                         SEQUENCE LISTING

<110>  VIB VZW
       UNIVERSITEIT GENT
 
<120>  Viral particle based protein-protein interaction trap

<130>  JaTa/VIROTRAP/416

<150>  EP 12169209.9
<151>  2012-05-24

<160>  26    

<170>  PatentIn version 3.5

<210>  1
<211>  51
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  1
ctctaaaagc tgcggggccc gctagcgcca ccatgggtgc gagagcgtca g                51


<210>  2
<211>  54
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  2
tgtattcggt gaattctgag ctcgtcgacc cgccttgtga cgaggggtcg ctgc             54


<210>  3
<211>  30
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  3
gcgactcgag cggaatcagt ctgattgcgg                                        30


<210>  4
<211>  46
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  4
cgcttctaga ttacatatgg ccgctgcccc gccgctccag aatctc                      46


<210>  5
<211>  39
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  5
gcgacatatg ggcacgcgtg tgcaggtgga aaccatctc                              39


<210>  6
<211>  71
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  6
cgcttctaga ttactcgagt gcggccgcga attctgagct cgtcgacccg ccttccagtt       60

ttagaagctc c                                                            71


<210>  7
<211>  83
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  7
tatggagggc agaggcagcc tgctgacctg cggcgacgtg gaggaaaacc ccggccccga       60

ttacaaggat gacgacgata aga                                               83


<210>  8
<211>  85
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  8
cgcgtcttat cgtcgtcatc cttgtaatcg gggccggggt tttcctccac gtcgccgcag       60

gtcagcaggc tgcctctgcc ctcca                                             85


<210>  9
<211>  34
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  9
gaatcggtat tcagcgagtt ccacgatgct gatg                                   34


<210>  10
<211>  34
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  10
catcagcatc gtggaactcg ctgaataccg attc                                   34


<210>  11
<211>  29
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  11
ccccaattga caagtttgta caaaaaagc                                         29


<210>  12
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Primer

<400>  12
gggtctagat caaaccactt tgtacaag                                          28


<210>  13
<211>  7
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  13

Thr Gly Lys Leu Thr Leu Lys 
1               5           


<210>  14
<211>  10
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  14

Glu Ser Ser Asn Val Val Val Thr Glu Arg 
1               5                   10  


<210>  15
<211>  7
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  15

Thr Asn Val Gly Ile Leu Lys 
1               5           


<210>  16
<211>  16
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  16

Ile Ile Arg Gln Glu Pro Ser Asp Ser Pro Met Phe Ile Ile Asn Arg 
1               5                   10                  15      


<210>  17
<211>  16
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  17

Ala Leu Asn Ser Met Gly Gln Asp Leu Glu Arg Pro Leu Glu Leu Arg 
1               5                   10                  15      


<210>  18
<211>  32
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  18

Thr Tyr Val Val Thr Gly Asn Met Gly Ser Asn Asp Lys Val Gly Asp 
1               5                   10                  15      


Phe Val Ala Thr Asp Leu Asp Thr Gly Arg Pro Ser Thr Thr Val Arg 
            20                  25                  30          


<210>  19
<211>  16
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  19

Ile Ile Arg Gln Glu Pro Ser Asp Ser Pro Met Phe Ile Ile Asn Arg 
1               5                   10                  15      


<210>  20
<211>  19
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  20

Thr Met Asn Asn Phe Leu Asp Arg Glu Gln Tyr Gly Gln Tyr Ala Leu 
1               5                   10                  15      


Ala Val Arg 
            


<210>  21
<211>  16
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  21

Tyr Val Met Gly Asn Asn Pro Ala Asp Leu Leu Ala Val Asp Ser Arg 
1               5                   10                  15      


<210>  22
<211>  19
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  22

Thr Met Asn Asn Phe Leu Asp Arg Glu Gln Tyr Gly Gln Tyr Ala Leu 
1               5                   10                  15      


Ala Val Arg 
            


<210>  23
<211>  20
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  23

Val Val Lys Pro Leu Asp Tyr Glu Ala Met Gln Ser Leu Gln Leu Ser 
1               5                   10                  15      


Ile Gly Val Arg 
            20  


<210>  24
<211>  19
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  24

Ile Ser Gly Val Gly Ile Asp Gln Pro Pro Tyr Gly Ile Phe Val Ile 
1               5                   10                  15      


Asn Gln Lys 
            


<210>  25
<211>  22
<212>  PRT
<213>  artificial

<220>
<223>  peptide for Desmoglein 1

<400>  25

Ala Ser Ala Ile Ser Val Thr Val Leu Asn Val Ile Glu Gly Pro Val 
1               5                   10                  15      


Phe Arg Pro Gly Ser Lys 
            20          


<210>  26
<211>  1049
<212>  PRT
<213>  Homo sapiens

<400>  26

Met Asp Trp Ser Phe Phe Arg Val Val Ala Met Leu Phe Ile Phe Leu 
1               5                   10                  15      


