380

ccacggtcgc tcaccgcgct ttgcccgctc gcgaagccca gcaggccaag aagctcgagg     1440

ttgccagcgc caacagggct gagcatctca agtactattc cccgcctgcc gacgggaact     1500

gtggttggca ctgcatttcc gccattacca accggatggt gaattccaaa tttgaaacca     1560

ctcttcccga gagagtgaga ccttcagatg actgggctac tgacgaggat cttgtgaata     1620

ccatccaaat cctcaggctc cccgcggcct tggacaggaa cggtgcttgt gctggcgcca     1680

agtacgtgct caagctggaa ggtgagcact ggaccgtctc tgtgacccct gggatgaccc     1740

cttctttgct cccccttgaa tgtgttcagg gttgttgtga gcataagagc ggtcttggtt     1800

tcccagacgt ggtcgaagtt tccggatttg accctgcctg tcttgaccga cttgctgaga     1860

taatgcactt gcctagcagt gtcatcccag ctgctctggc cgagatgtcc gacgacttca     1920

atcgtctggc ttccccggcc gccactgtgt ggactgtttc gcaattcttt gcccgccaca     1980

gaggaggaga gcatcctgac caggtgtgct tagggaaaat tatcaacctt tgtcaggtga     2040

ttgaggaatg ctgctgttcc cggaacaaag ccaaccgggc taccccggaa gaggttgcgg     2100

caaaagttga ccagtacctc cgtggtgcag caagccttgg agaatgcttg gccaagcttg     2160

agagggctcg cccgccgagc gcgacggaca cctcctttga ttggaatgtt gtgcttcctg     2220

gggttgagac ggcgaatcag acaaccaaac agctccatgt caaccagtgc cgcgctctgg     2280

ttcctgtcgt gactcaagag cctttggaca gagactcggt ccctctgacc gccttctcgc     2340

tgtccaattg ctactaccct gcacaaggtg acgaggtccg tcaccgtgag aggctaaact     2400

ccttgctctc taagttggag ggggttgttc gtgaggaata tgggctcacg ccaactggac     2460

ctggcccgcg acccgcactg ccgaacgggc tcgacgagct taaagaccag atggaggagg     2520

atctgctgaa attagtcaac gcccaggcaa cttcagaaat gatggcctgg gcagccgagc     2580

aggttgatct aaaagcttgg gtcaaaaatt acccacggtg gacaccgcca ccccctccac     2640

caagagttca gcctcgaaaa acgaagtctg tcaagagctt gctagagaac aagcctgtcc     2700

ctgctccgcg caggaaggtc agatctgatt gtggcagccc gattttgatg ggcgacaatg     2760

ttcctaacgg ttgggaagat tcgactgttg gtggtcccct tgatctttcg gcaccatccg     2820

agccgatgac acctctgagt gagcctgtac ttatttccag gccagtgaca tctttgagtg     2880

tgccggcccc agttcctgca ccgcgtagag ctgtgtcccg accgatgacg ccctcgagtg     2940

agccaatttt tgtgtctgca ctgcgacaca aatttcagca ggtggaaaaa gcaaatctgg     3000

cggcagcagc gccgatgtgc caggacgaac ccttagattt gtctgcatcc tcacagactg     3060

aatatgaggc ttccccccta acaccaccgc agaacgtggg cattctggag gtaagggggc     3120

aagaagctga ggaagttctg agtgaaatct cggatattct gaatgatacc aaccctgcac     3180

ctgtgtcatc aagcagctcc ctgtcaagtg ttaagatcac acgcccaaaa tactcagctc     3240

aagccattat cgactcgggc gggccctgca gtgggcacct ccaaagggaa aaagaagcat     3300

gcctccgcat catgcgtgag gcttgtgatg cggccaagct tagtgaccct gccacgcagg     3360

aatggctttc tcgcatgtgg gatagggtgg acatgctgac ttggcgcaac acgtctgctt     3420

accaggcgtt tcgcacctta gatggcaggt ttgggtttct cccaaagatg atactcgaga     3480

cgccgccgcc ctacccgtgt gggtttgtga tgttgcctca cacccctgca ccttccgtga     3540

gtgcagagag cgaccttacc attggttcag tcgccactga agatattcca cgcatcctcg     3600

ggaaaataga aaataccggt gagatgatca accagggacc cttggcatcc tctgaggaag     3660

aaccggtata caaccaacct gccaaagact cccggatatc gtcgcggggg tctgacgaga     3720

gcacagcagc tccgtccgcg ggtacaggtg gcgccggctt atttactgat ttgccacctt     3780

cagacggcgt agatgcggac ggtggggggc cgttgcagac ggtaagaaag aaagctgaaa     3840

ggctcttcga ccaattgagc cgtcaggttt ttaacctcgt ctcccatctc cctgttttct     3900

tctcacacct cttcaaatct gacagtggtt attctccggg tgattggggt tttgcagctt     3960

ttactctatt ttgcctcttt ttgtgttaca gctacccatt cttcggtttc gttcccctct     4020

tgggtgtatt ttctgggtct tctcggcgtg tgcgcatggg ggtttttggc tgctggctgg     4080

cttttgctgt tggcctgttc aagcctgtgt ccgacccagt cggcactgct tgtgagtttg     4140

actcgccaga gtgcaggaac gtccttcatt cttttgagct tctcaaacct tgggaccctg     4200

ttcgcagcct tgttgtgggc cccgtcggtc tcggtcttgc cattcttggc aggttactgg     4260

gcggggcacg ctacatctgg cattttttgc ttaggcttgg cattgttgca gattgtatct     4320

tggctggagc ttatgtgctt tctcaaggta ggtgtaaaaa gtgctgggga tcttgtataa     4380

gaactgctcc taatgaaatc gccttcaacg tgttcccttt tacacgtgcg accaggtcgt     4440

cactcatcga cctgtgcgat cggttttgtg cgccaacagg catggacccc attttcctcg     4500

ccactgggtg gcgtgggtgc tggaccggcc gaagtcccat tgagcaaccc tctgaaaaac     4560

ccatcgcgtt cgcccagttg gatgaaaaga ggattacggc tagaactgtg gtcgctcagc     4620

cttatgatcc taatcaagcc gtgaagtgct tgcgggtgtt acaggcgggt ggggcgatgg     4680

tggccgaggc agtcccaaaa gtggccaaag tttctgctat tccattccga gccccttttt     4740

ttcccaccgg agtgaaagtt gatcccgagt gcaggatcgt ggttgacccc gatactttta     4800

ctacagccct ccggtctggt tactctacca caaacctcgt ccttggtgtg ggggactttg     4860

cccagctgaa tggactaaag atcaggcaaa tttccaagcc ttcgggagga ggcccacacc     4920

tcattgctgc cctgcatgtt gcctgctcga tggcgttgca catgcttgct ggggtttatg     4980

taacttcagt ggggtcttgc ggtgccggca ccaacgatcc atggtgcact aatccgtttg     5040

ccgttcctgg ctacggacca ggctctctct gcacgtccag attgtgcatc tcccaacatg     5100

gccttaccct gcccttgaca gcacttgtgg cgggattcgg tcttcaggaa atcgccttgg     5160

tcgttttgat tttcgtttcc atcggaggca tggctcatag gttgagttgt aaggctgata     5220

tgctgtgcat tttacttgca atcgccagct atgtttgggt accccttacc tggttgcttt     5280

gtgtgtttcc ttgttggttg cgctggttct ctttgcaccc ccttaccatc ctatggttgg     5340

tgtttttctt gatttctgta aatatgcctt cgggaatctt ggccgtggtg ttattggttt     5400

ctctttggct tttgggacgt tatactaaca ttgctggtct tgtcaccccc tatgatattc     5460

atcattacac cagtggcccc cgcggtgttg ccgccttggc taccgcacca gatggaacct     5520

acttggctgc cgtccgccgc gctgcgttga ctggtcgcac catgctgttc accccgtctc     5580

agcttgggtc ccttcttgag ggcgctttca gaactcgaaa gccctcactg aacaccgtca     5640

atgtggttgg gtcctccatg ggctctggtg gagtgttcac catcgacggg aaaattaggt     5700

gcgtgactgc cgcacatgtc cttacgagta attcggctag ggtttccgga gtcggcttca     5760

atcaaatgct tgactttgat gtgaaagggg acttcgccat agctgattgc ccgaattggc     5820

aaggagctgc tcccaagacc caattctgcg aggacggatg gactggccgt gcctattggc     5880

tgacatcctc tggcgtcgaa cccggtgtta ttgggaatgg attcgccttc tgcttcaccg     5940

cgtgcggcga ttccgggtcc ccagtgatca ccgaagctgg tgagattgtc ggcgttcaca     6000

caggatcaaa taaacaagga ggtggcatcg tcacgcgccc ttcaggccag ttttgtaacg     6060

tggcacccat caagctgagc gaattaagtg aattctttgc tggacccaag gtcccgctcg     6120

gtgatgtgaa ggttggcagc cacataatta aagacacgtg cgaagtacct tcagatcttt     6180

gcgccttgct tgctgccaaa cctgaactgg agggaggcct ctccaccgtc caacttctgt     6240

gtgtgttttt cctactgtgg agaatgatgg gacatgcctg gacgcccttg gttgctgtgg     6300

ggtttttcat tctgaatgag gttctcccag ctgtcctggt tcggagtgtt ttctcctttg     6360

ggatgtttgt gctatcttgg ctcacaccat ggtctgcgca agttctgatg atcaggcttc     6420

taacagcagc tcttaacagg aacagatggt cacttgcctt ttacagcctt ggtgcggtga     6480

ccggttttgt cgcagatctt gcggtaactc aagggcaccc gttgcaggca gtaatgaatt     6540

tgagcaccta tgccttcctg cctcggatga tggttgtgac ctcaccagtc ccagtgattg     6600

cgtgtggtgt tgtgcaccta cttgccatca ttttgtactt gttcaagtac cgcggcctgc     6660

acaatgttct tgttggtgat ggagcgtttt ctgcagcttt cttcttgcga tactttgccg     6720

agggaaagtt gagggaaggg gtgtcgcaat cctgcggaat gaatcatgag tcattgactg     6780

gtgccctcgc tatgagactc aatgacgagg acttggactt ccttacgaaa tggactgatt     6840

ttaagtgctt tgtttctgcg tccaacatga ggaatgcagc aggccaattc atcgaggctg     6900

cctatgcaaa agcacttaga attgaacttg cccagttggt gcaggttgat aaggttcgag     6960

gtactttggc caagcttgag gcttttgctg ataccgtggc accccaactc tcgcccggtg     7020

acattgttgt tgctcttggc catacgcctg ttggcagcat cttcgaccta aaggttggtg     7080

gtaccaagca tactctccaa gtcattgaga ccagagtcct tgccgggtcc aaaatgaccg     7140

tggcgcgcgt cgttgaccca acccccacgc ccccacccgc acccgtgccc atccccctcc     7200

caccgaaagt tctagagaat ggtcccaacg cctgggggga tggggaccgt ttgaataaga     7260

agaagaggcg taggatggaa accgtcggca tctttgtcat gggtgggaag aagtaccaga     7320

aattttggga caagaattcc ggtgatgtgt tttacgagga ggtccatgac aacacagatg     7380

cgtgggagtg cctcagagtt ggtgaccctg ccgactttaa ccctgagaag ggaactctgt     7440

gtgggcatac tactattgaa gataaggatt acaaagtcta cgcctcccca tctggcaaga     7500

agttcctggt ccccgtcaac ccagagagcg gaagagccca atgggaagct gcaaagcttt     7560

ccgtggagca ggcccttggc atgatgaatg tcgacggtga actgacggcc aaagaagtgg     7620

agaaactgaa aagaataatt gacaaacttc agggcctgac taaggagcag tgtttaaact     7680

gctagccgcc agcggcttga cccgctgtgg tcgcggcggc ttggttgtta ctgagacagc     7740

ggtaaaaata gtcaaatttc acaaccggac tttcacccta gggcctgtga atttaaaagt     7800

ggccagtgag gttgagctga aagacgcggt cgagcacaac caacacccgg ttgcaagacc     7860

ggttgacggt ggtgttgtgc tcctgcgttc cgcagttcct tcgcttatag atgtcctgat     7920

ctccggtgct gacgcatctc ctaagttact cgctcgtcac gggccgggga acactgggat     7980

cgatggcacg ctttgggact ttgaggccga ggccaccaaa gaggaaattg cgctcagtgc     8040

gcaaataata caggcttgtg acattaggcg cggtgacgca cctgaaattg gtctccctta     8100

caagctgtac cctgttaggg gcaaccctga gcgggtaaaa ggagttttac agaatacaag     8160

gtttggagac ataccttaca aaacccccag tgacactggg agcccagtgc acgcggctgc     8220

ctgcctcacg cccaatgcca ctccggtgac tgatgggcgc tccgtcttgg ctactaccat     8280

gccctccggt tttgaattgt atgtaccgac cattccagcg tctgtccttg attatcttga     8340

ctctaggcct gactgcccca aacagttgac agagcacggc tgtgaggatg ccgcattgag     8400

agacctctcc aagtatgact tgtccaccca aggctttgtt ttacctgggg ttcttcgcct     8460

tgtgcgtaag tacctgtttg cccacgtggg taagtgcccg cccgttcatc ggccttccac     8520

