                         SEQUENCE LISTING

<110>  LanzaTech New Zealand Limited
 
<120>  Recombinant Microorganisms and Methods of Use Thereof

<130>  LT90US1

<140>  PCT/US14/55318
<141>  2014-09-12

<150>  US 61/877,272
<151>  2013-09-12

<160>  58    

<170>  PatentIn version 3.5

<210>  1
<211>  3418
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Nucleic acid sequence of plasmid pMK-RQ-Hs-tk

<400>  1
ctaaattgta agcgttaata ttttgttaaa attcgcgtta aatttttgtt aaatcagctc       60

attttttaac caataggccg aaatcggcaa aatcccttat aaatcaaaag aatagaccga      120

gatagggttg agtggccgct acagggcgct cccattcgcc attcaggctg cgcaactgtt      180

gggaagggcg tttcggtgcg ggcctcttcg ctattacgcc agctggcgaa agggggatgt      240

gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg ttgtaaaacg      300

acggccagtg agcgcgacgt aatacgactc actatagggc gaattgaagg aaggccgtca      360

aggccgcatc atatggcttc gtacccctgc catcaacacg cgtctgcgtt cgaccaggct      420

gcgcgttctc gcggccatag caaccgacgt acggcgttgc gccctcgccg gcagcaagaa      480

gccacggaag tccgcccgga gcagaaaatg cccacgctac tgcgggttta tatagacggt      540

ccccacggga tggggaaaac caccaccacg caactgctgg tggccctggg ttcgcgcgac      600

gatatcgtct acgtacccga gccgatgact tactggcggg tgctgggggc ttccgagaca      660

atcgcgaaca tctacaccac acaacaccgc ctcgaccagg gtgagatatc ggccggggac      720

gcggcggtgg taatgacaag cgcccagata acaatgggca tgccttatgc cgtgaccgac      780

gccgttctgg ctcctcatat cgggggggag gctgggagct cacatgcccc gcccccggcc      840

ctcaccctca tcttcgaccg ccatcccatc gccgccctcc tgtgctaccc ggccgcgcgg      900

taccttatgg gcagcatgac cccccaggcc gtgctggcgt tcgtggccct catcccgccg      960

accttgcccg gcacaaacat cgtgttgggg gcccttccgg aggacagaca catcgaccgc     1020

ctggccaaac gccagcgccc cggtgagcgg cttgacctgg ctatgctggc cgcgattcgc     1080

cgcgtttacg ggctacttgc caatacggtg cggtatctgc agtgcggcgg gtcgtggcgg     1140

gaggattggg gacagctttc gggagcggcc ttgacgcccc agggtgccga gccccagagc     1200

aacgcgggcc cacgacccca tatcggggaa acgttattta ccctgtttcg ggcccccgag     1260

ttgctggccc ccaacggcga cctgtacaac gtgtttgcct gggccttgga cgtcttggcc     1320

aaacgcctcc gtcccatgca cgtctttatc ctggattacg accaatcgcc cgccggctgc     1380

cgggacgccc tgctgcaact tacctccggg atggtccaga cccatgtcac caccccaggc     1440

tccataccga cgatctgcga cctggcgcgc acgtttgccc gggagatggg ggaggctcac     1500

tgagctagcc tgggcctcat gggccttcct ttcactgccc gctttccagt cgggaaacct     1560

gtcgtgccag ctgcattaac atggtcatag ctgtttcctt gcgtattggg cgctctccgc     1620

ttcctcgctc actgactcgc tgcgctcggt cgttcgggta aagcctgggg tgcctaatga     1680

gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg cgttgctggc gtttttccat     1740

aggctccgcc cccctgacga gcatcacaaa aatcgacgct caagtcagag gtggcgaaac     1800

ccgacaggac tataaagata ccaggcgttt ccccctggaa gctccctcgt gcgctctcct     1860

gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg aagcgtggcg     1920

ctttctcata gctcacgctg taggtatctc agttcggtgt aggtcgttcg ctccaagctg     1980

ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg ccttatccgg taactatcgt     2040