Val Val Val Glu Val Asn Ser Glu Phe Arg Ile Gln Val Arg Asp Tyr 
            20                  25                  30          


Asn Thr Lys Asn Gly Thr Ile Lys Trp His Ser Ile Arg Arg Gln Lys 
        35                  40                  45              


Arg Glu Trp Ile Lys Phe Ala Ala Ala Cys Arg Glu Gly Glu Asp Asn 
    50                  55                  60                  


Ser Lys Arg Asn Pro Ile Ala Lys Ile His Ser Asp Cys Ala Ala Asn 
65                  70                  75                  80  


Gln Gln Val Thr Tyr Arg Ile Ser Gly Val Gly Ile Asp Gln Pro Pro 
                85                  90                  95      


Tyr Gly Ile Phe Val Ile Asn Gln Lys Thr Gly Glu Ile Asn Ile Thr 
            100                 105                 110         


Ser Ile Val Asp Arg Glu Val Thr Pro Phe Phe Ile Ile Tyr Cys Arg 
        115                 120                 125             


Ala Leu Asn Ser Met Gly Gln Asp Leu Glu Arg Pro Leu Glu Leu Arg 
    130                 135                 140                 


Val Arg Val Leu Asp Ile Asn Asp Asn Pro Pro Val Phe Ser Met Ala 
145                 150                 155                 160 


Thr Phe Ala Gly Gln Ile Glu Glu Asn Ser Asn Ala Asn Thr Leu Val 
                165                 170                 175     


Met Ile Leu Asn Ala Thr Asp Ala Asp Glu Pro Asn Asn Leu Asn Ser 
            180                 185                 190         


Lys Ile Ala Phe Lys Ile Ile Arg Gln Glu Pro Ser Asp Ser Pro Met 
        195                 200                 205             


Phe Ile Ile Asn Arg Asn Thr Gly Glu Ile Arg Thr Met Asn Asn Phe 
    210                 215                 220                 


Leu Asp Arg Glu Gln Tyr Gly Gln Tyr Ala Leu Ala Val Arg Gly Ser 
225                 230                 235                 240 


Asp Arg Asp Gly Gly Ala Asp Gly Met Ser Ala Glu Cys Glu Cys Asn 
                245                 250                 255     


Ile Lys Ile Leu Asp Val Asn Asp Asn Ile Pro Tyr Met Glu Gln Ser 
            260                 265                 270         


Ser Tyr Thr Ile Glu Ile Gln Glu Asn Thr Leu Asn Ser Asn Leu Leu 
        275                 280                 285             


Glu Ile Arg Val Ile Asp Leu Asp Glu Glu Phe Ser Ala Asn Trp Met 
    290                 295                 300                 


Ala Val Ile Phe Phe Ile Ser Gly Asn Glu Gly Asn Trp Phe Glu Ile 
305                 310                 315                 320 


Glu Met Asn Glu Arg Thr Asn Val Gly Ile Leu Lys Val Val Lys Pro 
                325                 330                 335     


Leu Asp Tyr Glu Ala Met Gln Ser Leu Gln Leu Ser Ile Gly Val Arg 
            340                 345                 350         


Asn Lys Ala Glu Phe His His Ser Ile Met Ser Gln Tyr Lys Leu Lys 
        355                 360                 365             


Ala Ser Ala Ile Ser Val Thr Val Leu Asn Val Ile Glu Gly Pro Val 
    370                 375                 380                 


Phe Arg Pro Gly Ser Lys Thr Tyr Val Val Thr Gly Asn Met Gly Ser 
385                 390                 395                 400 


Asn Asp Lys Val Gly Asp Phe Val Ala Thr Asp Leu Asp Thr Gly Arg 
                405                 410                 415     


Pro Ser Thr Thr Val Arg Tyr Val Met Gly Asn Asn Pro Ala Asp Leu 
            420                 425                 430         


Leu Ala Val Asp Ser Arg Thr Gly Lys Leu Thr Leu Lys Asn Lys Val 
        435                 440                 445             


Thr Lys Glu Gln Tyr Asn Met Leu Gly Gly Lys Tyr Gln Gly Thr Ile 
    450                 455                 460                 


Leu Ser Ile Asp Asp Asn Leu Gln Arg Thr Cys Thr Gly Thr Ile Asn 
465                 470                 475                 480 


Ile Asn Ile Gln Ser Phe Gly Asn Asp Asp Arg Thr Asn Thr Glu Pro 
                485                 490                 495     


Asn Thr Lys Ile Thr Thr Asn Thr Gly Arg Gln Glu Ser Thr Ser Ser 
            500                 505                 510         


Thr Asn Tyr Asp Thr Ser Thr Thr Ser Thr Asp Ser Ser Gln Val Tyr 
        515                 520                 525             