ttaccctgcc aagaattcta tggctggaat aaatgggaac aggtttccaa ccaaggacat     8580

tcagagcgtc cccgaaatcg acgttctgtg cgcacaggcc gtgcgagaaa actggcaaac     8640

tgttacccct tgtaccctca agaaacagta ttgtgggaag aagaagacta ggacaatact     8700

cggcaccaat aatttcattg cgttggccca ccgggcagcg ttgagtggtg tcacccaggg     8760

cttcatgaaa aaggcgttta actcgcccat cgccctcggg aaaaacaaat ttaaggagct     8820

acagactccg atcttaggca ggtgccttga agctgatctt gcatcctgtg atcgatccac     8880

acctgcaatt gtccgctggt ttgccgccaa ccttctttat gaacttgcct gtgctgaaga     8940

gcacctaccg tcgtacgtgc tgaactgctg ccatgaccta ttggtcacgc agtccggcgc     9000

agtgactaag aggggtggcc tgtcgtctgg cgacccgatc acttctgtgt ctaacaccat     9060

ttacagcttg gtgatatatg cacagcacat ggtgcttagt tactttaaaa gtggtcaccc     9120

tcatggcctt ctgttcctac aagaccagct gaagttcgag gacatgctca aagtccaacc     9180

cctgatcgtc tattcggacg acctcgtgct gtatgccgaa tctcccacca tgccgaacta     9240

ccactggtgg gtcgaacatc tgaatttgat gctgggtttt cagacggacc caaagaagac     9300

agccataacg gactcgccat catttctagg ctgtaggata ataaatggac gccagctagt     9360

ccccaaccgt gacaggatcc tcgcggccct cgcttaccat atgaaggcaa gcaatgtttc     9420

tgaatactac gccgcggcgg ctgcaatact catggacagc tgtgcttgtt tagagtatga     9480

tcctgaatgg tttgaagagc ttgtggttgg gatagcgcag tgcgcccgca aggacggcta     9540

cagctttccc ggcccgccgt tcttcttgtc catgtgggaa aaactcagat ccaatcatga     9600

ggggaagaag tccagaatgt gcgggtattg cggggccccg gctccgtacg ccactgcctg     9660

tggcctcgac gtctgtattt accacaccca cttccaccag cattgtccag tcacaatctg     9720

gtgtggccac ccggctggtt ctggttcttg tagtgagtgc aaaccccccc tagggaaagg     9780

cacaagccct ctagatgagg tgttagaaca agtcccgtat aagcctccac ggactgtaat     9840

catgcatgtg gagcagggtc tcacccctct tgacccaggc agataccaga ctcgccgcgg     9900

attagtctcc gttaggcgtg gcatcagagg aaatgaagtt gacctaccag acggtgatta     9960

tgctagcacc gccctactcc ccacttgtaa agagatcaac atggtcgctg tcgcctctaa    10020

tgtgttgcgc agcaggttca tcatcggtcc gcccggtgct gggaaaacat actggctcct    10080

tcagcaggtc caggatggtg atgtcattta cacaccgact caccagacca tgctcgacat    10140

gattagggct ttggggacgt gccggttcaa cgtcccagca ggtacaacgc tgcaattccc    10200

tgccccctcc cgtaccggcc cgtgggttcg catcctagcc ggcggttggt gtcctggtaa    10260

gaattccttc ttggatgaag cagcgtattg taatcacctt gatgtcttga ggctccttag    10320

caaaaccacc ctcacctgtc tgggagactt caaacaactc cacccagtgg gttttgattc    10380

tcattgctat gtttttgaca tcatgcctca gacccagttg aagaccatct ggagattcgg    10440

acagaacatc tgtgatgcca tccaaccaga ttacagggac aaacttgtgt ccatggtcaa    10500

cacaacccgt gtaacctacg tggaaaaacc tgtcaagtat gggcaagtcc tcacccctta    10560

ccacagggac cgagaggacg gcgccatcac aattgactcc agtcaaggcg ccacatttga    10620

tgtggtcaca ctgcatttgc ccactaaaga ttcactcaac aggcaaagag cccttgttgc    10680

tatcaccagg gcaagacatg ctatctttgt gtatgaccca cacaggcaat tgcagagcat    10740

gtttgatctt cctgcgaagg gcacacccgt caacctcgca gtgcaccgtg atgagcagct    10800

gatcgtactg gatagaaata ataaagaatg cacagttgct caggctctag gcaacggaga    10860

taaatttagg gccaccgaca agcgcgttgt agattctctc cgcgccattt gtgctgatct    10920

ggaagggtcg agctctccgc tccccaaggt cgcacacaac ttgggatttt atttctcacc    10980

tgatttgaca cagtttgcta aactcccggt agaccttgca ccccactggc ccgtggtgac    11040

aacccagaac aatgaaaagt ggccggatcg gctggttgcc agccttcgcc ctgtccataa    11100

gtatagccgt gcgtgcattg gtgccggcta tatggtgggc ccctcggtgt ttctaggcac    11160

ccctggggtc gtgtcatact acctcacaaa atttgtcaag ggcgaggctc aagtgcttcc    11220

ggagacagtc ttcagcaccg gccgaattga ggtggattgc cgggagtatc ttgatgacag    11280

ggagcgagaa gttgctgagt ccctcccaca tgccttcatt ggcgacgtca aaggcaccac    11340

cgttggggga tgtcatcatg tcacctccaa ataccttccg cgcttccttc ccaaggaatc    11400

agtcgcggta gtcggggttt cgagccccgg gaaagccgca aaagcagtgt gcacattgac    11460

ggatgtgtac ctcccagacc ttgaggccta cctccaccca gagactcagt ccaagtgctg    11520

gaaagttatg ttggacttca aggaagttcg actgatggtc tggaaagaca agacggccta    11580

tttccaactt gaaggccgct atttcacctg gtatcagctt gcaagctacg cctcgtacat    11640

ccgtgttcct gtcaactcca cggtgtatct ggacccctgc atgggccctg ccctttgcaa    11700

cagaagagtt gtcgggtcca cccattgggg agctgacctc gcagtcaccc cttatgatta    11760

cggtgctaaa atcatcttgt ctagcgctta ccatggtgaa atgcctcctg gatacaagat    11820

tctggcgtgc gcggagttct cgctcgacga cccagtcaag tacaaacaca cctggggttt    11880

tgaatcggat acagcgtatc tgtatgagtt caccggaaac ggtgaggact gggaggatta    11940

caatgatgcg tttcgtgcgc gccagaaagg gaaaatttat aaggccactg ctaccagcat    12000

gaagttttat tttcccccgg gccccgtcat tgaaccaact ttaggcctga attgaaatga    12060

aatggggtct atacaaagcc tcttcgacaa aattggccag ctttttgtgg atgctttcac    12120

ggaatttttg gtgtccattg ttgatatcat catatttttg gccattttgt ttggcttcac    12180

catcgccggt tggctggtgg tcttttgcat cagattggtt tgctccgcgg tattccgtgc    12240

gcgccctgcc attcaccctg agcaattaca gaagatccta tgaggccttt ctttctcagt    12300

gccgggtgga cattcccacc tggggggtaa aacacccttt ggggatgttt tggcaccata    12360

aggtgtcaac cctgattgat gaaatggtgt cgcgtcgaat gtaccgcatc atggaaaaag    12420

cagggcaagc tgcctggaaa caggtggtga gcgaggctac gctgtctcgc attagtagtt    12480

tggatgtggt ggctcatttt caacatcttg ccgccattga agccgagacc tgtaaatatt    12540

tggcttctcg actgcccatg ctacacaacc tgcgcatgac agggtcaaat gtaaccatag    12600

tgtataatag cactttaaat caggtgtttg ctatttttcc aacccctggt tcccggccaa    12660

agcttcatga ttttcagcaa tggctaatag ctgtacattc ctccatattt tcctctgttg    12720

cagcttcttg tactcttttt gttgtgctgt ggttgcgggt tccaatgcta cgtactgttt    12780

ttggtttccg ctggttaggg gcaatttttc tttcgaactc atggtgaatt acacggtgtg    12840

tccaccttgc ctcacccgac aagcagccgc tgaggtcctt gaacccggta ggtctctttg    12900

gtgcaggata gggcatgacc gatgtgggga ggacgatcac gacgaactgg ggttcatggt    12960

tccgcctggc ctctccagcg aaagccactt gaccagtgtt tacgcctggt tggcgttcct    13020

gtccttcagc tacacggccc agttccatcc cgagatattt gggataggga acgtgagtga    13080

agtttatgtt gacatcaagc accaattcat ctgcgccgtt catgacgggc agaacaccac    13140

cttgcctcgc catgacaata tttcagccgt atttcagacc tactatcaac atcaggtcga    13200

cggcggcaat tggtttcacc tagaatggct gcgtcccttc ttttcctctt ggttggtttt    13260

aaatgtttcg tggtttctca ggcgttcgcc tgcaagccat gtttcagttc gagtctttca    13320

gacatcaaaa ccaacactac cgcagcatca ggctttgttg tcctccagga catcagctgc    13380

cttaggcatg gcgactcgtc ctttccgacg attcgcaaaa gctctcaatg ccgcacggcg    13440

atagggacac ctgtgtatat caccatcaca gccaatgtga cagatgagaa ttacttacat    13500

tcttctgatc tcctcatgct ttcttcttgc cttttctatg cttctgagat gagtgaaaag    13560

ggattcaagg tggtatttgg caatgtgtca ggcatcgtgg ctgtgtgtgt caactttacc    13620

agctacgtcc aacatgtcaa agagtttacc caacgctcct tggtggtcga tcatgtgcgg    13680

ctgcttcatt tcatgacacc tgagaccatg aggtgggcaa ccgttttagc ctgtcttttt    13740

gccatcctac tggcaatttg aatgttcaag tatgttgggg aaatgcttga ccgcgggctg    13800

ttgctcgcga ttgctttctt tgtggtgtat cgtgccgttc tggtttgctg tgctcggcaa    13860

cgccaacagc agcagcagct ctcattttca gttgatttat aacttgacgc tatgtgagct    13920

gaatggcaca gattggctgg cagaaaaatt tgattgggca gtggagactt ttgtcatctt    13980

tcccgtgttg actcacattg tttcctatgg tgcactcacc accagccatt tccttgacac    14040

agttggtctg gttactgtgt ccaccgccgg gttttatcac gggcggtatg tcttgagtag    14100

catctacgcg gtctgtgctc tggctgcgtt gatttgcttc gttattaggc ttgcgaagaa    14160

ctgcatgtcc tggcgctact cttgtaccag atataccaac ttccttctgg acactaaggg    14220

cagactctat cgttggcggt cgcccgttat catagaaaaa gggggtaagg ttgaggtcga    14280

aggtcatctg atcgacctca aaagagttgt gcttgatggt tccgtggcaa cccctttaac    14340

cagagtttca gcggaacaat ggggtcgtct ctagacgact tttgccatga tagcacggct    14400

ccacaaaagg tgcttttggc gttttccatt acctacacgc cagtaatgat atatgctcta    14460

aaggtaagtc gcggccgact gctagggctt ctgcaccttt tgatctttct gaattgtgct    14520

tttaccttcg ggtacatgac attcgcgcac tttcagagca caaatagggt cgcgctcgct    14580

atgggagcag tagttgcact tctttggggg gtgtactcag ccatagaaac ctggaaattc    14640

atcacctcca gatgccgttt gtgcttgcta ggccgcaagt acattctggc ccctgcccac    14700

cacgtcgaaa gtgccgcggg ctttcatccg attgcggcaa atgataacca cgcatttgtc    14760

gtccggcgtc ccggctccat tacggttaac ggcacattgg tgcccgggtt gaaaagcctc    14820

gtgttgggtg gcagaaaagc tgttaaacag ggagtggtaa accttgtcaa atatgccaaa    14880

taacaacggc aagcagcaaa agaaaaagaa ggggaatggc cagccagtca accagctgtg    14940

ccagatgctg ggtaaaatca tcgcccagca aaaccagtcc agaggcaagg gaccgggcaa    15000

gaaaagtaag aagaaaaacc cggagaagcc ccattttcct ctagcgaccg aagatgacgt    15060

caggcatcac ttcacccctg gtgagcggca attgtgtctg tcgtcgatcc agactgcctt    15120

taaccagggc gctggaactt gtaccctgtc agattcaggg aggataagtt acactgtgga    15180

gtttagtttg ccgacgcatc atactgtgcg cctgatccgc gtcacagcat caccctcagc    15240

atgatgggct ggcattcttt aggcacctca gtgtcagaat tggaagaatg tgtggtggat    15300

ggcactgatt gacattgtgc ctctaagtca cctattcaat tagggcgacc gtgtgggggt    15360

aaaatttaat tggcgagaac catgcggccg caattaaaaa aaaaaaaaaa aaaaaaaaaa    15420

aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa                                     15450


<210>  4
<211>  15444
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  P129-PK-d43/44 passage 34 complete genome (15,444 nt) 2 aa 
       deleted vaccine

<400>  4
atgacgtata ggtgttggct ctatgccacg gcatttgtat tgtcaggagc tgtgaccatt       60