cttgagtcca acccggtaag acacgactta tcgccactgg cagcagccac tggtaacagg     2100

attagcagag cgaggtatgt aggcggtgct acagagttct tgaagtggtg gcctaactac     2160

ggctacacta gaagaacagt atttggtatc tgcgctctgc tgaagccagt taccttcgga     2220

aaaagagttg gtagctcttg atccggcaaa caaaccaccg ctggtagcgg tggttttttt     2280

gtttgcaagc agcagattac gcgcagaaaa aaaggatctc aagaagatcc tttgatcttt     2340

tctacggggt ctgacgctca gtggaacgaa aactcacgtt aagggatttt ggtcatgaga     2400

ttatcaaaaa ggatcttcac ctagatcctt ttaaattaaa aatgaagttt taaatcaatc     2460

taaagtatat atgagtaaac ttggtctgac agttattaga aaaattcatc cagcagacga     2520

taaaacgcaa tacgctggct atccggtgcc gcaatgccat acagcaccag aaaacgatcc     2580

gcccattcgc cgcccagttc ttccgcaata tcacgggtgg ccagcgcaat atcctgataa     2640

cgatccgcca cgcccagacg gccgcaatca ataaagccgc taaaacggcc attttccacc     2700

ataatgttcg gcaggcacgc atcaccatgg gtcaccacca gatcttcgcc atccggcatg     2760

ctcgctttca gacgcgcaaa cagctctgcc ggtgccaggc cctgatgttc ttcatccaga     2820

tcatcctgat ccaccaggcc cgcttccata cgggtacgcg cacgttcaat acgatgtttc     2880

gcctgatgat caaacggaca ggtcgccggg tccagggtat gcagacgacg catggcatcc     2940

gccataatgc tcactttttc tgccggcgcc agatggctag acagcagatc ctgacccggc     3000

acttcgccca gcagcagcca atcacggccc gcttcggtca ccacatccag caccgccgca     3060

cacggaacac cggtggtggc cagccagctc agacgcgccg cttcatcctg cagctcgttc     3120

agcgcaccgc tcagatcggt tttcacaaac agcaccggac gaccctgcgc gctcagacga     3180

aacaccgccg catcagagca gccaatggtc tgctgcgccc aatcatagcc aaacagacgt     3240

tccacccacg ctgccgggct acccgcatgc aggccatcct gttcaatcat actcttcctt     3300

tttcaatatt attgaagcat ttatcagggt tattgtctca tgagcggata catatttgaa     3360

tgtatttaga aaaataaaca aataggggtt ccgcgcacat ttccccgaaa agtgccac       3418


<210>  2
<211>  5821
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Nucleic acid sequence of plasmid pMTL83155-Hs-tk

<400>  2
cctgcaggat aaaaaaattg tagataaatt ttataaaata gttttatcta caattttttt       60

