                         SEQUENCE LISTING

<110>  Curegenix
       An, Songzhu
 
<120>  COMPOUNDS FOR TREATMENT OF CANCER

<130>  1402518.00003

<150>  61/777,427
<151>  2013-03-12

<160>  22    

<170>  PatentIn version 3.5

<210>  1
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Rspo3 5' primer

<400>  1
ggactgaaac acgggtccga gaaataa                                           27


<210>  2
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Rspo3 3' primer

<400>  2
tccttttttt cctcgttctc ccttctg                                           27


<210>  3
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  GAPDH 5' primer

<400>  3
atcttccagg agcgagatcc ctcc                                              24


<210>  4
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  GAPDH 3' primer

<400>  4
cccccctgca aatgagcccc a                                                 21


<210>  5
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  5' primer - fusion variant 1 (PTPRK Exon1 - Rspo3 Exon2)

<400>  5
aaactcggca tggatacgac tgcg                                              24


<210>  6
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  3' primer - fusion variant 1 (PTPRK Exon1 - Rspo3 Exon2)

<400>  6
gcttcatgcc aattctttcc agagca                                            26


<210>  7
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  5' primer - fusion variant 2 (PTPRK Exon7 - Rspo3 Exon2)

<400>  7
tgcagtcaat gctccaactt acaaattatg                                        30


<210>  8
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  3' primer - fusion variant 2 (PTPRK Exon7 - Rspo3 Exon2)

<400>  8
gcttcatgcc aattctttcc agagca                                            26


<210>  9
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  5' primer - Rspo3- PTPRK fusion variant 1 (PTPRK Exon1 - Rspo3 
       Exon2)

<400>  9
aaactcggca tggatacgac tgcg                                              24


<210>  10
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  3' primer - Rspo3- PTPRK fusion variant 1 (PTPRK Exon1 - Rspo3 
       Exon2)

<400>  10
gcttcatgcc aattctttcc agagca                                            26


<210>  11
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  5' primer - Rspo3- PTPRK fusion variant 2 (PTPRK Exon7 - Rspo3 
       Exon2)

<400>  11
tgcagtcaat gctccaactt acaaattatg                                        30


<210>  12
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  3' primer - Rspo3- PTPRK fusion variant 2 (PTPRK Exon7 - Rspo3 
       Exon2)

<400>  12
gcttcatgcc aattctttcc agagca                                            26


<210>  13
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  5' primer - Rspo2- EIF3E fusion variant 1 (EIF3E Exon1 - Rspo2 
       Exon2)

<400>  13
actactcgca tcgcgcactt t                                                 21


<210>  14
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  3' primer - Rspo2- EIF3E fusion variant 1 (EIF3E Exon1 - Rspo2 
       Exon2)

<400>  14
gggaggactc agagggagac                                                   20


<210>  15
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  5' primer - Rspo2- EIF3E fusion variant 2 (EIF3E Exon1 - Rspo2 
       Exon3)

<400>  15
actactcgca tcgcgcactt t                                                 21


<210>  16
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  3' primer - Rspo2- EIF3E fusion variant 2 (EIF3E Exon1 - Rspo2 
       Exon3)

<400>  16
tgcaggcact ctccatactg                                                   20


<210>  17
<211>  226
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  PCR product of Colorectal Tumor Model #1 with PTPRK (e1) - Rspo3 
       (e2) fusion

<400>  17
aaactcggca tggatacgac tgcggcggcg gcgctgcctg cttttgtggc gctcttgctc       60

ctctctcctt ggcctctcct gggatcggcc caaggccagt tctccgcagt gcatcctaac      120

gttagtcaag gctgccaagg aggctgtgca acatgctcag attacaatgg atgtttgtca      180

tgtaagccca gactattttt tgctctggaa agaattggca tgaagc                     226


<210>  18
<211>  257
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  PCR Product of Colorectal Tumor Model #5 with PTPRK (e7) -Rspo3 
       (e2) fusion

<400>  18
tgcagtcaat gctccaactt acaaattatg gcatttagat ccagataccg aatatgagat       60

ccgagttcta cttacaagac ctggtgaagg tggaacgggg ctcccaggac ctccactaat      120

caccagaaca aaatgtgcag tgcatcctaa cgttagtcaa ggctgccaag gaggctgtgc      180

aacatgctca gattacaatg gatgtttgtc atgtaagccc agactatttt ttgctctgga      240

aagaattggc atgaagc                                                     257


<210>  19
<211>  226
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RT-PCR product of gastric tumor model #G10 and liver tumor model 
       #L2 and #L8 with gene fusion between PTPRK and Rspo3.

<400>  19
aaactcggca tggatacgac tgcggcggcg gcgctgcctg cttttgtggc gctcttgctc       60

ctctctcctt ggcctctcct gggatcggcc caaggccagt tctccgcagt gcatcctaac      120

gttagtcaag gctgccaagg aggctgtgca acatgctcag attacaatgg atgtttgtca      180

tgtaagccca gactattttt tgctctggaa agaattggca tgaagc                     226


<210>  20
<211>  257
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RT-PCR product of esophageal tumor model #E7 with gene fusion 
       between PTPRK and Rspo3.

<400>  20
tgcagtcaat gctccaactt acaaattatg gcatttagat ccagataccg aatatgagat       60

ccgagttcta cttacaagac ctggtgaagg tggaacgggg ctcccaggac ctccactaat      120

caccagaaca aaatgtgcag tgcatcctaa cgttagtcaa ggctgccaag gaggctgtgc      180

aacatgctca gattacaatg gatgtttgtc atgtaagccc agactatttt ttgctctgga      240

aagaattggc atgaagc                                                     257


<210>  21
<211>  155
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RT-PCR product of liver tumor model #L7 with gene fusion between 
       exon 1 of EIF3E and exon 2 of Rspo2.

<400>  21
actactcgca tcgcgcactt tttggatcgg catctagtct ttccgcttct tgaatttctc       60

tctgtaaagg aggttcgtgg cggagagatg ctgatcgcgc tgaactgacc ggtgcggccc      120

gggggtgagt ggcgagtctc cctctgagtc ctccc                                 155


<210>  22
<211>  205
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RT-PCR product of gastric tumor models #G6 and #G13 and liver 
       tumor model #L6 with gene fusion between exon 1 of EIF3E and exon
       3 of Rspo2.

<400>  22
actactcgca tcgcgcactt tttggatcgg catctagtct ttccgcttct tgaatttctc       60

tctgtaaagg agctagttat gtatcaaatc ccatttgcaa gggttgtttg tcttgttcaa      120

aggacaatgg gtgtagccga tgtcaacaga agttgttctt cttccttcga agagaaggga      180

tgcgccagta tggagagtgc ctgca                                            205