ggcacagccc aaaacttgct gcacggaaaa cgcccttctg tgacagcctt cttcagggga      120

gcttaggggt ctgtccctag caccttgctt ctggagttgc actgctttac ggtctctcca      180

cccctttaac catgtctggg atacttgatc ggtgcacgtg cacccccaat gccagggtgt      240

ttatggcgga gggccaagtc tactgcacac gatgtctcag tgcacggtct ctccttcctc      300

tgaatctcca agttcctgag cttggggtgc tgggcctatt ttataggccc gaagagccac      360

tccggtggac gttgccacgt gcattcccca ctgtcgagtg ctcccctgcc ggggcctgct      420

ggctttctgc gatctttcca attgcacgaa tgaccagtgg aaacctgaac tttcaacaaa      480

gaatggtgcg ggttgcagct gagatttaca gagccggcca actcacccct gcagttttga      540

aggctctaca agtttatgaa cggggttgtc gctggtaccc cattgtcgga cctgtccctg      600

gagtggccgt ttacgccaac tccctacatg tgagtgacaa acctttcccg ggagcaactc      660

atgtgttaac caacctaccg ctcccgcaga ggcccaagcc tgaagacttt tgcccttttg      720

agtgtgctat ggctaacgtc tatgacattg gccataacgc cgtcatgtat gtggccagaa      780

ggaaagtctc ctgggcccct cgtggcgggg atgaagtgaa atttgaaacc gtccccgaag      840

agttgaagtt gattgcgaac cgactccaca tctccttccc gccccaccac gcagtggaca      900

tgtctgagtt tgccttcata gcccctggga gtggtgtctc cttgcgggtc gagcaccaac      960

acggctgcct tcccgctgat actgtccctg atgggaactg ctggtggtac ttgtttgact     1020

tgctcccacc ggaagttcag aataaagaaa ttcgccgtgc taaccaattt ggctatcaaa     1080

ccaagcatgg tgtccatggc aagtacctac agcggaggct gcaagttaat ggtctccgag     1140

cagtgactga tacagatgga cctattgtcg tacagtactt ctctgttagg gagagttgga     1200

tccgccactt cagactggcg gaagaaccta gcctccctgg gtttgaagac ctcctcagaa     1260

taagggtaga gcctaatacg tcgccaatgg gtggcaaggg tgaaaaaatc ttccggtttg     1320

gcagtcacaa gtggtacggt gctggaaaga gagcaaggag agcacgctct ggtgcgactg     1380

ccacggtcgc tcaccgcgct ttgcccgctc gcgaagccca gcaggccaag aagctcgagg     1440

ttgccagcgc caacagggct gagcatctca agtactattc cccgcctgcc gacgggaact     1500

gtggttggca ctgcatttcc gccattacca accggatggt gaattccaaa tttgaaacca     1560

ctcttcccga gagagtgaga ccttcagatg actgggctac tgacgaggat cttgtgaata     1620

ccatccaaat cctcaggctc cccgcggcct tggacaggaa cggtgcttgt gctggcgcca     1680

agtacgtgct caagctggaa ggtgagcact ggaccgtctc tgtgacccct gggatgaccc     1740

cttctttgct cccccttgaa tgtgttcagg gttgttgtga gcataagagc ggtcttggtt     1800

tcccagacgt ggtcgaagtt tccggatttg accctgcctg tcttgaccga cttgctgaga     1860

taatgcactt gcctagcagt gtcatcccag ctgctctggc cgagatgtcc gacgacttca     1920

atcgtctggc ttccccggcc gccactgtgt ggactgtttc gcaattcttt gcccgccaca     1980

gaggaggaga gcatcctgac caggtgtgct tagggaaaat tatcaacctt tgtcaggtga     2040

ttgaggaatg ctgctgttcc cggaacaaag ccaaccgggc taccccggaa gaggttgcgg     2100

caaaagttga ccagtacctc cgtggtgcag caagccttgg agaatgcttg gccaagcttg     2160

agagggctcg cccgccgagc gcgacggaca cctcctttga ttggaatgtt gtgcttcctg     2220

gggttgagac ggcgaatcag acaaccaaac agctccatgt caaccagtgc cgcgctctgg     2280

ttcctgtcgt gactcaagag cctttggaca gagactcggt ccctctgacc gccttctcgc     2340

tgtccaattg ctactaccct gcacaaggtg acgaggtccg tcaccgtgag aggctaaact     2400

ccttgctctc taagttggag ggggttgttc gtgaggaata tgggctcacg ccaactggac     2460

ctggcccgcg acccgcactg ccgaacgggc tcgacgagct taaagaccag atggaggagg     2520

atctgctgaa attagtcaac gcccaggcaa cttcagaaat gatggcctgg gcagccgagc     2580

aggttgatct aaaagcttgg gtcaaaaatt acccacggtg gacaccgcca ccccctccac     2640

caagagttca gcctcgaaaa acgaagtctg tcaagagctt gctagagaac aagcctgtcc     2700

ctgctccgcg caggaaggtc agatctgatt gtggcagccc gattttgatg ggcgacaatg     2760

ttcctaacgg ttgggaagat tcgactgttg gtggtcccct tgatctttcg gcaccatccg     2820

agccgatgac acctctgagt gagcctgtac ttatttccag gccagtgaca tctttgagtg     2880

tgccggcccc agttcctgca ccgcgtagag ctgtgtcccg accgatgacg ccctcgagtg     2940

agccaatttt tgtgtctgca ctgcgacaca aatttcagca ggtggaaaaa gcaaatctgg     3000

cggcagcagc gccgatgtgc caggacgaac ccttagattt gtctgcatcc tcacagactg     3060

aatatgaggc ttccccccta acaccaccgc agaacgtggg cattctggag gtaagggggc     3120

aagaagctga ggaagttctg agtgaaatct cggatattct gaatgatacc aaccctgcac     3180

ctgtgtcatc aagcagctcc ctgtcaagtg ttaagatcac acgcccaaaa tactcagctc     3240

aagccattat cgactcgggc gggccctgca gtgggcacct ccaaagggaa aaagaagcat     3300

gcctccgcat catgcgtgag gcttgtgatg cggccaagct tagtgaccct gccacgcagg     3360

aatggctttc tcgcatgtgg gatagggtgg acatgctgac ttggcgcaac acgtctgctt     3420

accaggcgtt tcgcacctta gatggcaggt ttgggtttct cccaaagatg atactcgaga     3480

cgccgccgcc ctacccgtgt gggtttgtga tgttgcctca cacccctgca ccttccgtga     3540

gtgcagagag cgaccttacc attggttcag tcgccactga agatattcca cgcgtcctcg     3600

ggaaaataga aaataccggt gagatgatca accagggacc cttggcatcc tctgaggaag     3660

aaccggtata caaccaacct gccaaagact cccggatatc gtcgcggggg tctgacgaga     3720

gcacagcagc cccgtccgcg ggtacaggtg gcgccggctt atttactgat ttgccacctt     3780

cagacggcgt agatgcggac ggtggggggc cgttgcagac ggtaagaaag aaagctgaaa     3840

ggctcttcga ccaattgagc cgtcaggttt ttaacctcgt ctcccatctc cctgttttct     3900

tctcacacct cttcaaatct gacagtggtt attctccggg tgattggggt tttgcagctt     3960

ttactctatt ttgcctcttt ttgtgttaca gctacccatt cttcggtttc gttcccctct     4020

tgggtgtatt ttctgggtct tctcggcgtg tgcgcatggg ggtttttggc tgctggctgg     4080

cttttgctgt tggcctgttc aagcctgtgt ccgacccagt cggcactgct tgtgagtttg     4140

actcgccaga gtgcaggaac gtccttcatt cttttgagct tctcaaacct tgggaccctg     4200

ttcgcagcct tgttgtgggc cccgtcggtc tcggtcttgc cattcttggc aggttactgg     4260

gcggggcacg ctacatctgg cattttttgc ttaggcttgg cattgttgca gattgtatct     4320

tggctggagc ttatgtgctt tctcaaggta ggtgtaaaaa gtgctgggga tcttgtataa     4380

gaactgctcc taatgaaatc gccttcaacg tgttcccttt tacacgtgcg accaggtcgt     4440

cactcatcga cctgtgcgat cggttttgtg cgccaacagg catggacccc attttcctcg     4500

ccactgggtg gcgtgggtgc tggaccggcc gaagtcccat tgagcaaccc tctgaaaaac     4560

ccatcgcgtt cgcccagttg gatgaaaaga ggattacggc tagaactgtg gtcgctcagc     4620

cttatgatcc taatcaagcc gtgaagtgct tgcgggtgtt acaggcgggt ggggcgatgg     4680

tggccgaggc agtcccaaaa gtggccaaag tttctgctat tccattccga gccccttttt     4740

ttcccaccgg agtgaaagtt gatcccgagt gcaggatcgt ggttgacccc gatactttta     4800

ctacagccct ccggtctggt tactctacca caaacctcgt ccttggtgtg ggggactttg     4860

cccagctgaa tggactaaag atcaggcaaa tttccaagcc ttcgggagga ggcccacacc     4920

tcattgctgc cctgcatgtt gcctgctcga tggcgttgca catgcttgct ggggtttatg     4980

taacttcagt ggggtcttgc ggtgccggca ccaacgatcc atggtgcact aatccgtttg     5040

ccgttcctgg ctacggacca ggctctctct gcacgtccag attgtgcatc tcccaacatg     5100

gccttaccct gcccttgaca gcacttgtgg cgggattcgg tcttcaggaa atcgccttgg     5160

tcgttttgat tttcgtttcc atcggaggca tggctcatag gttgagttgt aaggctgata     5220

tgctgtgcat tttacttgca atcgccagct atgtttgggt accccttacc tggttgcttt     5280

gtgtgtttcc ttgttggttg cgctggttct ctttgcaccc ccttaccatc ctatggttgg     5340

tgtttttctt gatttctgta aatatgcctt cgggaatctt ggccgtggtg ttattggttt     5400

ctctttggct tttgggacgt tatactaaca ttgctggtct tgtcaccccc tatgatattc     5460

atcattacac cagtggcccc cgcggtgttg ccgccttggc taccgcacca gatggaacct     5520

acttggctgc cgtccgccgc gctgcgttga ctggtcgcac catgctgttc accccgtctc     5580

agcttgggtc ccttcttgag ggcgctttca gaactcgaaa gccctcactg aacaccgtca     5640

atgtggttgg gtcctccatg ggctctggtg gagtgttcac catcgacggg aaaattaggt     5700

gcgtgactgc cgcacatgtc cttacgagta attcggctag ggtttccgga gtcggcttca     5760

atcaaatgct tgactttgat gtgaaagggg acttcgccat agctgattgc ccgaattggc     5820

aaggagctgc tcccaagacc caattctgcg aggacggatg gactggccgt gcctattggc     5880

tgacatcctc tggcgtcgaa cccggtgtta ttgggaatgg attcgccttc tgcttcaccg     5940

cgtgcggcga ttccgggtcc ccagtgatca ccgaagctgg tgagattgtc ggcgttcaca     6000

caggatcaaa taaacaagga ggtggcatcg tcacgcgccc ttcaggccag ttttgtaacg     6060

tggcacccat caagctgagc gaattaagtg aattctttgc tggacccaag gtcccgctcg     6120

gtgatgtgaa ggttggcagc cacataatta aagacacgtg cgaagtacct tcagatcttt     6180

gcgccttgct tgctgccaaa cctgaactgg agggaggcct ctccaccgtc caacttctgt     6240

gtgtgttttt cctactgtgg agaatgatgg gacatgcctg gacgcccttg gttgctgtgg     6300

ggtttttcat tctgaatgag gttctcccag ctgtcctggt tcggagtgtt ttctcctttg     6360

ggatgtttgt gctatcttgg ctcacaccat ggtctgcgca agttctgatg atcaggcttc     6420

taacagcagc tcttaacagg aacagatggt cacttgcctt ttacagcctt ggtgcggtga     6480

ccggttttgt cgcagatctt gcggtaactc aagggcaccc gttgcaggca gtgatgaatt     6540

tgagcaccta tgccttcctg cctcggatga tggttgtgac ctcaccagtc ccagtgattg     6600

cgtgtggtgt tgtgcaccta cttgccatca ttttgtactt gttcaagtac cgcggcctgc     6660

acaatgttct tgttggtgat ggagcgtttt ctgcagcttt cttcttgcga tactttgccg     6720

agggaaagtt gagggaaggg gtgtcgcaat cctgcggaat gaatcatgag tcattaactg     6780

gtgccctcgc tatgggactc aatgacgagg acttggactt ccttacgaaa tggactgatt     6840

ttaagtgctt tgtttctgcg tccaacatga ggaatgcagc aggccaattc atcgaggctg     6900

cctatgcaaa agcacttaga attgaacttg cccagttggt gcaggttgat aaggttcgag     6960

gtactttggc caagcttgag gcttttgctg ataccgtggc accccaactc tcgcccggtg     7020

acattgttgt tgctcttggc cacacgcctg ttggcagcat cttcgaccta aaggttggtg     7080

gtaccaagca tactctccaa gtcattgaga ccagagtcct tgccgggtcc aaaatgaccg     7140

tggcgcgcgt cgttgaccca acccccacgc ccccacccgc acccgtgccc atccccctcc     7200

caccgaaagt tctagagaat ggtcccaacg cctgggggga tggggaccgt ttgaataaga     7260

agaagaggcg taggatggaa accgtcggca tctttgtcat gggtgggaag aagtaccaga     7320

aattttggga caagaattcc ggtgatgtgt tttacgagga ggtccatgac aacacagatg     7380

cgtgggagtg cctcagagtt ggtgaccctg ccgactttaa ccctgagaag ggaactctgt     7440

gtgggcatac tactattgaa gataaggatt acaaagtcta cgcctcccca tctggcaaga     7500

agttcctggt ccccgtcaac ccagagagcg gaagagccca atgggaagct gcaaagcttt     7560

ccgtggagca ggcccttggc atgatgaatg tcgacggtga actgacggcc aaagaagtgg     7620

agaaactgaa aagaataatt gacaaacttc agggcctgac taaggagcag tgtttaaact     7680

gctagccgcc agcggcttga cccgctgtgg tcgcggcggc ttggttgtta ctgagacagc     7740

ggtaaaaata gtcaaatttc acaaccggac tttcacccta gggcctgtga atttaaaagt     7800

ggccagtgag gttgagctga aagacgcggt cgagcacaac caacacccgg ttgcaagacc     7860