atcaggaaac agctatgacc gcggccgcaa tatgatattt atgtccattg tgaaagggat      120

tatattcaac tattattcca gttacgttca tagaaatttt cctttctaaa atattttatt      180

ccatgtcaag aactctgttt atttcattaa agaactataa gtacaaagta taaggcattt      240

gaaaaaatag gctagtatat tgattgatta tttattttaa aatgcctaag tgaaatatat      300

acatattata acaataaaat aagtattagt gtaggatttt taaatagagt atctattttc      360

agattaaatt tttgattatt tgatttacat tatataatat tgagtaaagt attgactagc      420

aaaatttttt gatactttaa tttgtgaaat ttcttatcaa aagttatatt tttgaataat      480

ttttattgaa aaatacaact aaaaaggatt atagtataag tgtgtgtaat tttgtgttaa      540

atttaaaggg aggaaatgaa catgaaacat atggcttcgt acccctgcca tcaacacgcg      600

tctgcgttcg accaggctgc gcgttctcgc ggccatagca accgacgtac ggcgttgcgc      660

cctcgccggc agcaagaagc cacggaagtc cgcccggagc agaaaatgcc cacgctactg      720

cgggtttata tagacggtcc ccacgggatg gggaaaacca ccaccacgca actgctggtg      780

gccctgggtt cgcgcgacga tatcgtctac gtacccgagc cgatgactta ctggcgggtg      840

ctgggggctt ccgagacaat cgcgaacatc tacaccacac aacaccgcct cgaccagggt      900

gagatatcgg ccggggacgc ggcggtggta atgacaagcg cccagataac aatgggcatg      960

ccttatgccg tgaccgacgc cgttctggct cctcatatcg ggggggaggc tgggagctca     1020

catgccccgc ccccggccct caccctcatc ttcgaccgcc atcccatcgc cgccctcctg     1080

tgctacccgg ccgcgcggta ccttatgggc agcatgaccc cccaggccgt gctggcgttc     1140

gtggccctca tcccgccgac cttgcccggc acaaacatcg tgttgggggc ccttccggag     1200

gacagacaca tcgaccgcct ggccaaacgc cagcgccccg gtgagcggct tgacctggct     1260

atgctggccg cgattcgccg cgtttacggg ctacttgcca atacggtgcg gtatctgcag     1320

tgcggcgggt cgtggcggga ggattgggga cagctttcgg gagcggcctt gacgccccag     1380

ggtgccgagc cccagagcaa cgcgggccca cgaccccata tcggggaaac gttatttacc     1440

ctgtttcggg cccccgagtt gctggccccc aacggcgacc tgtacaacgt gtttgcctgg     1500

gccttggacg tcttggccaa acgcctccgt cccatgcacg tctttatcct ggattacgac     1560

caatcgcccg ccggctgccg ggacgccctg ctgcaactta cctccgggat ggtccagacc     1620

catgtcacca ccccaggctc cataccgacg atctgcgacc tggcgcgcac gtttgcccgg     1680

gagatggggg aggctcactg agctagcata aaaataagaa gcctgcattt gcaggcttct     1740

tatttttatg gcgcgccgcc attatttttt tgaacaattg acaattcatt tcttattttt     1800

tattaagtga tagtcaaaag gcataacagt gctgaataga aagaaattta cagaaaagaa     1860

aattatagaa tttagtatga ttaattatac tcatttatga atgtttaatt gaatacaaaa     1920

aaaaatactt gttatgtatt caattacggg ttaaaatata gacaagttga aaaatttaat     1980

aaaaaaataa gtcctcagct cttatatatt aagctaccaa cttagtatat aagccaaaac     2040

ttaaatgtgc taccaacaca tcaagccgtt agagaactct atctatagca atatttcaaa     2100

tgtaccgaca tacaagagaa acattaacta tatatattca atttatgaga ttatcttaac     2160

agatataaat gtaaattgca ataagtaaga tttagaagtt tatagccttt gtgtattgga     2220

agcagtacgc aaaggctttt ttatttgata aaaattagaa gtatatttat tttttcataa     2280

ttaatttatg aaaatgaaag ggggtgagca aagtgacaga ggaaagcagt atcttatcaa     2340

ataacaaggt attagcaata tcattattga ctttagcagt aaacattatg acttttatag     2400

tgcttgtagc taagtagtac gaaaggggga gctttaaaaa gctccttgga atacatagaa     2460

ttcataaatt aatttatgaa aagaagggcg tatatgaaaa cttgtaaaaa ttgcaaagag     2520

tttattaaag atactgaaat atgcaaaata cattcgttga tgattcatga taaaacagta     2580

gcaacctatt gcagtaaata caatgagtca agatgtttac ataaagggaa agtccaatgt     2640

attaattgtt caaagatgaa ccgatatgga tggtgtgcca taaaaatgag atgttttaca     2700

gaggaagaac agaaaaaaga acgtacatgc attaaatatt atgcaaggag ctttaaaaaa     2760

gctcatgtaa agaagagtaa aaagaaaaaa taatttattt attaatttaa tattgagagt     2820

gccgacacag tatgcactaa aaaatatatc tgtggtgtag tgagccgata caaaaggata     2880

gtcactcgca ttttcataat acatcttatg ttatgattat gtgtcggtgg gacttcacga     2940

cgaaaaccca caataaaaaa agagttcggg gtagggttaa gcatagttga ggcaactaaa     3000