Ser Ser Glu Pro Gly Asn Gly Ala Lys Asp Leu Leu Ser Asp Asn Val 
    530                 535                 540                 


His Phe Gly Pro Ala Gly Ile Gly Leu Leu Ile Met Gly Phe Leu Val 
545                 550                 555                 560 


Leu Gly Leu Val Pro Phe Leu Met Ile Cys Cys Asp Cys Gly Gly Ala 
                565                 570                 575     


Pro Arg Ser Ala Ala Gly Phe Glu Pro Val Pro Glu Cys Ser Asp Gly 
            580                 585                 590         


Ala Ile His Ser Trp Ala Val Glu Gly Pro Gln Pro Glu Pro Arg Asp 
        595                 600                 605             


Ile Thr Thr Val Ile Pro Gln Ile Pro Pro Asp Asn Ala Asn Ile Ile 
    610                 615                 620                 


Glu Cys Ile Asp Asn Ser Gly Val Tyr Thr Asn Glu Tyr Gly Gly Arg 
625                 630                 635                 640 


Glu Met Gln Asp Leu Gly Gly Gly Glu Arg Met Thr Gly Phe Glu Leu 
                645                 650                 655     


Thr Glu Gly Val Lys Thr Ser Gly Met Pro Glu Ile Cys Gln Glu Tyr 
            660                 665                 670         


Ser Gly Thr Leu Arg Arg Asn Ser Met Arg Glu Cys Arg Glu Gly Gly 
        675                 680                 685             


Leu Asn Met Asn Phe Met Glu Ser Tyr Phe Cys Gln Lys Ala Tyr Ala 
    690                 695                 700                 


Tyr Ala Asp Glu Asp Glu Gly Arg Pro Ser Asn Asp Cys Leu Leu Ile 
705                 710                 715                 720 


Tyr Asp Ile Glu Gly Val Gly Ser Pro Ala Gly Ser Val Gly Cys Cys 
                725                 730                 735     


Ser Phe Ile Gly Glu Asp Leu Asp Asp Ser Phe Leu Asp Thr Leu Gly 
            740                 745                 750         


Pro Lys Phe Lys Lys Leu Ala Asp Ile Ser Leu Gly Lys Glu Ser Tyr 
        755                 760                 765             


Pro Asp Leu Asp Pro Ser Trp Pro Pro Gln Ser Thr Glu Pro Val Cys 
    770                 775                 780                 


Leu Pro Gln Glu Thr Glu Pro Val Val Ser Gly His Pro Pro Ile Ser 
785                 790                 795                 800 


Pro His Phe Gly Thr Thr Thr Val Ile Ser Glu Ser Thr Tyr Pro Ser 
                805                 810                 815     


Gly Pro Gly Val Leu His Pro Lys Pro Ile Leu Asp Pro Leu Gly Tyr 
            820                 825                 830         


Gly Asn Val Thr Val Thr Glu Ser Tyr Thr Thr Ser Asp Thr Leu Lys 
        835                 840                 845             


Pro Ser Val His Val His Asp Asn Arg Pro Ala Ser Asn Val Val Val 
    850                 855                 860                 


Thr Glu Arg Val Val Gly Pro Ile Ser Gly Ala Asp Leu His Gly Met 
865                 870                 875                 880 


Leu Glu Met Pro Asp Leu Arg Asp Gly Ser Asn Val Ile Val Thr Glu 
                885                 890                 895     


Arg Val Ile Ala Pro Ser Ser Ser Leu Pro Thr Ser Leu Thr Ile His 
            900                 905                 910         


His Pro Arg Glu Ser Ser Asn Val Val Val Thr Glu Arg Val Ile Gln 
        915                 920                 925             


Pro Thr Ser Gly Met Ile Gly Ser Leu Ser Met His Pro Glu Leu Ala 
    930                 935                 940                 


Asn Ala His Asn Val Ile Val Thr Glu Arg Val Val Ser Gly Ala Gly 
945                 950                 955                 960 


Val Thr Gly Ile Ser Gly Thr Thr Gly Ile Ser Gly Gly Ile Gly Ser 
                965                 970                 975     


Ser Gly Leu Val Gly Thr Ser Met Gly Ala Gly Ser Gly Ala Leu Ser 
            980                 985                 990         


Gly Ala Gly Ile Ser Gly Gly Gly  Ile Gly Leu Ser Ser  Leu Gly Gly 
        995                 1000                 1005             


Thr Ala  Ser Ile Gly His Met  Arg Ser Ser Ser Asp  His His Phe 
    1010                 1015                 1020             


Asn Gln  Thr Ile Gly Ser Ala  Ser Pro Ser Thr Ala  Arg Ser Arg 
    1025                 1030                 1035             


Ile Thr  Lys Tyr Ser Thr Val  Gln Tyr Ser Lys 
    1040                 1045                 