ggttgacggt ggtgttgtgc tcctgcgttc cgcagttcct tcgcttatag atgtcctgat     7920

ctccggtgct gacgcatctc ctaagttact cgctcgtcac gggccgggga acactgggat     7980

cgatggcacg ctttgggact ttgaggccga ggccaccaaa gaggaaattg cgctcagtgc     8040

gcaaataata caggcttgtg acattaggcg cggtgacgca cctgaaattg gtctccctta     8100

caagctgtac cctgttaggg gcaaccctga gcgggtaaaa ggagttttac agaatacaag     8160

gtttggagac ataccttaca aaacccccag tgacactggg agcccagtgc acgcggctgc     8220

ctgcctcacg cccaatgcca ctccggtgac tgatgggcgc tccgtcttgg ctactaccat     8280

gccctccggt tttgaattgt atgtaccgac cattccagcg tctgtccttg attatcttga     8340

ctctaggcct gactgcccca aacagttgac agagcacggc tgtgaggatg ccgcattgag     8400

agacctctcc aagtatgact tgtccaccca aggctttgtt ttacctgggg ttcttcgcct     8460

tgtgcgtaag tacctgtttg cccacgtggg taagtgcccg cccgttcatc ggccttccac     8520

ttaccctgcc aagaattcta tggctggaat aaatgggaac aggtttccaa ccaaggacat     8580

tcagagcgtc cccgaaatcg acgttctgtg cgcacaggcc gtgcgagaaa actggcaaac     8640

tgttacccct tgtaccctca agaaacagta ttgtgggaag aagaagacta ggacaatact     8700

cggcaccaat aatttcattg cgttggccca ccgggcagcg ttgagtggtg tcacccaggg     8760

cttcatgaaa aaggcgttta actcgcccat cgccctcggg aaaaacaaat ttaaggagct     8820

acagactccg atcttaggca ggtgccttga agctgatctt gcatcctgtg atcgatccac     8880

acctgcaatt gtccgctggt ttgccgccaa ccttctttat gaacttgcct gtgctgaaga     8940

gcacctaccg tcgtacgtgc tgaactgctg ccatgaccta ttggtcacgc agtccggcgc     9000

agtgactaag aggggtggcc tgtcgtctgg cgacccgatc acttctgtgt ctaacaccat     9060

ttacagcttg gtgatatatg cacagcacat ggtgcttagt tactttaaaa gtggtcaccc     9120

tcatggcctt ctgttcctac aagaccagct gaagttcgag gacatgctca aagtccaacc     9180

cctgatcgtc tattcggacg acctcgtgct gtatgccgaa tctcccacca tgccgaacta     9240

ccactggtgg gtcgaacatc tgaatttgat gctgggtttt cagacggacc caaagaagac     9300

agccataacg gactcgccat catttctagg ctgtaggata ataaatggac gccagctagt     9360

ccccaaccgt gacaggatcc tcgcggccct cgcttaccat atgaaggcaa gcaatgtttc     9420

tgaatactac gccgcggcgg ctgcaatact catggacagc tgtgcttgtt tagagtatga     9480

tcctgaatgg tttgaagagc ttgtggttgg gatagcgcag tgcgcccgca aggacggcta     9540

cagctttccc ggcccgccgt tcttcttgtc catgtgggaa aaactcagat ccaatcatga     9600

ggggaagaag tccagaatgt gcgggtattg cggggccccg gctccgtacg ccactgcctg     9660

tggcctcgac gtctgtattt accacaccca cttccaccag cattgtccag tcacaatctg     9720

gtgtggccac ccggctggtt ctggttcttg tagtgagtgc aaaccccccc tagggaaagg     9780

cacaagccct ctagatgagg tgttagaaca agtcccgtat aagcctccac ggactgtaat     9840

catgcatgtg gagcagggtc tcacccctct tgacccaggc agataccaga ctcgccgcgg     9900

attagtctcc gttaggcgtg gcatcagagg aaatgaagtt gacctaccag acggtgatta     9960

tgctagcacc gccctactcc ccacttgtaa agagatcaac atggtcgctg tcgcctctaa    10020

tgtgttgcgc agcaggttca tcatcggtcc gcccggtgct gggaaaacat actggctcct    10080

tcagcaggtc caggatggtg atgtcattta cacaccgact caccagacca tgctcgacat    10140

gattagggct ttggggacgt gccggttcaa cgtcccagca ggtacaacgc tgcaattccc    10200

tgccccctcc cgtaccggcc cgtgggttcg catcctagcc ggcggttggt gtcctggtaa    10260

gaattccttc ctggatgaag cagcgtattg taatcacctt gatgtcttga ggctccttag    10320

caaaaccacc ctcacctgtc tgggagactt caaacaactc cacccagtgg gttttgattc    10380

tcattgctat gtttttgaca tcatgcctca gacccagttg aagaccatct ggagattcgg    10440

acagaacatc tgtgatgcca tccaaccaga ttacagggac aaacttgtgt ccatggtcaa    10500

cacaacccgt gtaacctacg tggaaaaacc tgtcaagtat gggcaagtcc tcacccctta    10560

ccacagggac cgagaggacg gcgccatcac aattgactcc agtcaaggcg ccacatttga    10620

tgtggtcaca ctgcatttgc ccactaaaga ttcactcaac aggcaaagag cccttgttgc    10680

tatcaccagg gcaagacatg ctatctttgt gtatgaccca cacaggcaat tgcagagcat    10740

gtttgatctt cctgcgaagg gcacacccgt caacctcgca gtgcaccgtg atgagcagct    10800

gatcgtactg gatagaaata ataaagaatg cacagttgct caggctctag gcaacggaga    10860

taaatttagg gccaccgaca agcgcgttgt agattctctc cgcgccattt gtgctgatct    10920

ggaagggtcg agctctccgc tccccaaggt cgcacacaac ttgggatttt atttctcacc    10980

tgatttgaca cagtttgcta aactcccggt agaccttgca ccccactggc ccgtggtgac    11040

aacccagaac aatgaaaagt ggccggatcg gctggttgcc agccttcgcc ctgtccataa    11100

gtatagccgt gcgtgcattg gtgccggcta tatggtgggc ccctcggtgt ttctaggcac    11160

ccctggggtc gtgtcatact acctcacaaa atttgtcaag ggcgaggctc aagtgcttcc    11220

ggagacagtc ttcagcaccg gccgaattga ggtggattgc cgggagtatc ttgatgacag    11280

ggagcgagaa gttgctgagt ccctcccaca tgccttcatt ggcgacgtca aaggcaccac    11340

cgttggggga tgtcatcatg tcacctccaa ataccttccg cgcttccttc ccaaggaatc    11400

agtcgcggta gtcggggttt cgagccccgg gaaagccgca aaagcagtgt gcacattgac    11460

ggatgtgtac ctcccagacc ttgaggccta cctccaccca gagactcagt ccaagtgctg    11520

gaaagttatg ttggacttca aggaagttcg actgatggtc tggaaagaca agacggccta    11580

tttccaactt gaaggccgct atttcacctg gtatcagctt gcaagctacg cctcgtacat    11640

ccgtgttcct gtcaactcca cggtgtatct ggacccctgc atgggccctg ccctttgcaa    11700

cagaagagtt gtcgggtcca cccattgggg agctgacctc gcagtcaccc cttatgatta    11760

cggtgctaaa atcatcttgt ctagcgctta ccatggtgaa atgcctcctg gatacaagat    11820

tctggcgtgc gcggagttct cgctcgacga cccagtcaag tacaaacaca cctggggttt    11880

tgaatcggat acagcgtatc tgtatgagtt caccggaaac ggtgaggact gggaggatta    11940

caatgatgcg tttcgtgcgc gccagaaagg gaaaatttat aaggccactg ctaccagcat    12000

gaagttttat tttcccccgg gccccgtcat tgaaccaact ttaggcctga attgaaatga    12060

aatggggtct atacaaagcc tcttcgacaa aattggccag ctttttgtgg atgctttcac    12120

ggaatttttg gtgtccattg ttgatatcat catatttttg gccattttgt ttggcttcac    12180

catcgccggt tggctggtgg tcttttgcat cagattggtt tgctccgcgg tattccgtgc    12240

gcgccctgcc attcaccctg agcaattaca gaagatccta tgaggccttt ctttctcagt    12300

gccgggtgga cattcccacc tggggggtaa aacacccttt ggggatgttt tggcaccata    12360

aggtgtcaac cctgattgat gaaatggtgt cgcgtcgaat gtaccgcatc atggaaaaag    12420

cagggcaagc tgcctggaaa caggtggtga gcgaggctac gctgtctcgc attagtagtt    12480

tggatgtggt ggctcatttt caacatcttg ccgccattga agccgagacc tgtaaatatt    12540

tggcttctcg actgcccatg ctacacaacc tgcgcatgac agggtcaaat gtaaccatag    12600

tgtataatag cactttaaat caggtgtttg ctatttttcc aacccctggt tcccggccaa    12660

agcttcatga ttttcagcaa tggctaatag ctgtacattc ctccatattt tcctctgttg    12720

cagcttcttg tactcttttt gttgtgctgt ggttgcgggt tccaatgcta cgtactgttt    12780

ttggtttccg ctggttaggg gcaatttttc tttcgaactc atggtgaatt acacggtgtg    12840

tccaccttgc ctcacccgac aagcagccgc tgaggtcctt gaacccggta ggtctctttg    12900

gtgcaggata gggcatgacc gatgtgggga ggacgatcac gacgaactgg ggttcatggt    12960

tccgcctggc ctctccagcg aaagccactt gaccagtgtt tacgcctggt tggcgttcct    13020

gtccttcagc tacacggccc agttccatcc cgagatattt gggataggga acgtgagtga    13080

agtttatgtt gacatcaagc accaattcat ctgcgccgtt catgacgggc agaacaccac    13140

cttgcctcgc catgacaata tttcagccgt atttcagacc tactatcaac atcaggtcga    13200

cggcggcaat tggtttcacc tagaatggct gcgtcccttc ttttcctctt ggttggtttt    13260

aaatgtttcg tggtttctca ggcgttcgcc tgcaagccat gtttcagttc gagtctttca    13320

gacatcaaaa ccaacactac cgcagcatca ggctttgttg tcctccagga catcagctgc    13380

cttaggcatg gcgactcgtc ctttccgacg attcgcaaaa gctctcaatg ccgcacggcg    13440

atagggacac ctgtgtatat caccatcaca gccaatgtga cagatgagaa ttacttacat    13500

tcttctgatc tcctcatgct ttcttcttgc cttttctatg cttctgagat gagtgaaaag    13560

ggattcaagg tggtatttgg caatgtgtca ggcatcgtgg ctgtgtgtgt caactttacc    13620

agctacgtcc aacatgtcaa agagtttacc caacgctcct tggtggtcga tcatgtgcgg    13680

ctgcttcatt tcatgacacc tgagaccatg aggtgggcaa ccgttttagc ctgtcttttt    13740

gccatcctac tggcaatttg aatgttcaag tatgttgggg aaatgcttga ccgcgggctg    13800

ttgctcgcga ttgctttctt tgtggtgtat cgtgccgttc tggtttgctg tgctcggcaa    13860

cgccaacagc agcagcagct ctcattttca gttgatttat aacttgacgc tatgtgagct    13920

gaatggcaca gattggctgg caggaaaatt tgattgggca gtggagactt ttgtcatctt    13980

tcccgtgttg actcacattg tttcctatgg tgcactcacc accagccatt tccttgacac    14040

agttggtctg gttactgtgt ccaccgccgg gttttatcac gggcggtatg tcttgagtag    14100

catctacgcg gtctgtgctc tggctgcgtt gatttgcttc gttattaggc ttgcgaagaa    14160

ctgcatgtcc tggcgctact cttgtaccag atataccaac ttccttctgg acactaaggg    14220

cagactctat cgttggcggt cgcccgttat catagaaaaa gggggtaagg ttgaggtcga    14280

aggtcatctg atcgacctca aaagagttgt gcttgatggt tccgtggcaa cccctttaac    14340

cagagtttca gcggaacaat ggggtcgtct ctagacgact tttgccatga tagcacggct    14400

ccacaaaagg tgcttttggc gttttccatt acctacacgc cagtaatgat atatgctcta    14460

aaggtaagtc gcggccgact gctagggctt ctgcaccttt tgatctttct gaattgtgct    14520

tttaccttcg ggtacatgac attcgcgcac tttcagagca caaatagggt cgcgctcgct    14580

atgggagcag tagttgcact tctttggggg gtgtactcag ccatagaaac ctggaaattc    14640

atcacctcca gatgccgttt gtgcttgcta ggccgcaagt acattctggc ccctgcccac    14700

cacgtcgaaa gtgccgcggg ctttcatccg attgcggcaa atgataacca cgcatttgtc    14760

gtccggcgtc ccggctccat tacggttaac ggcacattgg tgcccgggtt gaaaagcctc    14820

gtgttgggtg gcagaaaagc tgttaaacgg ggagtggtaa accttgtcaa atatgccaaa    14880

taacaacggc aagcagcaaa agaaaaagaa ggggaatggc cagccagtca accagctgtg    14940

ccagatgctg ggtaaaatca tcgcccagca aaaccagtcc agaggcaagg gaccgggctc    15000

taagaagaaa tccccggaga agccccattt tcctctagcg accgaagatg acgtcaggca    15060

tcacttcacc cctggtgagc ggcaattgtg tctgtcgtcg atccagactg cctttaacca    15120

gggcgctgga acttgtaccc tgtcagattc agggaggata agttacactg tggagtttag    15180

tttgccgacg catcatactg tgcgcctgat ccgcgtcaca gcatcaccct cagcatgatg    15240

ggctggcatt ctttaggcac ctcagtgtca gaattggaag aatgtgtggt ggatggcact    15300

gattgacatt gtgcctctaa gtcacctatt caattagggc gaccgtgtgg gggtaaaatt    15360

taattggcga gaaccatgcg gccgcaatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa    15420

aaaaaaaaaa aaaaaaaaaa aaaa                                           15444


<210>  5
<211>  15450
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  P129 passage 0 complete genome (15,450 nt) full length parental 
       virus

<400>  5
atgacgtata ggtgttggct ctatgccacg gcatttgtat tgtcaggagc tgtgaccatt       60