caatcaagct aggatatgca gtagcagacc gtaaggtcgt tgtttaggtg tgttgtaata     3060

catacgctat taagatgtaa aaatacggat accaatgaag ggaaaagtat aatttttgga     3120

tgtagtttgt ttgttcatct atgggcaaac tacgtccaaa gccgtttcca aatctgctaa     3180

aaagtatatc ctttctaaaa tcaaagtcaa gtatgaaatc ataaataaag tttaattttg     3240

aagttattat gatattatgt ttttctatta aaataaatta agtatataga atagtttaat     3300

aatagtatat acttaatgtg ataagtgtct gacagtgtca cagaaaggat gattgttatg     3360

gattataagc ggccggccag tgggcaagtt gaaaaattca caaaaatgtg gtataatatc     3420

tttgttcatt agagcgataa acttgaattt gagagggaac ttagatggta tttgaaaaaa     3480

ttgataaaaa tagttggaac agaaaagagt attttgacca ctactttgca agtgtacctt     3540

gtacctacag catgaccgtt aaagtggata tcacacaaat aaaggaaaag ggaatgaaac     3600

tatatcctgc aatgctttat tatattgcaa tgattgtaaa ccgccattca gagtttagga     3660

cggcaatcaa tcaagatggt gaattgggga tatatgatga gatgatacca agctatacaa     3720

tatttcacaa tgatactgaa acattttcca gcctttggac tgagtgtaag tctgacttta     3780

aatcattttt agcagattat gaaagtgata cgcaacggta tggaaacaat catagaatgg     3840

aaggaaagcc aaatgctccg gaaaacattt ttaatgtatc tatgataccg tggtcaacct     3900

tcgatggctt taatctgaat ttgcagaaag gatatgatta tttgattcct atttttacta     3960

tggggaaata ttataaagaa gataacaaaa ttatacttcc tttggcaatt caagttcatc     4020

acgcagtatg tgacggattt cacatttgcc gttttgtaaa cgaattgcag gaattgataa     4080

atagttaact tcaggtttgt ctgtaactaa aaacaagtat ttaagcaaaa acatcgtaga     4140

aatacggtgt tttttgttac cctaagttta aactcctttt tgataatctc atgaccaaaa     4200

tcccttaacg tgagttttcg ttccactgag cgtcagaccc cgtagaaaag atcaaaggat     4260

cttcttgaga tccttttttt ctgcgcgtaa tctgctgctt gcaaacaaaa aaaccaccgc     4320

taccagcggt ggtttgtttg ccggatcaag agctaccaac tctttttccg aaggtaactg     4380

gcttcagcag agcgcagata ccaaatactg ttcttctagt gtagccgtag ttaggccacc     4440

acttcaagaa ctctgtagca ccgcctacat acctcgctct gctaatcctg ttaccagtgg     4500

ctgctgccag tggcgataag tcgtgtctta ccgggttgga ctcaagacga tagttaccgg     4560

ataaggcgca gcggtcgggc tgaacggggg gttcgtgcac acagcccagc ttggagcgaa     4620

cgacctacac cgaactgaga tacctacagc gtgagctatg agaaagcgcc acgcttcccg     4680

aagggagaaa ggcggacagg tatccggtaa gcggcagggt cggaacagga gagcgcacga     4740

gggagcttcc agggggaaac gcctggtatc tttatagtcc tgtcgggttt cgccacctct     4800

gacttgagcg tcgatttttg tgatgctcgt caggggggcg gagcctatgg aaaaacgcca     4860

gcaacgcggc ctttttacgg ttcctggcct tttgctggcc ttttgctcac atgttctttc     4920

ctgcgttatc ccctgattct gtggataacc gtattaccgc ctttgagtga gctgataccg     4980

ctcgccgcag ccgaacgacc gagcgcagcg agtcagtgag cgaggaagcg gaagagcgcc     5040

caatacgcag ggccccctgc ttcggggtca ttatagcgat tttttcggta tatccatcct     5100

ttttcgcacg atatacagga ttttgccaaa gggttcgtgt agactttcct tggtgtatcc     5160

aacggcgtca gccgggcagg ataggtgaag taggcccacc cgcgagcggg tgttccttct     5220

tcactgtccc ttattcgcac ctggcggtgc tcaacgggaa tcctgctctg cgaggctggc     5280

cggctaccgc cggcgtaaca gatgagggca agcggatggc tgatgaaacc aagccaacca     5340

ggaagggcag cccacctatc aaggtgtact gccttccaga cgaacgaaga gcgattgagg     5400

aaaaggcggc ggcggccggc atgagcctgt cggcctacct gctggccgtc ggccagggct     5460

acaaaatcac gggcgtcgtg gactatgagc acgtccgcga gctggcccgc atcaatggcg     5520

acctgggccg cctgggcggc ctgctgaaac tctggctcac cgacgacccg cgcacggcgc     5580

ggttcggtga tgccacgatc ctcgccctgc tggcgaagat cgaagagaag caggacgagc     5640

ttggcaaggt catgatgggc gtggtccgcc cgagggcaga gccatgactt ttttagccgc     5700

taaaacggcc ggggggtgcg cgtgattgcc aagcacgtcc ccatgcgctc catcaagaag     5760

agcgacttcg cggagctggt gaagtacatc accgacgagc aaggcaagac cgatcgggcc     5820

c                                                                     5821


<210>  3
<211>  4949
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Nucleic acid sequence of plasmid pMTL83155

