                         SEQUENCE LISTING

<110>  Syngenta Participations AG
       He, Chengkun
       Fan, Chunyang
       Ke, John
       Zhong, Heng
       Russell, Doug
 
<120>  METHODS AND COMPOSITIONS FOR DETERMINATION OF VECTOR BACKBONE IN 
       A NUCLEIC ACID SAMPLE

<130>  9207-66WO

<150>  US 61/658,802
<151>  2012-06-12

<160>  22    

<170>  PatentIn version 3.5

<210>  1
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  1
catggaagcc atcacaaacg                                                   20


<210>  2
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  2
ttatacgcaa ggcgacaagg t                                                 21


<210>  3
<211>  24
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR probe sequence

<400>  3
catgatgaac ctgaatcgcc agcg                                              24


<210>  4
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  4
gtggacagcc tggacgagat                                                   20


<210>  5
<211>  19
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  5
gaagccactg cggaacatg                                                    19


<210>  6
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR probe sequence

<400>  6
cagaacaaca acgtgccacc tcgaca                                            26


<210>  7
<211>  337
<212>  DNA
<213>  Artificial

<220>
<223>  Backbone junction sequence

<400>  7
agtgagctga taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg       60

agttagaaga gcttaagcgg ccgcggcgcg ccgcccaatg ccaagctttt tcacaccgca      120

tatggtgcac tctcagtaca atctgctctg atgccgcata gttaagccag ccccgacacc      180

cgccaacacc cgctgacgcg ccctgacggg cttgtctgct cccggcatcc gcttacagac      240

aagctgtgac cgtctccggg agctgcatgt gtcagaggtt ttcaccgtca tcaccgaaac      300

gcgcgagacg aaaggggacc ccggacccaa gcttgca                               337


<210>  8
<211>  317
<212>  DNA
<213>  Artificial

<220>
<223>  Backbone junction sequence

<400>  8
gtgagctgat accgctcgcc gcagccgaac gaccgagcgc agcgagtcag tgagcgagga       60

gttagaagag cttaagcggc cgcggcgcgc cgcccaatgc caagcttttt cacaccgcat      120

atggtgcact ctcagtacaa tctgctctga tgccgcatag ttaagccagc cccgacaccc      180

gccaacaccc gctgacgcgc cctgacgggc ttgtctgctc ccggcatccg cttacagaca      240

agctgtgacc gtctccggga gctgcatgtg tcagaggttt tcaccgtcat caccgaaacg      300

cgcgagacga aagggga                                                     317


<210>  9
<211>  333
<212>  DNA
<213>  Artificial

<220>
<223>  Backbone junction sequence

<400>  9
agctgatacc gctcgccgca gccgaacgac cgagcgcagc gagtcagtga gcgaggagtt       60

agaagagctt aagcggccgc ggcgcgccgc ccaatgccaa gctttttcac accgcatatg      120

gtgcactctc agtacaatct gctctgatgc cgcatagtta agccagcccc gacacccgcc      180

aacacccgct gacgcgccct gacgggcttg tctgctcccg gcatccgctt acagacaagc      240

tgtgaccgtc tccgggagct gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc      300

gagacgaaag gggaccccgg acccaagctt gca                                   333


<210>  10
<211>  24
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  10
gcgaggagtt agaagagctt aagc                                              24


<210>  11
<211>  25
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  11
attgtactga gagtgcacca tatgc                                             25


<210>  12
<211>  23
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR probe sequence

<400>  12
ccgcccaatg ccaagctttt tca                                               23


<210>  13
<211>  14
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  13
tgcggcggct gcat                                                         14


<210>  14
<211>  19
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR preimer sequence

<400>  14
gtttcgcttg gtggtcgaa                                                    19


<210>  15
<211>  22
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR probe sequence

<400>  15
cgcttgatcc ggctacctgc cc                                                22


<210>  16
<211>  324
<212>  DNA
<213>  Artificial

<220>
<223>  Backbone junction sequence

<400>  16
gctgataccg ctcgccgcag ccgaacgacc gagcgcagcg agtcagtgag cgaggagtta       60

gaagagctta aagttacgct agggataaca gggtaatata ggcggccgcg gcgcgccgcc      120

caatcccaag cttaagcttt ttcacaccgc aattggtgca ctctcagtac aatctgctct      180

gaagccgctt agttaagcca gccccgacac ccgccaacac ccgctgacgc gccctgacgg      240

gcttgtctgc tcccggcaac cgcttacaga caagctgtga ccgtctccgg gagctggatc      300

tgtcagaggt tttcaccgtc aaca                                             324


<210>  17
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR preimer sequence

<400>  17
gaagagctta aagttacgct agggat                                            26


<210>  18
<211>  24
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  18
gtgaaaaagc ttaagcttgg gatt                                              24


<210>  19
<211>  24
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR probe sequence

<400>  19
acagggtaat ataggcggcc gcgg                                              24


<210>  20
<211>  18
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  20
accgccttcc tgatgctg                                                     18


<210>  21
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR primer sequence

<400>  21
caccggcttc ttggtcttgt                                                   20


<210>  22
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  RT-PCR probe sequence

<400>  22
aactaccgct gccagttcca caccag                                            26