ggcacagccc aaaacttgct gcacggaaaa cgcccttctg tgacagcctt cttcagggga      120

gcttaggggt ctgtccctag caccttgctt ctggagttgc actgctttac ggtctctcca      180

cccctttaac catgtctggg atacttgatc ggtgcacgtg cacccccaat gccagggtgt      240

ttatggcgga gggccaagtc tactgcacac gatgtctcag tgcacggtct ctccttcctc      300

tgaatctcca agttcctgag cttggggtgc tgggcctatt ttataggccc gaagagccac      360

tccggtggac gttgccacgt gcattcccca ctgtcgagtg ctcccccgcc ggggcctgct      420

ggctttctgc gatctttcca attgcacgaa tgaccagtgg aaacctgaac tttcaacaaa      480

gaatggtgcg ggttgcagct gagatttaca gagccggcca actcacccct gcagttttga      540

aggctctaca agtttatgaa cggggttgtc gctggtaccc cattgtcgga cctgtccctg      600

gagtggccgt tcacgccaac tccctacatg tgagtgacaa acctttcccg ggagcaactc      660

atgtgttaac caacctaccg ctcccgcaga ggcccaagcc tgaagacttt tgcccttttg      720

agtgtgctat ggctgacgtc tatgacatta gccatgacgc cgtcatgtat gtggccagag      780

ggaaagtctc ctgggcccct cgtggcgggg atgaagtgaa atttgaaacc gtccccgaag      840

agttgaagtt gattgcgaac cgactccaca tctccttccc gccccaccac gcagtggaca      900

tgtctgagtt tgccttcata gcccctggga gtggtgtctc cttgcgggtc gagcaccaac      960

acggctgcct tcccgctgat actgtccctg aagggaactg ctggtggtgc ttgtttgact     1020

tgctcccacc ggaagttcag aataaagaaa ttcgccgtgc taaccaattt ggctatcaaa     1080

ccaagcatgg tgtccctggc aagtacctac agcggaggct gcaagttaat ggtctccgag     1140

cagtgactga tacagatgga cctattgtcg tacagtactt ctctgttagg gagagttgga     1200

tccgccactt cagactggcg gaagaaccta gcctccctgg gtttgaagac ctcctcagaa     1260

taagggtaga gcctaatacg tcgccattgg gtggcaaggg tgaaaaaatc ttccggtttg     1320

gcagtcacaa gtggtacggt gctggaaaga gagcaaggag agcacgctct ggtgcgactg     1380

ccacggtcgc tcaccgcgct ttgcccgctc gcgaagccca gcaggccaag aagctcgagg     1440

ttgccagcgc caacagggct gagcatctca agtactattc cccgcctgcc gacgggaact     1500

gtggttggca ctgcatttcc gccattacca accggatggt gaattccaaa tttgaaacca     1560

ctcttcccga gagagtgaga ccttcagatg actgggctac tgacgaggat cttgtgaatg     1620

ccatccaaat cctcaggctc cccgcggcct tggacaggaa cggtgcttgt gctggcgcca     1680

agtacgtgct caagctggaa ggtgagcact ggaccgtctc tgtgacccct gggatgaccc     1740

cttctttgct cccccttgaa tgtgttcagg gttgttgtga gcatacgagc ggccttggtt     1800

tcccagatgt ggtcgaagtt tccggatttg accctgcctg ccttgaccga cttgctgaga     1860

taatgcactt gcctagcagt gtcatcccag ctgctctggc cgagatgtcc gacgacttca     1920

atcgtctggc ttccccggcc gccactgtgt ggactgtttc gcaattcttt gcccgccaca     1980

gaggaggaga gcatcctgac caggtgtgct tagggaaaat tatcaacctt tgtcaggtga     2040

ttgaggaatg ctgctgttcc cggaacaaag ccaaccgggc taccccggaa gaggttgcgg     2100

caaaaattga ccagtacctc cgtggtgcag caagccttgg agaatgcttg gccaagcttg     2160

agatggctcg cccgccgagc gcgatggaca cctcctttga ttggaatgtt gtgcttcctg     2220

gggttgagac ggcgaatcag acaaccaaac agctccatgt caaccagtgc cgcgctctgg     2280

ttcctgtcgt gactcaagag cctttggaca gagactcagt ccctctgacc gccttctcgc     2340

tgtccaattg ctactaccct gcacaaggtg acgaggtccg tcaccgtgag aggctaaact     2400

ccgtgctctc taagttggag ggggttgttc gtgaggaata tgggctcacg ccaactggac     2460

ctggcccgcg acccgcactg ccgaacgggc tcgacgagct taaagaccag atggaggagg     2520

atctgctgaa attagtcaac gcccaggcaa cttcagaaat gatggcctgg gcagccgagc     2580

aggttgatct gaaagcttgg gtcaaaaatt acccacggtg gacaccgcca ccccctccac     2640

caagagttca gcctcgaaaa acgaagtctg tcaagagctt gctagagaac aagcctgtcc     2700

ctgctccgcg caggaaggtc agatctgatt gtggcagccc gattttgatg ggcgacaatg     2760

ttcctaacgg ttgggaagat tcgactgttg gtggtcccct tgacctttcg gcaccatccg     2820

agccgatgac acctctgagt gagcctgtac ttatttccag gccagtgaca tctttgagtg     2880

tgccggcccc agttcctgca ccgcgtagag ctgtgtcccg accgatgacg ccctcgagtg     2940

agccaatttt tgtgtctgca ctgcgacaca aatttcagca ggtggaaaaa gcaaatctgg     3000

cggcagcagc gccgatgtac caggacgaac ccttagattt gtctgcatcc tcacagactg     3060

aatatgaggc ttctccccta acaccaccgc agaacgtggg cattctggag gtaagggggc     3120

aagaagctga ggaagttctg agtgaaatct cggatattct gaatgacacc aaccctgcac     3180

ctgtgtcatc aagcagctcc ctgtcaagtg ttaggatcac acgcccaaaa tactcagctc     3240

aagccattat cgactcgggc gggccctgca gtgggcacct ccaaagggaa aaagaagcat     3300

gcctccgcat catgcgtgag gcttgtgatg cggccaagct tagtgaccct gccacgcagg     3360

aatggctttc tcgcatgtgg gatagggtgg acatgctgac ttggcgcaac acgtctgctt     3420

accaggcgtt tcgcacctta gatggcaggt ttgggtttct cccaaagatg atactcgaga     3480

cgccgccgcc ctacccgtgt gggtttgtga tgttgcctca cacccctgca ccttccgtga     3540

gtgcagagag cgaccttacc atcggttcag tcgccactga agatattcca cgcatcctcg     3600

ggaaaataga aaataccggt gagatgatca accagggacc cttggcatcc tctgaggaag     3660

aaccggtata caaccaacct gccaaagact cccggatatc gtcgcggggg tctgacgaga     3720

gcacagcagc tccgtccgca ggtacaggtg gcgccggctt atttactgat ttgccacctt     3780

cagacggcgt agatgcggac ggtggggggc cgttgcagac ggtaagaaag aaagctgaaa     3840

ggctcttcga ccaattgagc cgtcaggttt ttaacctcgt ctcccatctc cctgttttct     3900

tctcacacct cttcaaatct gacagtggtt attctccggg tgattggggt tttgcagctt     3960

ttactctatt ttgcctcttt ttgtgttaca gctacccatt cttcggtttc gttcccctct     4020

tgggtgtatt ttctgggtct tctcggcgtg tgcgcatggg ggtttttggc tgctggctgg     4080

cttttgctgt tggcctgttc aagcctgtgt ccgacccagt cggcactgct tgtgagtttg     4140

actcgccaga gtgtaggaac gtccttcatt cttttgagct tctcaaacct tgggaccctg     4200

ttcgcagcct tgttgtgggc cccgtcggtc tcggtcttgc cattcttggc aggttactgg     4260

gcggggcacg ctacatctgg cattttttgc ttaggcttgg cattgttgca gattgtatct     4320

tggctggagc ttatgtgctt tctcaaggta ggtgtaaaaa gtgctgggga tcttgtataa     4380

gaactgctcc taatgaaatc gccttcaacg tgttcccttt tacacgtgcg accaggtcgt     4440

cactcatcga cctgtgcgat cggttttgtg cgccaaaagg catggacccc attttcctcg     4500

ccactgggtg gcgtgggtgc tggaccggcc gaagtcccat tgagcaaccc tctgaaaaac     4560

ccatcgcgtt cgcccagttg gatgaaaaga ggattacggc tagaactgtg gtcgctcagc     4620

cttatgatcc taatcaagcc gtaaagtgct tgcgggtgtt acaggcgggt ggggcgatgg     4680

tggccgaggc agtcccaaaa gtggtcaaag tttctgctat tccattccga gccccctttt     4740

ttcccaccgg agtgaaagtt gatcccgagt gcaggatcgt ggttgacccc gatactttta     4800

ctacagccct ccggtctggt tactctacca caaacctcgt ccttggtgtg ggggactttg     4860

cccagctgaa tggactaaag atcaggcaaa tttccaagcc ttcgggagga ggcccacacc     4920

tcattgctgc cctgcatgtt gcctgctcga tggcgttgca catgcttgct ggggtttatg     4980

taacttcagt ggggtcttgc ggtgccggca ccaacgatcc atggtgcact aatccgtttg     5040

ccgttcctgg ctacggacca ggctctctct gcacgtccag attgtgcatc tcccaacatg     5100

gccttaccct gcccttgaca gcacttgtgg cgggattcgg tcttcaggaa atcgccttgg     5160

tcgttttgat tttcgtttcc atcggaggca tggctcatag gttgagttgt aaggctgata     5220

tgctgtgcat cttacttgca atcgccagct atgtttgggt accccttacc tggttgcttt     5280

gtgtgtttcc ttgttggttg cgctggttct ctttgcaccc cctcaccatc ctatggttgg     5340

tgtttttctt gatttctgta aatatgcctt cgggaatctt ggccgtggtg ttgttggttt     5400

ctctttggct tttgggacgt tatactaaca ttgctggtct tgtcaccccc tatgatattc     5460

atcattacac cagtggcccc cgcggtgttg ccgccttagc taccgcacca gatggaacct     5520

acttggctgc cgtccgccgc gctgcgttga ctggtcgcac catgctgttc accccgtctc     5580

agcttgggtc ccttcttgag ggcgctttca gaactcgaaa gccctcactg aacaccgtca     5640

atgtggttgg gtcctccatg ggctctggtg gagtgttcac catcgacggg aaaattaggt     5700

gcgtgactgc cgcacatgtc cttacgggta attcggctag ggtttccgga gtcggcttca     5760

atcaaatgct tgactttgat gtgaaagggg acttcgccat agctgattgc ccgaattggc     5820

aaggagctgc tcccaagacc caattctgcg cggatggatg gactggccgt gcctattggc     5880

tgacatcctc tggcgtcgaa cccggtgtca ttgggagtgg attcgccttc tgcttcaccg     5940

cgtgcggcga ttccgggtcc ccagtgatca ccgaagctgg tgagcttgtc ggcgttcaca     6000

caggatcaaa taaacaagga ggtggcatcg tcacgcgccc ttcaggccag ttttgtaacg     6060

tggcacccat caagctgagc gaattaagtg aattctttgc tggacccaag gtcccgctcg     6120

gtgatgtgaa ggttggcagc cacataatta aagacacgtg cgaagtacct tcagatcttt     6180

gcgccttgct tgctgccaaa cctgaactgg agggaggcct ctccaccgtc caacttctgt     6240

gtgtgttttt cctactgtgg agaatgatgg gacatgcctg gacgcccttg gttgctgtgg     6300

ggtttttcat tctgaatgag gttctcccag ctgtcctggt tcggagtgtt ttctcctttg     6360

ggatgtttgt gctatcttgg ctcacaccat ggtctgcgca agttctgatg atcaggcttc     6420

taacagcagc tcttaacagg aacagatggt cacttgcctt ttacagcctt ggtgcggtga     6480

ccggttttgt cgcagatctt gcggcaactc aagggcaccc gttgcaggca gtaatgaatt     6540

tgagcaccta tgccttcctg cctcggatga tggttgtgac ctcaccagtc ccagtgattg     6600

cgtgtggtgt tgtgcaccta cttgccatca ttttgtactt gtttaagtac cgtggcctgc     6660

acaatgttct tgttggtgat ggagcgtttt ctgcagcttt cttcttgcga tactttgccg     6720

agggaaagtt gagggaaggg gtgtcgcaat cctgcggaat gaatcatgag tcattgactg     6780

gtgccctcgc tatgagactc aatgacgagg acttggactt ccttacgaaa tggactgatt     6840

ttaagtgctt tgtttctgcg tccaacatga ggaatgcagc aggccaattc atcgaggctg     6900

cctatgcaaa agcacttaga attgaacttg cccagttggt gcaggttgat aaggttcgag     6960

gtactttggc caagcttgag gcttttgctg ataccgtggc accccaactc tcgcccggtg     7020

acattgttgt tgctcttggc catacgcctg ttggcagcat cttcgaccta aaggttggtg     7080

gtaccaagca tactctccaa gtcattgaga ccagagtcct tgccgggtcc aaaatgaccg     7140

tggcgcgcgt cgttgaccca acccccacgc ccccacccgc acccgtgccc atccccctcc     7200

caccgaaagt tctagagaat ggtcccaacg cctgggggga tggggaccgt ttgaataaga     7260

agaagaggcg taggatggaa accgtcggca tctttgtcat gggtgggaag aagtaccaga     7320

aattttggga caagaattcc ggtgatgtgt tttacgagga ggtccatgac aacacagatg     7380

cgtgggagtg cctcagagtt ggtgaccctg ccgactttga ccctgagaag ggaactctgt     7440

gtgggcatac tactattgaa gataaggatt acaaagtcta cgcctcccca tctggcaaga     7500

agttcctggt ccccgtcaac ccagagagcg gaagagccca atgggaagct gcaaagcttt     7560

ccgtggagca ggcccttggc atgatgaatg tcgacggtga actgacggcc aaagaagtgg     7620

agaaactgaa aagaataatt gacaaacttc agggcctgac taaggagcag tgtttaaact     7680

gctagccgcc agcggcttga cccgctgtgg tcgcggcggc ttggttgtta ctgagacagc     7740

ggtaaaaata gtcaaatttc acaaccggac tttcacccta gggcctgtga atttaaaagt     7800

ggccagtgag gttgagctga aagacgcggt cgagcacaac caacacccgg ttgcaagacc     7860