<400>  3
cctgcaggat aaaaaaattg tagataaatt ttataaaata gttttatcta caattttttt       60

atcaggaaac agctatgacc gcggccgcaa tatgatattt atgtccattg tgaaagggat      120

tatattcaac tattattcca gttacgttca tagaaatttt cctttctaaa atattttatt      180

ccatgtcaag aactctgttt atttcattaa agaactataa gtacaaagta taaggcattt      240

gaaaaaatag gctagtatat tgattgatta tttattttaa aatgcctaag tgaaatatat      300

acatattata acaataaaat aagtattagt gtaggatttt taaatagagt atctattttc      360

agattaaatt tttgattatt tgatttacat tatataatat tgagtaaagt attgactagc      420

aaaatttttt gatactttaa tttgtgaaat ttcttatcaa aagttatatt tttgaataat      480

ttttattgaa aaatacaact aaaaaggatt atagtataag tgtgtgtaat tttgtgttaa      540

atttaaaggg aggaaatgaa catgaaacat atgaccatga ttacgaattc gagctcggta      600

cccggggatc ctctagagtc gacgtcacgc gtccatggag atctcgaggc ctgcagacat      660

gcaagcttgg cactggccgt cgttttacaa cgtcgtgact gggaaaaccc tggcgttacc      720

caacttaatc gccttgcagc acatccccct ttcgccagct ggcgtaatag cgaagaggcc      780

cgcaccgatc gcccttccca acagttgcgc agcctgaatg gcgaatggcg ctagcataaa      840

aataagaagc ctgcatttgc aggcttctta tttttatggc gcgccgccat tatttttttg      900

aacaattgac aattcatttc ttatttttta ttaagtgata gtcaaaaggc ataacagtgc      960

tgaatagaaa gaaatttaca gaaaagaaaa ttatagaatt tagtatgatt aattatactc     1020

atttatgaat gtttaattga atacaaaaaa aaatacttgt tatgtattca attacgggtt     1080

aaaatataga caagttgaaa aatttaataa aaaaataagt cctcagctct tatatattaa     1140

gctaccaact tagtatataa gccaaaactt aaatgtgcta ccaacacatc aagccgttag     1200

agaactctat ctatagcaat atttcaaatg taccgacata caagagaaac attaactata     1260

tatattcaat ttatgagatt atcttaacag atataaatgt aaattgcaat aagtaagatt     1320

tagaagttta tagcctttgt gtattggaag cagtacgcaa aggctttttt atttgataaa     1380

aattagaagt atatttattt tttcataatt aatttatgaa aatgaaaggg ggtgagcaaa     1440

gtgacagagg aaagcagtat cttatcaaat aacaaggtat tagcaatatc attattgact     1500

ttagcagtaa acattatgac ttttatagtg cttgtagcta agtagtacga aagggggagc     1560

tttaaaaagc tccttggaat acatagaatt cataaattaa tttatgaaaa gaagggcgta     1620

tatgaaaact tgtaaaaatt gcaaagagtt tattaaagat actgaaatat gcaaaataca     1680

ttcgttgatg attcatgata aaacagtagc aacctattgc agtaaataca atgagtcaag     1740

atgtttacat aaagggaaag tccaatgtat taattgttca aagatgaacc gatatggatg     1800

gtgtgccata aaaatgagat gttttacaga ggaagaacag aaaaaagaac gtacatgcat     1860

taaatattat gcaaggagct ttaaaaaagc tcatgtaaag aagagtaaaa agaaaaaata     1920

atttatttat taatttaata ttgagagtgc cgacacagta tgcactaaaa aatatatctg     1980

tggtgtagtg agccgataca aaaggatagt cactcgcatt ttcataatac atcttatgtt     2040

atgattatgt gtcggtggga cttcacgacg aaaacccaca ataaaaaaag agttcggggt     2100

agggttaagc atagttgagg caactaaaca atcaagctag gatatgcagt agcagaccgt     2160

aaggtcgttg tttaggtgtg ttgtaataca tacgctatta agatgtaaaa atacggatac     2220

caatgaaggg aaaagtataa tttttggatg tagtttgttt gttcatctat gggcaaacta     2280

cgtccaaagc cgtttccaaa tctgctaaaa agtatatcct ttctaaaatc aaagtcaagt     2340

atgaaatcat aaataaagtt taattttgaa gttattatga tattatgttt ttctattaaa     2400

ataaattaag tatatagaat agtttaataa tagtatatac ttaatgtgat aagtgtctga     2460

cagtgtcaca gaaaggatga ttgttatgga ttataagcgg ccggccagtg ggcaagttga     2520

aaaattcaca aaaatgtggt ataatatctt tgttcattag agcgataaac ttgaatttga     2580

gagggaactt agatggtatt tgaaaaaatt gataaaaata gttggaacag aaaagagtat     2640

tttgaccact actttgcaag tgtaccttgt acctacagca tgaccgttaa agtggatatc     2700

acacaaataa aggaaaaggg aatgaaacta tatcctgcaa tgctttatta tattgcaatg     2760

attgtaaacc gccattcaga gtttaggacg gcaatcaatc aagatggtga attggggata     2820

tatgatgaga tgataccaag ctatacaata tttcacaatg atactgaaac attttccagc     2880

ctttggactg agtgtaagtc tgactttaaa tcatttttag cagattatga aagtgatacg     2940

caacggtatg gaaacaatca tagaatggaa ggaaagccaa atgctccgga aaacattttt     3000

aatgtatcta tgataccgtg gtcaaccttc gatggcttta atctgaattt gcagaaagga     3060

tatgattatt tgattcctat ttttactatg gggaaatatt ataaagaaga taacaaaatt     3120

atacttcctt tggcaattca agttcatcac gcagtatgtg acggatttca catttgccgt     3180

tttgtaaacg aattgcagga attgataaat agttaacttc aggtttgtct gtaactaaaa     3240

acaagtattt aagcaaaaac atcgtagaaa tacggtgttt tttgttaccc taagtttaaa     3300

ctcctttttg ataatctcat gaccaaaatc ccttaacgtg agttttcgtt ccactgagcg     3360

tcagaccccg tagaaaagat caaaggatct tcttgagatc ctttttttct gcgcgtaatc     3420

tgctgcttgc aaacaaaaaa accaccgcta ccagcggtgg tttgtttgcc ggatcaagag     3480

ctaccaactc tttttccgaa ggtaactggc ttcagcagag cgcagatacc aaatactgtt     3540

cttctagtgt agccgtagtt aggccaccac ttcaagaact ctgtagcacc gcctacatac     3600

ctcgctctgc taatcctgtt accagtggct gctgccagtg gcgataagtc gtgtcttacc     3660

gggttggact caagacgata gttaccggat aaggcgcagc ggtcgggctg aacggggggt     3720

tcgtgcacac agcccagctt ggagcgaacg acctacaccg aactgagata cctacagcgt     3780

gagctatgag aaagcgccac gcttcccgaa gggagaaagg cggacaggta tccggtaagc     3840

ggcagggtcg gaacaggaga gcgcacgagg gagcttccag ggggaaacgc ctggtatctt     3900

tatagtcctg tcgggtttcg ccacctctga cttgagcgtc gatttttgtg atgctcgtca     3960

ggggggcgga gcctatggaa aaacgccagc aacgcggcct ttttacggtt cctggccttt     4020

tgctggcctt ttgctcacat gttctttcct gcgttatccc ctgattctgt ggataaccgt     4080

attaccgcct ttgagtgagc tgataccgct cgccgcagcc gaacgaccga gcgcagcgag     4140

tcagtgagcg aggaagcgga agagcgccca atacgcaggg ccccctgctt cggggtcatt     4200

atagcgattt tttcggtata tccatccttt ttcgcacgat atacaggatt ttgccaaagg     4260

gttcgtgtag actttccttg gtgtatccaa cggcgtcagc cgggcaggat aggtgaagta     4320

ggcccacccg cgagcgggtg ttccttcttc actgtccctt attcgcacct ggcggtgctc     4380

aacgggaatc ctgctctgcg aggctggccg gctaccgccg gcgtaacaga tgagggcaag     4440

cggatggctg atgaaaccaa gccaaccagg aagggcagcc cacctatcaa ggtgtactgc     4500

cttccagacg aacgaagagc gattgaggaa aaggcggcgg cggccggcat gagcctgtcg     4560

gcctacctgc tggccgtcgg ccagggctac aaaatcacgg gcgtcgtgga ctatgagcac     4620

gtccgcgagc tggcccgcat caatggcgac ctgggccgcc tgggcggcct gctgaaactc     4680

tggctcaccg acgacccgcg cacggcgcgg ttcggtgatg ccacgatcct cgccctgctg     4740

gcgaagatcg aagagaagca ggacgagctt ggcaaggtca tgatgggcgt ggtccgcccg     4800

agggcagagc catgactttt ttagccgcta aaacggccgg ggggtgcgcg tgattgccaa     4860

gcacgtcccc atgcgctcca tcaagaagag cgacttcgcg gagctggtga agtacatcac     4920

cgacgagcaa ggcaagaccg atcgggccc                                       4949


<210>  4
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  4
aagaagggcg tatatgaaaa cttgt                                             25


<210>  5
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  5
ttcgtttaca aaacggcaaa tgtga                                             25


<210>  6
<211>  37
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  6
ccgaattcgt cgacaacaga gtttgatcct ggctcag                                37


<210>  7
<211>  37
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  7
cccgggatcc aagcttacgg ctaccttgtt acgactt                                37