ggttgacggt ggtgttgtgc tcctgcgttc cgcagttcct tcgcttatag atgtcctgat     7920

ctccggtgct gacgcatctc ctaagttact cgctcgtcac gggccgggga acactgggat     7980

cgatggcacg ctttgggact ttgaggccga ggccaccaaa gaggaaattg cactcagtgc     8040

gcaaataata caggcttgtg acattaggcg cggcgacgca cctgaaattg gtctccctta     8100

caagctgtac cctgttaggg gcaaccctga gcgggtaaaa ggagttttac agaatacaag     8160

gtttggagac ataccttaca aaacccccag tgacactgga agcccagtgc acgcggctgc     8220

ctgcctcacg cccaatgcca ctccggtgac tgatgggcgc tccgtcttgg ctactaccat     8280

gccctccggt tttgaattgt atgtaccgac cattccagcg tctgtccttg attatcttga     8340

ctctaggcct gactgcccca aacagttgac agagcacggc tgtgaggatg ccgcattgag     8400

agacctctcc aagtatgact tgtccaccca aggctttgtt ttacctgggg ttcttcgcct     8460

tgtgcgtaag tacctgtttg cccacgtggg taagtgcccg cccgttcatc ggccttccac     8520

ttaccctgcc aagaattcta tggctggaat aaatgggaac aggtttccaa ccaaggacat     8580

tcagagcgtc cctgaaatcg acgttctgtg cgcacaggcc gtgcgagaaa actggcaaac     8640

tgttacccct tgtaccctca agaaacagta ttgtgggaag aagaagacta ggacaatact     8700

cggcaccaat aatttcattg cgttggccca ccgggcagcg ttgagtggtg tcacccaggg     8760

cttcatgaaa aaggcgttta actcgcccat cgccctcggg aaaaacaaat ttaaggagct     8820

acagactccg gtcttaggca ggtgccttga agctgatctt gcatcctgtg atcgatccac     8880

acctgcaatt gtccgctggt ttgccgccaa tcttctttat gaacttgcct gtgctgaaga     8940

gcacctaccg tcgtacgtgc tgaactgctg ccatgaccta ttggtcacgc agtccggcgc     9000

agtgactaag aggggtggcc tgtcgtctgg cgacccgatc acttctgtgt ctaacaccat     9060

ttacagcttg gtgatatatg cacagcacat ggtgcttagt tactttaaaa gtggtcaccc     9120

tcatggcctt ctgttcctac aagaccagct gaagttcgaa gacatgctca aagtccaacc     9180

cctgatcgtc tattcggacg acctcgtgct gtatgccgaa tctcccacca tgccgaacta     9240

ccactggtgg gtcgaacatc tgaatttgat gctgggtttt cagacggacc caaagaagac     9300

agccataacg gactcgccat catttctagg ctgtaggata ataaatggac gccagctagt     9360

ccccaaccgt gacaggatcc tcgcggccct cgcttaccat atgaaggcaa gcaatgtttc     9420

tgaatactac gccgcggcgg ctgcaatact catggacagc tgtgcttgtt tagagtatga     9480

tcctgaatgg tttgaagagc ttgtggttgg gatagcgcag tgcgcccgca aggacggcta     9540

cagctttccc ggcccgccgt tcttcttatc catgtgggaa aaactcagat ccaatcatga     9600

ggggaagaag tccagaatgt gcgggtattg cggggccccg gctccgtacg ccactgcctg     9660

tggcctcgac gtctgtattt accacaccca cttccaccag cattgtccag tcataatctg     9720

gtgtggccac ccggctggtt ctggttcttg tagtgagtgc aaaccccccc tagggaaagg     9780

cacaagccct ctagatgagg tgttagaaca agtcccgtat aagcctccac ggactgtaat     9840

catgcatgtg gagcagggtc tcacccctct tgacccaggc agataccaga ctcgccgcgg     9900

attagtctcc gttaggcgtg gcatcagagg aaatgaagtt gacctaccag acggtgatta     9960

tgctagcacc gccctactcc ccacttgtaa agagatcaac atggtcgctg tcgcctctaa    10020

tgtgttgcgc agcaggttca tcatcggtcc gcccggtgct gggaaaacat actggctcct    10080

tcagcaggtc caggatggtg atgtcattta cacaccgact caccagacca tgctcgacat    10140

gattagggct ttggggacgt gccggttcaa cgtcccagca ggtacaacgc tgcaattccc    10200

tgccccctcc cgtaccggcc cgtgggttcg catcctagcc ggcggttggt gtcctggtaa    10260

gaattccttc ctggatgaag cagcgtattg taatcacctt gatgtcttga ggctccttag    10320

caaaaccacc ctcacctgtc tgggagactt caaacaactc cacccagtgg gttttgattc    10380

tcattgctat gtttttgaca tcatgcctca gacccagttg aagaccatct ggagattcgg    10440

acagaacatc tgtgatgcca tccaaccaga ttacagggac aaacttgtgt ccatggtcaa    10500

cacaacccgt gtaacctacg tggaaaaacc tgtcaagtat gggcaagtcc tcacccctta    10560

ccacagggac cgagaggacg gcgccatcac aattgactcc agtcaaggcg ccacatttga    10620

tgtggttaca ctgcatttgc ccactaaaga ttcactcaac aggcaaagag cccttgttgc    10680

tatcaccagg gcaagacatg ctatctttgt gtatgaccca cacaggcaat tgcagagcat    10740

gtttgatctt cctgcgaagg gcacacccgt caacctcgca gtgcaccgtg atgagcagct    10800

gatcgtactg gatagaaata ataaagaatg cacagttgct caggctctag gcaacggaga    10860

taaatttagg gccaccgaca agcgcgttgt agattctctc cgcgccattt gtgctgatct    10920

ggaagggtcg agctctccgc tccccaaggt cgcacacaac ttgggatttt atttctcacc    10980

tgatttgaca cagtttgcta aactcccggt agaccttgca ccccactggc ccgtggtgac    11040

aacccagaac aatgaaaagt ggccggatcg gctggttgcc agccttcgcc ctgtccataa    11100

gtatagccgt gcgtgcattg gtgccggcta tatggtgggc ccctcggtgt ttctaggcac    11160

ccctggggtc gtgtcatact acctcacaaa atttgtcaag ggcgaggctc aagtgcttcc    11220

ggagacagtc ttcagcaccg gccgaattga ggtggattgc cgggggtatc ttgatgacag    11280

ggagcgagaa gttgctgagt ccctcccaca tgccttcatt ggcgacgtca aaggcaccac    11340

cgttggggga tgtcatcatg tcacctccaa ataccttccg cgcttccttc ccaaggaatc    11400

agtcgcggta gtcggggttt cgagccccgg gaaagccgca aaagcagtgt gcacattgac    11460

ggatgtgtac ctcccagacc ttgaggccta cctccaccca gagactcagt ctaagtgctg    11520

gaaagttatg ttggacttca aggaagttcg actgatggtc tggaaagaca agacggccta    11580

tttccaactt gaaggccgct atttcacctg gtatcagctt gcaagctacg cctcgtacat    11640

ccgtgttcct gtcaactcca cggtgtatct ggacccctgc atgggccctg ccctttgcaa    11700

cagaagagtt gtcgggtcca cccattgggg agctgacctc gcagtcaccc cttatgatta    11760

cggtgctaaa atcatcttgt ctagcgctta ccatggtgaa atgcctcctg gatacaagat    11820

tctggcgtgc gcggagttct cgctcgacga cccagtcaag tacaaacaca cctggggttt    11880

tgaatcggat acagcgtatc tgtatgagtt catcggaaac ggtgaggact gggaggatta    11940

caatgatgcg tttcgtgcgc gccagaaagg gaaaatttat aaggccactg ctaccagcat    12000

gaagttttat tttcccccgg gccccgtcat tgaaccaact ttaggcctga attgaaatga    12060

aatggggtct atacaaagcc tcttcgacaa aattggccag ctttttgtgg atgctttcac    12120

ggaatttttg gtgtccattg ttgatatcat catatttttg gccattttgt ttggcttcac    12180

catcgccggt tggctggtgg tcttttgcat cagattggtt tgctccgcgg tattccgtgc    12240

gcgccctgcc attcaccctg agcaattaca gaagatccta tgaggccttt ctttctcagt    12300

gccgggtgga cattcccacc tggggggtaa aacacccttt ggggatgttt tggcaccata    12360

aggtgtcaac cctgattgat gaaatggtgt cgcgtcgaat gtaccgcatc atggaaaaag    12420

cagggcaagc tgcctggaaa caggtggtga gcgaggctac gctgtctcgc attagtagtt    12480

tggatgaggt ggctcatttt caacatcttg ccgccattga agccgagacc tgtaaatatt    12540

tggcttctcg actgcccatg ctacacaacc tgcgcatgac agggtcaaat gtaaccatag    12600

tgtataatag cactttaaat caggtgtttg ctatttttcc aacccctggt tcccggccaa    12660

agcttcatga ttttcagcaa tggctaatag ctgtacattc ctccatattt tcctctgttg    12720

cagcttcttg tactcttttt gttgtgctgt ggttgcgggt tccaatgcta cgtactgttt    12780

ttggtttccg ctggttaggg gcaatttttc tttcgaactc atggtgaatt acacggtgtg    12840

tccaccttgc ctcacccgac aagcagccgc tgaggccctt gaacccggta ggtctctttg    12900

gtgcaggata gggcatgacc gatgtgggga ggacgatcac gacgaactag ggttcatggt    12960

tccgcctggc ctctccagcg aaagccactt gaccagtgtt tacgcctggt tggcgttcct    13020

gtccttcagc tacacggccc agttccatcc cgagatattt gggataggga acgtgagtga    13080

agtttatgtt gacatcaagc accaattcat ctgcgccgtt catgacgggc agaacaccac    13140

cttgcctcgc catgacaata tttcagccgt atttcagacc tactatcaac atcaggtcga    13200

cggcggcaat tggtttcacc tagaatggct gcgtcccttc ttttcctctt ggttggtttt    13260

aaatgtttcg tggtttctca ggcgttcgcc tgcaagccat gtttcagttc gagtctttca    13320

gacatcaaaa ccaacactac cgcagcatca ggctttgttg tcctccagga catcagctgc    13380

cttaggcatg gcgactcgtc ctttccgacg attcgcaaaa gctctcaatg ccgcacggcg    13440

atagggacac ctgtgtatat caccatcaca gccaatgtga cagatgagaa ttacttacat    13500

tcttctgatc tcctcatgct ttcttcttgc cttttctatg cttctgagat gagtgaaaag    13560

ggattcaagg tggtgtttgg caatgtgtca ggcatcgtgg ctgtgtgtgt caactttacc    13620

agctacgtcc aacatgtcaa agagtttacc caacgctcct tggtggtcga tcatgtgcgg    13680

ctgcttcatt tcatgacacc tgagaccatg aggtgggcaa ccgttttagc ctgtcttttt    13740

gccatcctac tggcaatttg aatgttcaag tatgttgggg aaatgcttga ccgcgggctg    13800

ttgctcgcga ttgctttctt tgtggtgtat cgtgccgttc tggtttgctg tgctcgtcaa    13860

cgccaacaac accagcagct ctcattttca gttgatttat aacttgacgc tatgtgagct    13920

gaatggcaca gattggctgg cagaaaaatt tgattgggca gtggagactt ttgtcatctt    13980

tcccgtgttg actcacattg tttcctatgg tgcactcacc accagccatt tccttgacac    14040

agttggtctg gttactgtgt ccaccgccgg gttttatcac gggcggtatg tcttgagtag    14100

cgtctacgcg gtctgtgctc tggctgcgtt gatttgcttc gtcattaggc ttgcgaagaa    14160

ctgcatgtcc tggcgctact cttgtaccag atataccaac ttccttctgg acactaaggg    14220

cagactctat cgttggcggt cgcccgttat catagagaaa gggggtaagg ttgaggtcga    14280

aggtcacctg atcgacctca aaagagttgt gcttgatggt tccgtggcaa cccctttaac    14340

cagagtttca gcggaacaat ggggtcgtct ctagacgatt tttgccatga tagcacggct    14400

ccacaaaagg tgcttttggc gttttccatt acctacacgc cagtaatgat atatgctcta    14460

aaggtaagtc gcggccgact gctagggctt ctgcaccttt tgatctttct gaattgtgct    14520

tttaccttcg ggtacatgac attcgtgcac tttcagagca caaatagggt cgcgctcact    14580

atgggagcag tagttgcact tctttggggg gtgtactcag ccatagaaac ctggaaattc    14640

atcacctcca gatgccgttt gtgcttgcta ggccgcaagt acattctggc ccctgcccac    14700

cacgtcgaaa gtgccgcggg ctttcatccg attgcggcaa atgataacca cgcatttgtc    14760

gtccggcgtc ccggctccac tacggttaac ggcacattgg tgcccgggtt gaaaagcctc    14820

gtgttgggtg gcagaaaagc tgttaaacag ggagtggtaa accttgtcaa atatgccaaa    14880

taacaacggc aagcagcaaa agaaaaagaa ggggaatggc cagccagtca atcagctgtg    14940

ccagatgctg ggtaaaatca tcgcccagca aagccagtcc agaggcaagg gaccgggcaa    15000

gaaaagtaag aagaaaaacc cggagaagcc ccattttcct ctagcgaccg aagatgacgt    15060

caggcatcac ttcacccctg gtgagcggca attgtgtctg tcgtcgatcc agactgcctt    15120

taatcagggc gctggaactt gtaccctgtc agattcaggg aggataagtt acactgtgga    15180

gtttagtttg ccgacgcatc atactgtgcg cctgatccgc gtcacagcat caccctcagc    15240

atgatgggct ggcattcttt aggcacctca gtgtcagaat tggaagagtg tgtggtggat    15300

ggcactgatt gacattgtgc ctctaagtca cctattcaat tagggcgacc gtgtgggggt    15360

aaaatttaat tggcgagaac catgcggccg caattaaaaa aaaaaaaaaa aaaaaaaaaa    15420

aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa                                     15450


<210>  6
<211>  15450
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  P129-PKC12-FL passage 52 complete genome (15,450 nt) full length 
       vaccine virus

<400>  6
atgacgtata ggtgttggct ctatgccacg gcatttgtat tgtcaggagc tgtggccatt       60