<210>  8
<211>  1207
<212>  DNA
<213>  Artificial sequence

<220>
<223>  16s rRNA nucleic acid sequence of LZ-pMTL83155-1 obtained using 
       primer rP2 (PCR product of plasmid)

<400>  8
cskmmtwwyr mwwkrammkt myyswawkrw mkkkrmkkss yggygttwac aaggcccggg       60

aacgtattca ccgcgacatt ctgattcgcg attactagca actccacttc atgtaggcga      120

gtttcagcct gcaatccgaa ctgggggcag tttttgaggt ttgctccacc ttgcggtctt      180

gcttctctct gtactgccca ttgtagcacg tgtgttgccc tggacataag gggcatgatg      240

atttgacgtc atccccacct tcctccgcgt taaccgcggc agtcttgcta gagtgctcaa      300

ctaaatgtta gcaactaaca acaggggttg sgctcgttgc aggacttaac ctaacatctc      360

acgacacgag ctgacgacaa ccatgcacca cctgtatccc tgccccgaag ggcttctctt      420

atctctaara tattcagggk atgtcaagtc caggwaaggt tsttcgcgtt gcttcsaatt      480

aaacmacatg ctccgctgct tgtgsgggcc sccstcaatt cctttgagtt ttaatcwtgc      540

gatcgtactt cccaggcgga gtactwattg tgtttactgc ggcacagaar aggkcgatam      600

ctcctacacc tartactcat cgtttacggc gtggastacc aggrtakcta atcctgtttg      660

ctacccacgc tttcgtgcct sakcrtcagt tacggtccas araatcgcct tcgccactgg      720

tgttsttyct aatstctacg cayytywycg ckacactarr aattmmattc tcctctcccg      780

crctctagat atccagttwg aaatgmastg mccgrgttaa gsssggsyat ttcacatctc      840

actyaatakc tgmctacgca ctctytacgc ccastaatyy ggacwksrct cgccyctacg      900

tattamyrwr rctgctggca cgtmgtagcg wgactsctsc ttgsgtacgt catatcgtcc      960

ycwmgacaga gcwkacatck aaacawcgtc acycmcscgc gtgctgcatc agywtmgmyc     1020

atstgcamaa tacmsacwgc tgcyccgtag agtytggaar grgkkycrat catkmrccga     1080

taccsktcca gwccgckryc caaygtgcct gtaggcgtac trcacgwgct atgcccgrga     1140

cactcacgga atcmcgtacg tcaggaactg aattwgggta tcattcggaw gccgtggrga     1200

rtacmgg                                                               1207


<210>  9
<211>  1179
<212>  DNA
<213>  Artificial sequence

<220>
<223>  16s rRNA nucleic acid sequence of LZ-pMTL83155-2 obtained using 
       primer rP2 (PCR product of plasmid)

<400>  9
tskkksyrrk syytgmrtrk rykswyawtk gcccgggaac wkattcaccg cgacattctg       60