ggcacagccc aaaacttgct gcacggaaaa cgcccttctg tgacagcctt cttcagggga      120

gcttaggggt ctgtccctag caccttgctt ctggagttgc actgctttac ggtctctcca      180

cccctttaac catgtctggg atacttgatc ggtgcacgtg cacccccaat gccagggtgt      240

ttatggcgga gggccaagtc tactgcacac gatgtctcag tgcacggtct ctccttcctc      300

tgaatctcca agttcctgag cttggggtgc tgggcctatt ttataggccc gaagagccac      360

tccggtggac gttgccacgt gcattcccca ctgtcgagtg ctcccctgcc ggggcctgct      420

ggctttctgc gatctttcca attgcacgaa tgaccagtgg aaacctgaac tttcaacaaa      480

gaatggtgcg ggttgcagct gagatttaca gagccggcca actcacccct gcagttttga      540

aggctctaca agtttatgaa cggggttgtc gctggtaccc cattgtcgga cctgtccctg      600

gagtggccgt ttacgccaac tccctacatg tgagtgacaa acctttcccg ggagcaactc      660

atgtgttaac caacctaccg ctcccgcaga ggcccaagcc tgaagacttt tgcccttttg      720

agtgtgctat ggctaacgtc tatgacattg gccataacgc cgtcatgtat gtggccagag      780

ggaaagtctc ctgggcccct cgtggcgggg atgaagtgaa atttgaaacc gtccccgaag      840

agttgaagtt gattgcgaac cgactccaca tctccttccc gccccaccac gcagtggaca      900

tgtctgagtt tgccttcata gcccctggga gtggtgtctc cttgcgggtc gagcaccaac      960

acggctgcct tcccgctgat actgtccctg atgggaactg ctggtggtac ttgtttgact     1020

tgctcccacc ggaagttcag aataaagaaa ttcgccgtgc taaccaattt ggctatcaaa     1080

ccaagcatgg tgtccatggc aagtacctac agcggaggct gcaagttaat ggtctccgag     1140

cagtgactga tacagatgga cctattgtcg tacagtactt ctctgttagg gagagttgga     1200

tccgccactt cagactggcg gaagaaccta gcctccctgg gtttgaagac ctcctcagaa     1260

taagggtaga gcctaatacg tcgccaatgg gtggcaaggg tgaaaaaatc ttccggtttg     1320

gcagtcacaa gtggtacggt gctggaaaga gagcaaggag agcacgctct ggtgcgactg     1380

ccacggtcgc tcaccgcgct ttgcccgctc gcgaagccca gcaggccaag aagctcgagg     1440

ttgccagcgc caacagggct gagcatctca agtactattc cccgcctgcc gacgggaact     1500

gtggttggca ctgcatttcc gccattacca accggatggt gaattccaaa tttgaaacca     1560

ctcttcccga gagagtgaga ccttcagatg actgggctac tgacgaggat cttgtgaata     1620

ccatccaaat cctcaggctc cccgcggcct tggacaggaa cggtgcttgt gctggcgcca     1680

agtacgtgct caagctggaa ggtgagcact ggaccgtctc tgtgacccct gggatgaccc     1740

cttctttgct cccccttgaa tgtgttcagg gttgttgtga gcataagagc ggtcttggtt     1800

tcccagacgt ggtcgaagtt tccggatttg accctgcctg tcttgaccga cttgctgaga     1860

taatgcactt gcctagcagt gtcatcccag ctgctctggc cgagatgtcc gacgacttca     1920

atcgtctggc ttccccggcc gccactgtgt ggactgtttc gcaattcttt gcccgccaca     1980

gaggaggaga gcatcctgac caggtgtgct tagggaaaat tatcaacctt tgtcaggtga     2040

ttgaggaatg ctgctgttcc cggaacaaag ccaaccgggc taccccggaa gaggttgcgg     2100

caaaagttga ccagtacctc cgtggtgcag caagccttgg agaatgcttg gccaagcttg     2160

agagggctcg cccgccgagc gcgacggaca cctcctttga ttggaatgtt gtgcttcctg     2220

gggttgagac ggcgaatcag acaaccaaac agctccatgt caaccagtgc cgcgctctgg     2280

ttcctgtcgt gactcaagag cctttggaca gagactcggt ccctctgacc gccttctcgc     2340

tgtccaattg ctactaccct gcacaaggtg acgaggtccg tcaccgtgag aggctaaact     2400

ccttgctctc taagttggag ggggttgttc gtgaggaata tgggctcacg ccaactggac     2460

ctggcccgcg acccgcactg ccgaacgggc tcgacgagct taaagaccag atggaggagg     2520

atctgctgaa attagtcaac gcccaggcaa cttcagaaat gatggcctgg gcagccgagc     2580

aggttgatct aaaagcttgg gtcaaaaatt acccacggtg gacaccgcca ccccctccac     2640

caagagttca gcctcgaaaa acgaagtctg tcaagagctt gctagagaac aagcctgtcc     2700

ctgctccgcg caggaaggtc agatctgatt gtggcagccc gattttgatg ggcgacaatg     2760

ttcctaacgg ttgggaagat tcgactgttg gtggtcccct tgatctttcg gcaccatccg     2820

agccgatgac acctctgagt gagcctgtac ttatttccag gccagtgaca tctttgagtg     2880

tgccggcccc agttcctgca ccgcgtagag ctgtgtcccg accgatgacg ccctcgagtg     2940

agccaatttt tgtgtctgca ctgcgacaca aatttcagca ggtggaaaaa gcaaatctgg     3000

cggcagcagc gccgatgtgc caggacgaac ccttagattt gtctgcatcc tcacagactg     3060

aatatgaggc ttccccccta acaccaccgc agaacgtggg cattctggag gtaagggggc     3120

aagaagctga ggaagttctg agtgaaatct cggatattct gaatgatacc aaccctgcac     3180

ctgtgtcatc aagcagctcc ctgtcaagtg ttaagatcac acgcccaaaa tactcagctc     3240

aagccattat cgactcgggc gggccctgca gtgggcacct ccaaagggaa aaagaagcat     3300

gcctccgcat catgcgtgaa gcttgtgatg cggccaagct tagtgaccct gccacgcagg     3360

aatggctttc tcgcatgtgg gatagggtgg acatgctgac ttggcgcaac acgtctgctt     3420

accaggcgtt tcgcacctta gatggcaggt ttgggtttct cccaaagatg atactcgaga     3480

cgccgccgcc ctacccgtgt gggtttgtga tgttgcctca cacccctgca ccttccgtga     3540

gtgcagagag cgaccttacc attggttcag tcgccactga agatattcca cgcatcctcg     3600

ggaaaataga aaataccggt gagatgatca accagggacc cttggcatcc tctgaggaag     3660

aaccggtata caaccaacct gccaaagact cccggatatc gtcgcggggg tctgacgaga     3720

gcacagcagc tccgtccgcg ggtacaggtg gcgccggctt atttactgat ttgccacctt     3780

cagacggcgt agatgcggac ggtggggggc cgttgcagac ggtaagaaag aaagctgaaa     3840

ggctcttcga ccaattgagc cgtcaggttt ttaacctcgt ctcccatctc cctgttttct     3900

tctcacacct cttcaaatct gacagtggtt attctccggg tgattggggt tttgcagctt     3960

ttactctatt ttgcctcttt ttgtgttaca gctacccatt cttcggtttc gttcccctct     4020

tgggtgtatt ttctgggtct tctcggcgtg tgcgcatggg ggtttttggc tgctggctgg     4080

cttttgctgt tggcctgttc aagcctgtgt ccgacccagt cggcactgct tgtgagtttg     4140

actcgccaga gtgcaggaac gtccttcatt cttttgagct tctcaaacct tgggaccctg     4200

ttcgcagcct tgttgtgggc cccgtcggtc tcggtcttgc cattcttggc aagttactgg     4260

gcggggcacg ctacatctgg cattttttgc ttaggcttgg cattgttgca gattgtatct     4320

tggctggagc ttatgtgctt tctcaaggta ggtgtaaaaa gtgctgggga tcttgtataa     4380

gaactgctcc taatgaaatc gccttcaacg tgttcccttt tacacgtgcg accaggtcgt     4440

cactcatcga cctgtgcgat cggttttgtg cgccaacagg catggacccc attttcctcg     4500

ccactgggtg gcgtgggtgc tggaccggcc gaagtcccat tgagcaaccc tctgaaaaac     4560

ccatcgcgtt cgcccagttg gatgaaaaga ggattacggc tagaactgtg gtcgctcagc     4620

cttatgatcc taatcaagcc gtgaagtgct tgcgggtgtt acaggcgggt ggggcgatgg     4680

tggccgaggc agtcccaaaa gtggccaaag tttctgctat tccattccga gccccttttt     4740

ttcccaccgg agtgaaagtt gatcccgagt gcaggatcgt ggttgacccc gatactttta     4800

ctacagccct ccggtctggt tactctacca caaacctcgt ccttggtgtg ggggactttg     4860

cccagctgaa tggactaaag atcaggcaaa tttccaagcc ttcgggagga ggcccacacc     4920

tcattgctgc cctgcatgtt gcctgctcga tggcgttgca catgcttgct ggggtttatg     4980

taacttcagt ggggtcttgc ggtgccggca ccaacgatcc atggtgcact aatccgtttg     5040

ccgttcctgg ctacggacca ggctctctct gcacgtccag attgtgcatc tcccaacatg     5100

gccttaccct gcccttgaca gcacttgtgg cgggattcgg tcttcaggaa atcgccttgg     5160

tcgttttgat tttcgtttcc atcggaggca tggctcatag gttgagttgt aaggctgata     5220

tgctgtgcat tttacttgca atcgccagct atgtttgggt accccttacc tggttgcttt     5280

gtgtgtttcc ttgttggttg cgctggttct ctttgcaccc ccttaccatc ctatggttgg     5340

tgtttttctt gatttctgta aatatgcctt cgggaatctt ggccgtggtg ttattggttt     5400

ctctttggct tttgggacgt tatactaaca ttgctggtct tgtcaccccc tatgatattc     5460

atcattacac cagtggcccc cgcggtgttg ccgccttggc taccgcacca gatggaacct     5520

acttggctgc cgtccgccgc gctgcgttga ctggtcgcac catgctgttc accccgtctc     5580

agcttgggtc ccttcttgag ggcgctttca gaactcgaaa gccctcactg aacaccgtca     5640

atgtggttgg gtcctccatg ggctctggtg gagtgttcac catcgacggg aaaattaggt     5700

gcgtgactgc cgcacatgtc cttacgggta attcggctag ggtttccgga gtcggcttca     5760

atcaaatgct tgactttgat gtgaaagggg acttcgccat agctgattgc ccgaattggc     5820

aaggagctgc tcccaagacc caattctgcg aggacggatg gactggccgt gcctattggc     5880

tgacatcctc tggcgtcgaa cccggtgtta ttgggaatgg attcgccttc tgcttcaccg     5940

cgtgcggcga ttccgggtcc ccagtgatca ccgaagctgg tgagattgtc ggcgttcaca     6000

caggatcaaa taaacaagga ggtggcatcg tcacgcgccc ttcaggccag ttttgtaacg     6060

tggcacccat caagctgagc gaattaagtg aattctttgc tggacccaag gtcccgctcg     6120

gtgatgtgaa ggttggcagc cacataatta aagacacgtg cgaagtacct tcagatcttt     6180

gcgccttgct tgctgccaaa cctgaactgg agggaggcct ctccaccgtc caacttctgt     6240

gtgtgttttt cctactgtgg agaatgatgg gacatgcctg gacgcccttg gttgctgtgg     6300

ggtttttcat tctgaatgag gttctcccag ctgtcctggt tcggagtgtt ttctcctttg     6360

ggatgtttgt gctatcttgg ctcacaccat ggtctgcgca agttctgatg atcaggcttc     6420

taacagcagc tcttaacagg aacagatggt cacttgcctt ttacagcctt ggtgcggtga     6480

ccggttttgt cgcagatctt gcggtaactc aagggcaccc gttgcaggca gtaatgaatt     6540

tgagcaccta tgccttcctg cctcggatga tggttgtgac ctcaccagtc ccagtgattg     6600

cgtgtggtgt tgtgcaccta cttgccatca ttttgtactt gttcaagtac cgcggcctgc     6660

acaatgttct tgttggtgat ggagcgtttt ctgcagcttt cttcttgcga tactttgccg     6720

agggaaagtt gagggaaggg gtgtcgcaat cctgcggaat gaatcatgag tcattgactg     6780

gtgccctcgc tatgagactc aatgacgagg acttggactt ccttacgaaa tggactgatt     6840

ttaagtgctt tgtttctgcg tccaacatga ggaatgcagc aggccaattc atcgaggctg     6900

cctatgcaaa agcacttaga attgaacttg cccagttggt gcaggttgat aaggttcgag     6960

gtactttggc caagcttgag gcttttgctg ataccgtggc accccaactc tcgcccggtg     7020

acattgttgt tgctcttggc catacgcctg ttggcagcat cttcgaccta aaggttggtg     7080

gtaccaagca tactctccaa gtcattgaga ccagagtcct tgccgggtcc aaaatgaccg     7140

tggcgcgcgt cgttgaccca acccccacgc ccccacccgc acccgtgccc atccccctcc     7200

caccgaaagt tctagagaat ggtcccaacg cctgggggga tggggaccgt ttgaataaga     7260

agaagaggcg taggatggaa accgtcggca tctttgtcat gggtgggaag aagtaccaga     7320

aattttggga caagaattcc ggtgatgtgt tttacgagga ggtccatgac aacacagatg     7380

cgtgggagtg cctcagagtt ggtgaccctg ccgactttaa ccctgagaag ggaactctgt     7440

gtgggcatac tactattgaa gataaggatt acaaagtcta cgcctcccca tctggcaaga     7500

agttcctggt ccccgtcaac ccagagagcg gaagagccca atgggaagct gcaaagcttt     7560

ccgtggagca ggcccttggc atgatgaatg tcgacggtga actgacggcc aaagaagtgg     7620

agaaactgaa aagaataatt gacaaacttc agggccttac taaggagcag tgtttaaact     7680

gctagccgcc agcggcttga cccgctgtgg tcgcggcggc ttggttgtta ctgagacagc     7740

ggtaaaaata gtcaaatttc acaaccggac tttcacccta gggcctgtga atttaaaagt     7800

ggccagtgag gttgagctga aagacgcggt cgagcacaac caacacccgg ttgcaagacc     7860

ggttgacggt ggtgttgtgc tcctgcgttc cgcagttcct tcgcttatag atgtcctgat     7920

ctccggtgct gacgcatctc ctaagttact cgctcgtcac gggccgggga acactgggat     7980

cgatggcacg ctttgggact ttgaggccga ggccaccaaa gaggaaattg cgctcagtgc     8040

gcaaataata caggcttgtg acattaggcg cggtgacgca cctgaaattg gtctccctta     8100

caagctgtac cctgttaggg gcaaccctga gcgggtaaaa ggagttttac agaatacaag     8160

gtttggagac ataccttaca aaacccccag tgacactggg agcccagtgc acgcggctgc     8220

ctgcctcacg cccaatgcca ctccggtgac tgatgggcgc tccgtcttgg ctactaccat     8280

gccctccggt tttgaattgt atgtaccgac cattccagcg tctgtccttg attatcttga     8340

ctctaggcct gactgcccca aacagttgac agagcacggc tgtgaggatg ccgcattgag     8400

agacctctcc aagtatgact tgtccaccca aggctttgtt ttacctgggg ttcttcgcct     8460

tgtgcgtaag tacctgtttg cccacgtggg taagtgcccg cccgttcatc ggccttccac     8520

ttaccctgcc aagaattcta tggctggaat aaatgggaac aggtttccaa ccaaggacat     8580

tcagagcgtc cccgaaatcg acgttctgtg cgcacaggcc gtgcgagaaa actggcaaac     8640

tgttacccct tgtaccctca agaaacagta ttgtgggaag aagaagacta ggacaatact     8700

cggcaccaat aatttcattg cgttggccca ccgggcagcg ttgagtggtg tcacccaggg     8760

cttcatgaaa aaggcgttta actcgcccat cgccctcggg aaaaacaaat ttaaggagct     8820

acagactccg atcttaggca ggtgccttga agctgatctt gcatcctgtg atcgatccac     8880

acctgcaatt gtccgctggt ttgccgccaa ccttctttat gaacttgcct gtgctgaaga     8940

gcacctaccg tcgtacgtgc tgaactgctg ccatgaccta ttggtcacgc agtccggcgc     9000

agtgactaag aggggtggcc tgtcgtctgg cgacccgatc acttctgtgt ctaacaccat     9060

ttacagcttg gtgatatatg cacagcacat ggtgcttagt tactttaaaa gtggtcaccc     9120

tcatggcctt ctgttcctac aagaccagct gaagttcgag gacatgctca aagtccaacc     9180

cctgatcgtc tattcggacg acctcgtgct gtatgccgaa tctcccacca tgccgaacta     9240

ccactggtgg gtcgaacatc tgaatttgat gctgggtttt cagacggacc caaagaagac     9300

agccataacg gactcgccat catttctagg ctgtaggata ataaatggac gccagctagt     9360

ccccaaccgt gacaggatcc tcgcggccct cgcttaccat atgaaggcaa acaatgtttc     9420

tgaatactac gccgcggcgg ctgcaatact catggacagc tgtgcttgtt tagagtatga     9480

tcctgaatgg tttgaagagc ttgtggttgg gatagcgcat tgcgcccgca aggacggcta     9540

cagctttccc ggcccgccgt tcttcttgtc catgtgggaa aaactcagat ccaatcatga     9600

ggggaagaag tccagaatgt gcgggtattg cggggccctg gctccgtacg ccactgcctg     9660

tggcctcgac gtctgtattt accacaccca cttccaccag cattgtccag tcacaatctg     9720

gtgtggccac ccggctggtt ctggttcttg tagtgagtgc aaaccccccc tagggaaagg     9780

cacaagccct ctagatgagg tgttagaaca agtcccgtat aagcctccac ggactgtaat     9840

catgcatgtg gagcagggtc tcacccctct tgacccaggc agataccaga ctcgccgcgg     9900

attagtctcc gttaggcgtg gcatcagagg aaatgaagtt gacctaccag acggtgatta     9960

tgctagcacc gccctactcc ccacttgtaa agagatcaac atggtcgctg tcgcctctaa    10020

tgtgttgcgc agcaggttca tcatcggtcc gcccggtgct gggaaaacat actggctcct    10080

tcagcaggtc caggatggtg atgtcattta cacaccgact caccagacca tgctcgacat    10140

gattagggct ttggggacgt gccggttcaa cgtcccagca ggtgcaacgc tgcaattccc    10200

tgccccctcc cgtaccggcc cgtgggttcg catcctagcc ggcggttggt gtcctggtaa    10260

gaattccttc ttggatgaag cagcgtattg taatcacctt gatgtcttga ggctccttag    10320

caaaaccacc ctcacctgtc tgggagactt caaacaactc cacccagtgg gttttgattc    10380

tcattgctat gtttttgaca tcatgcctca gacccagttg aagaccatct ggagattcgg    10440

acagaacatc tgtgatgcca tccaaccaga ttacagggac aaacttgtgt ccatggtcaa    10500

cacaacccgt gtaacccacg tggaaaaacc tgtcaagtat gggcaagtcc tcacccctta    10560

ccacagggac cgagaggacg gcgccatcac aattgactcc agtcaaggcg ccacatttga    10620

tgtggtcaca ctgcatttgc ccactaaaga ttcactcaac aggcaaagag cccttgttgc    10680

tatcaccagg gcaagacatg ctatctttgt gtatgaccca cacaggcaat tgcagagcat    10740

gtttgatctt cctgcgaagg gcacacccgt caacctcgca gtgcaccgtg atgagcagct    10800

gatcgtactg gatagaaata ataaagaatg cacagttgct caggctctag gcaacggaga    10860

taaatttagg gccaccgaca agcgcgttgt agattctctc cgcgccattt gtgctgatct    10920

ggaagggtcg agctctccgc tccccaaggt cgcacacaac ttgggatttt atttctcacc    10980

tgatttgaca cagtttgcta aactcccggt agaccttgca ccccactggc ccgtggtgac    11040

aacccagaac aatgaaaagt ggccggatcg gctggttgcc agccttcgcc ctgtccataa    11100

gtatagccgt gcgtgcattg gtgccggcta tatggtgggc ccctcggtgt ttctaggcac    11160

ccctggggtc gtgtcatact acctcacaaa atttgtcaag ggcgaggctc aagtgcttcc    11220

ggagacagtc ttcagcaccg gccgaattga ggtggattgc cgggagtatc ttgatgacag    11280

ggagcgagaa gttgctgagt ccctcccaca tgccttcatt ggcgacgtca aaggcaccac    11340

cgttggggga tgtcatcatg tcacctccaa ataccttccg cgcttccttc ccaaggaatc    11400

agtcgcggta gtcggggttt cgagccccgg gaaagccgca aaagcagtgt gcacattgac    11460

ggatgtgtac ctcccagacc ttgaggccta cctccaccca gagactcagt ccaagtgctg    11520

gaaagttatg ttggacttca aggaagttcg actgatggtc tggaaagaca agacggccta    11580

tttccaactt gaaggccgct atttcacctg gtatcagctt gcaagctacg cctcgtacat    11640

ccgtgttcct gtcaactcca cggtgtatct ggacccctgc atgggccctg ccctttgcaa    11700

cagaagagtt gtcgggtcca cccattgggg agctgacctc gcagtcaccc cttatgatta    11760

cggtgctaaa atcatcttgt ctagcgctta ccatggtgaa atgcctcctg gatacaagat    11820

tctggcgtgc gcggagttct cgctcgacga cccagtcaag tacaaacaca cctggggttt    11880

tgaatcggat acagcgtatc tgtatgagtt caccggaaac ggtgaggact gggaggatta    11940

caatgatgcg tttcgtgcgc gccagaaagg gaaaatttat aaggccactg ctaccagcat    12000

gaagttttat tttcccccgg gccccgtcat tgaaccaact ttaggcctga attgaaatga    12060

aatggggtct atacaaagcc tcttcgacaa aattggccag ctttttgtgg atgctttcac    12120

ggaatttttg gtgtccattg ttgatatcat catatttttg gccattttgt ttggcttcac    12180

catcgccggt tggctggtgg tcttttgcat cagattggtt tgctccgcgg tattccgtgc    12240

gcgccctgcc attcaccctg agcaattaca gaagatccta tgaggccttt ctttctcagt    12300

gccgggtgga cattcccacc tggggggtaa aacacccttt ggggatgttt tggcaccata    12360

aggtgtcaac cctgattgat gaaatggtgt cgcgtcgaat gtaccgcgtc atggataaag    12420

cagggcaagc tgcctggaaa caggtggtga gcgaggctac gctgtctcgc attagtagtc    12480

tggatgtggt ggctcatttt caacatcttg ccgccattga agccgagacc tgtaaatatt    12540

tggcttctcg actgcccatg ctacacaacc tgcgcatgac agggtcaaat gtaaccatag    12600

tgtataatag cactttaaat caggtgtttg ctatttttcc aacccctggt tcccggccaa    12660

agcttcatga ttttcagcaa tggctaatag ctgtacattc ctccatattt tcctctgttg    12720

cagcttcttg tactcttttt gttgtgctgt ggttgcgggt tccaatgcta cgtactgttt    12780

ttggtttccg ctggttaggg gcaatttttc tttcgaactc atggtgaatt acacggtgtg    12840

tccaccttgc ctcacccgac aagcagccgc tgaggtcctt gaacccggta ggtctctttg    12900

gtgcaggata gggcatgacc gatgtgggga ggacgatcac gacgaactgg ggttcatggt    12960

tccgcctggc ctctccagcg aaagccactt gaccagtgtt tacgcctggt tggcgttcct    13020

gtccttcagc tacacggccc agttccatcc cgagatattt gggataggga acgtgagtga    13080

agtttatgtt gacatcaagc accaattcat ctgcgccgtt catgacgggc agaacaccac    13140

cttgcctcgc catgacaata tttcagccgt atttcagacc tactatcaac atcaggtcga    13200

cggcggcaat tggtttcacc tagaatggct gcgtcccttc ttttcctctt ggttggtttt    13260

aaatgtttcg tggtttctca ggcgttcgcc tgcaagccat gtttcagttc gagtctttca    13320

gacatcaaaa ccaacactac cgcagcatca ggctttgttg tcctccagga catcagctgc    13380

cttaggcatg gcgactcgtc ctttccgacg attcgcaaaa gctctcaatg ccgcacggcg    13440

atagggacac ctgtgtatat caccatcaca gccaatgtga cagatgagaa ttacttacat    13500

tcttctgatc tcctcatgct ttcttcttgc cttttctatg cttctgagat gagtgaaaag    13560

ggattcaagg tggtatttgg caatgtgtca ggcatcgtgg ctgtgtgtgt caactttacc    13620

agctacgtcc aacatgtcaa agagtttact caacgctcct tggtggtcga tcatgtgcgg    13680

ctgcttcatt tcatgacacc tgagaccatg aggtgggcaa ccgttttagc ctgtcttttt    13740

gccatcctac tggcaatttg aatgttcaag tatgttgggg aaatgcttga ccgcgggctg    13800

ttgctcgcga ttgctttctt tgtggtgtat cgtgccgttc tggtttgctg tgctcggcaa    13860

cgccaacagc agcagcagct ctcatttcca gttgatttat aacttgacgc tatgtgagct    13920

gaatggcaca gattggctgg cagaaaaatt tgattgggcg gtggagactt ttgtcatctt    13980

tcccgtgttg actcacattg tttcctattg tgcactcacc accagccatt tccttgacac    14040

agttggtctg gttactgtgt ccaccgccgg gttttatcac gggcggtatg tcttgagtag    14100

catctacgcg gtctgtgctc tggctgcgtt gatttgcttc gttattaggc ttgcgaagaa    14160

ctgcatgtcc tggcgctact cttgtaccag atataccaac ttccttctgg acactaaggg    14220

cagactctat cgttggcggt cgcccgttat catagaaaaa aggggtaagg ttgaggtcga    14280

aggtcatctg atcgacctca aaagagttgt gcttgatggt tccgtggcaa cccctttaac    14340

cagagtttca gcggaacaat ggggtcgtct ctagacgact tttgccatga tagcactgct    14400

ccacaaaagg tgcttttggc gttttccatt acctacacgc cagtaatgat atatgctcta    14460

aaggtaagtc gcggccgact gctagggctt ctgcaccttt tgatctttct gaattgtgct    14520

tttaccttcg ggtacatgac attcgcgcac tttcagagca caaatagggt cgcgctcgct    14580

atgggagcag tagttgcact tctttggggg gtgtactcag ccatagaaac ctggaaattc    14640

atcacctcca gatgccgttt gtgcttgcta ggccgcaagt acattctggc ccctgcccac    14700

cacgtcgaaa gtgccgcggg ctttcatccg attgcggcaa atgataacca cgcatttgtc    14760

gtccggcgtc ccggctccat tacggttaac ggcacattgg tgcccgggtt gaaaagcctc    14820

gtgttgggtg gcagaaaagc tgttaaacag ggagtggtaa accttgtcaa atatgccaaa    14880

taacaacggc aagcagcaaa agaaaaagaa ggggaatggc cagccagtca accagctgtg    14940

ccagatgctg ggtaaaatca tcgcccagca aaaccagtcc agaggcaagg gaccgggcaa    15000

gaaaagtaag aagaaaaacc cggagaagcc ccattttcct ctagcgaccg aagatgacgt    15060

caggcatcac ttcacccctg gtgagcggca attgtgtctg tcgtcgatcc agactgcctt    15120

taaccagggc gctggaactt gtaccctgtc agattcaggg aggataagtt acactgtgga    15180

gtttagtttg ccgacgcatc atactgtgcg cctgatccgc gtcacagcat caccctcagc    15240

atgatgggct ggcattcttt aggcacctca gtgtcagaat tggaagaatg tgtggtggat    15300

ggcactgatt gacattgtgc ctctaagtca cctattcaat tagggcgacc gtgtgggggt    15360

aaaatttaat tggcgagaac catgcggccg caattaaaaa aaaaaaaaaa aaaaaaaaaa    15420

aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa                                     15450


<210>  7
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 735, ORF1a: 182, Nsp1b: 2, passage 0 amino acid

<400>  7

Ala Met Ala Asp Val Tyr Asp 
1               5           


<210>  8
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 735, ORF1a: 182, Nsp1b: 2, passage 17 amino acid

<400>  8

Ala Met Ala Asn Val Tyr Asp 
1               5           


<210>  9
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 735, ORF1a: 182, Nsp1b: 2, passage 52 amino acid

<400>  9

Ala Met Ala Asn Val Tyr Asp 
1               5           


<210>  10
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 756, ORF1a: 189, Nsp1b: 9, passage 0 amino acid

<400>  10

Ile Ser His Asp Ala Val Met 
1               5           


<210>  11
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 756, ORF1a: 189, Nsp1b: 9, passage 17 amino acid

<400>  11

Ile Gly His Asn Ala Val Met 
1               5           


<210>  12
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 756, ORF1a: 189, Nsp1b: 9, passage 52 amino acid

<400>  12

Ile Gly His Asn Ala Val Met 
1               5           


<210>  13
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 992, ORF1a: 267, Nsp1b: 87, passage 0 amino acid

<400>  13

Thr Val Pro Glu Gly Asn Cys 
1               5           


<210>  14
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 992, ORF1a: 267, Nsp1b: 87, passage 17 amino acid

<400>  14

Thr Val Pro Asp Gly Asn Cys 
1               5           


<210>  15
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 992, ORF1a: 267, Nsp1b: 87, passage 52 amino acid

<400>  15

Thr Val Pro Asp Gly Asn Cys 
1               5           


<210>  16
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 1009, ORF1a: 273, Nsp1b: 93, passage 0 amino acid

<400>  16

Cys Trp Trp Cys Leu Phe Asp 
1               5           


<210>  17
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 1009, ORF1a: 273, Nsp1b: 93, passage 17 amino 
       acid

<400>  17

Cys Trp Trp Tyr Leu Phe Asp 
1               5           


<210>  18
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 1009, ORF1a: 273, Nsp1b: 93, passage 52 amino 
       acid

<400>  18

Cys Trp Trp Tyr Leu Phe Asp 
1               5           


<210>  19
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 1096, ORF1a: 302, Nsp1b: 122, passage 0 amino 
       acid

<400>  19

His Gly Val Pro Gly Lys Tyr 
1               5           


<210>  20
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 1096, ORF1a: 302, Nsp1b: 122, passage 17 amino 
       acid

<400>  20

His Gly Val His Gly Lys Tyr 
1               5           


<210>  21
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 1096, ORF1a: 302, Nsp1b: 122, passage 52 amino 
       acid

<400>  21

His Gly Val His Gly Lys Tyr 
1               5           


<210>  22
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2106, ORF1a: 639, Nsp2: 256, passage 0 amino acid

<400>  22

Ala Ala Lys Ile Asp Gln Tyr 
1               5           


<210>  23
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2106, ORF1a: 639, Nsp2: 256, passage 17 amino 
       acid

<400>  23

Ala Ala Lys Val Asp Gln Tyr 
1               5           


<210>  24
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2106, ORF1a: 639, Nsp2: 256, passage 52 amino 
       acid

<400>  24

Ala Ala Lys Val Asp Gln Tyr 
1               5           


<210>  25
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2185, ORF1a: 665, Nsp2: 282, passage 0 amino acid

<400>  25

Pro Ser Ala Met Asp Thr Ser 
1               5           


<210>  26
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2185, ORF1a: 665, Nsp2: 282, passage 17 amino 
       acid

<400>  26

Pro Ser Ala Thr Asp Thr Ser 
1               5           


<210>  27
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2185, ORF1a: 665, Nsp2: 282, passage 52 amino 
       acid

<400>  27

Pro Ser Ala Thr Asp Thr Ser 
1               5           


<210>  28
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2403, ORF1a: 738, Nsp2: 355, passage 0 amino acid

<400>  28

Leu Val Ser Val Leu Ser Lys 
1               5           


<210>  29
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2403, ORF1a: 738, Nsp2: 355, passage 17 amino 
       acid

<400>  29

Leu Asn Ser Leu Leu Ser Lys 
1               5           


<210>  30
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 2403, ORF1a: 738, Nsp2: 355, passage 52 amino 
       acid

<400>  30

Leu Asn Ser Leu Leu Ser Lys 
1               5           


<210>  31
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 3019, ORF1a: 943, Nsp2: 560, passage 0 amino acid

<400>  31

Ala Pro Met Tyr Gln Asp Glu 
1               5           


<210>  32
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 3019, ORF1a: 943, Nsp2: 560, passage 17 amino 
       acid

<400>  32

Ala Pro Met Cys Gln Asp Glu 
1               5           


<210>  33
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 3019, ORF1a: 943, Nsp2: 560, passage 52 amino 
       acid

<400>  33

Ala Pro Met Cys Gln Asp Glu 
1               5           


<210>  34
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 4477, ORF1a: 1429, Nsp3: 72, passage 0 amino acid

<400>  34

Cys Ala Pro Lys Gly Met Asp 
1               5           


<210>  35
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 4477, ORF1a: 1429, Nsp3: 72, passage 17 amino 
       acid

<400>  35

Cys Ala Pro Thr Gly Met Asp 
1               5           


<210>  36
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 4477, ORF1a: 1429, Nsp3: 72, passage 52 amino 
       acid

<400>  36

Cys Ala Pro Thr Gly Met Asp 
1               5           


<210>  37
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 4705, ORF1a: 1505, Nsp3: 148, passage 0 amino 
       acid

<400>  37

Pro Lys Val Val Lys Val Ser 
1               5           


<210>  38
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 4705, ORF1a: 1505, Nsp3: 148, passage 17 amino 
       acid

<400>  38

Pro Lys Val Ala Lys Val Ser 
1               5           


<210>  39
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 4705, ORF1a: 1505, Nsp3: 148, passage 52 amino 
       acid

<400>  39

Pro Lys Val Ala Lys Val Ser 
1               5           


<210>  40
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 5985, ORF1a: 1932, Nsp4: 129, passage 0 amino 
       acid

<400>  40

Ala Gly Glu Leu Val Gly Val 
1               5           


<210>  41
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 5985, ORF1a: 1932, Nsp4: 129, passage 17 amino 
       acid

<400>  41

Ala Gly Glu Ile Val Gly Val 
1               5           


<210>  42
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 5985, ORF1a: 1932, Nsp4: 129, passage 52 amino 
       acid

<400>  42

Ala Gly Glu Ile Val Gly Val 
1               5           


<210>  43
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 7419, ORF1a: 2410, Nsp7: 217, passage 0 amino 
       acid

<400>  43

Ala Asp Phe Asp Pro Glu Lys 
1               5           


<210>  44
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 7419, ORF1a: 2410, Nsp7: 217, passage 17 amino 
       acid

<400>  44

Ala Asp Phe Asn Pro Glu Lys 
1               5           


<210>  45
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 7419, ORF1a: 2410, Nsp7: 217, passage 52 amino 
       acid

<400>  45

Ala Asp Phe Asn Pro Glu Lys 
1               5           


<210>  46
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 8831, ORF1a/1b: 2881, Nsp9: 429, passage 0 amino 
       acid

<400>  46

Gln Thr Pro Val Leu Gly Arg 
1               5           


<210>  47
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>   genome position 8831, ORF1a/1b: 2881, Nsp9: 429, passage 17 
       amino acid

<400>  47

Gln Thr Pro Ile Leu Gly Arg 
1               5           


<210>  48
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 8831, ORF1a/1b: 2881, Nsp9: 429, passage 52 amino
       acid

<400>  48

Gln Thr Pro Ile Leu Gly Arg 
1               5           


<210>  49
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 13,857, ORF5: 29, passage 0 amino acid

<400>  49

Ala Val Leu Val Asn Ala Asn 
1               5           


<210>  50
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 13,857, ORF5: 29, passage 17 amino acid

<400>  50

Ala Val Leu Gly Asn Ala Asn 
1               5           


<210>  51
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 13,857, ORF5: 29, passage 52 amino acid

<400>  51

Ala Val Leu Gly Asn Ala Asn 
1               5           


<210>  52
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 14,578, ORF6: 74, passage 0 amino acid

<400>  52

Val Ala Leu Thr Met Gly Ala 
1               5           


<210>  53
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 14,578, ORF6: 74, passage 17 amino acid

<400>  53

Val Ala Leu Ala Met Gly Ala 
1               5           


<210>  54
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 14,578, ORF6: 74, passage 52 amino acid

<400>  54

Val Ala Leu Ala Met Gly Ala 
1               5           


<210>  55
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 14,780, ORF6: 141, passage 0 amino acid

<400>  55

Pro Gly Ser Thr Thr Val Asn 
1               5           


<210>  56
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 14,780, ORF6: 141, passage 17 amino acid

<400>  56

Pro Gly Ser Ile Thr Val Asn 
1               5           


<210>  57
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  genome position 14,780, ORF6: 141, passage 52 amino acid

<400>  57

Pro Gly Ser Ile Thr Val Asn 
1               5           