attcgcgatt actagcaact ccaacttcat gtaggcgagt ttcagcctgc aatccgaact      120

gggggcagtt tttgaggttt gctccacctt gcggtcttgc ttctctctgt actgcccatt      180

gtagcacgtg tgttgccctg gacataaggg gcatgatgat ttgacgtcat ccccaccttc      240

ctccgcgtta accgcggcag tcttgctaga gtgctcaact aaatgttagc aactaacaac      300

aggggttgsg ctcgttgcag gacttaacct aacatctcac gacacgagct gacgacaacc      360

atgcaccacc tgtatccctg ccccgaaggg sttctcttat ctctaarata ttcagggtat      420

gtcaagtcca ggwaaggtts ttcgcgttgc ttckaattaa acmacatgct ccgctgcttg      480

tgsgggcscc cgtcaattcc tttgagtttt aatcwtgsga tcgtacttcc yasgsggagt      540

amttattgwg tttactgcgg cacagaargr gkcgatacct cctacamcwa stactcrtcg      600

twtacggcgt ggaskaccag grtakmwaat cmtgtttgct acccacgctt tcktgccksa      660

kcrtcartta cggtccasar satcgcctwc gccactggtg ttsttyctaa trtctacgca      720

yctcaccgct rcactargaa wtmmawtctm ctcyccckcr skmkaratat mcasttwgwa      780

awrmarygms sgggttrwgs rsggssryyt cayatctcam ttaaatatst gmctacscac      840

kcmytmcgcs caryaattyy kgacwgmrcr mgccycsyac gtattaywww agmtgmwrgc      900

mcgymgktag cggwgwrkrc mtcckyktgg tascktsaty atcgtcyccw mgammarrsw      960

kwryawwstt aacmtmstma mtccsyawcg ttgstgrtca gtgcttwswy atstgcacaa     1020

twcwrmmwgm tgcyccgtas agtytggamr trttgaawca tywrcctats rcgckycagt     1080

cggkcacacg tgcttgawkg cgttrctkac rcmgtcaacg mctgagcakc acgrgcctga     1140

ggakcmgtca accgmtatgg gatrgatatt mggtatccg                            1179


<210>  10
<211>  1159
<212>  DNA
<213>  Artificial sequence

<220>
<223>  16s rRNA nucleic acid sequence of LZ-pMTL83155-hs-tk-1 obtained 
       using primer rP2 (PCR product of plasmid)

<400>  10
ggktwttggg ccamtkytwc tcattggtrk kgacgggcgg tgtgtacaag gcccgggaac       60

gtattcaccg cgacattctg attcgcgatt actagcaact ccaacttcat gtaggcgagt      120

ttcagcctgc aatccgaact gggggcagtt tttgaggttt gctccacctt gcggtcttgc      180

ttctctctgt actgcccatt gtagcacgtg tgttgccctg gacataaggg gcatgatgat      240

ttgacgtcat ccccaccttc ctccgcgtta accgcggcag tcttgctaga gtgctcaact      300

aaatgttagc aactaacaac aggggttgcg ctcgttgcag gacttaacct aacatctcac      360

gacacgagct gacgacaacc atgcaccacc tgtatccctg ccccgaaggg yttctcttat      420

ctctaagata ttcagggtat gtcaagtcca ggtaaggttc ttcgcgttgc ttcgaattaa      480

acmacatgct ccgctgcttg tgcgggcccc cgtcaattcc tttgagtttt aatcttgcga      540

tcgtacttcc caggcggagt acttattgtg tttactgcgg cacagaargg gtcgatacct      600

cctacaccta gtactcatcg tttacggcgt ggastaccag ggtatctaat cmtgtttgct      660

acccacgctt tcgtgcctca gcgtcagtta cggtccasag aatcgccttc gccactggtg      720

ttsttcctaa tctctacgca yttcaccgct acactaggaa ttccattctc ctctcccgca      780

ctctagatat ccagtttgaa atgcagtgcc sgggttaagc cggsgtattt cacatctcac      840

ttaaatatcy gcctacgcac tctttacgcc cagtaatycg gacasgctcg ccacctacgt      900

attaccgcrg ctgctggcac gtagktagcg kgctkctctt ggtacgtcat tatcgtccca      960

agacagagct tacatckaaa ctctcactcm gcgcgttgct gcatcagytt cgycatgtgc     1020

atatcscact gctgcyccgt agagkytgga cggwsyycat tcatgtgcga tmccktcagt     1080

cgctasccat cgygcctgtr gsttacctac cackagctaw rsscccgrgt cmcycycaac     1140

ggatayccgt kaawcgtcg                                                  1159


<210>  11
<211>  1188
<212>  DNA
<213>  Artificial sequence

<220>
<223>  16s rRNA nucleic acid sequence of LZ-pMTL83155-hs-tk-2 obtained 
       using primer rP2 (PCR product of plasmid)

<400>  11
crcwcwycky rttwwtwmwt wwggtkktga cgggcggtgt gtacaaggcc cgggaacgta       60

ttcaccgcga cattctgatt cgcgattact agcaactcca acttcatgta ggcgagtttc      120

agcctgcaat ccgaactggg ggcagttttt gaggtttgct ccaccttgcg gtcttgcttc      180

tctctgtact gcccattgta gcacgtgtgt tgccctggac ataaggggca tgatgatttg      240

acgtcatccc caccttcctc cgcgttaacc gcggcagtct tgctagagtg ctcaactaaa      300

tgttagcaac taacaacagg ggttgcgctc gttgcaggac ttaacctaac atctcacgac      360

acgagctgac gacaaccatg caccacctgt atccctgccc cgaagggytt ctcttatctc      420

taagatattc agggtatgtc aagtccaggt aaggttcttc gcgttgcttc gaattaaacc      480

acatgctccg ctgcttgtgc gggcccccgt caattccttt gagttttaat cttgcgatcg      540

tacttcccag gcggagtact tattgtgttt actgcggcac agaaggggtc gatacctcct      600

acacctagta ctcatcgttt acggcgtgga ctaccagggt atctaatcct gtttgctacc      660

cacgctttcg tgcctcagcg tcagttacgg tccagagaat cgccttcgcc actggtgttc      720

ttcctaatct ctacgcattt caccgctaca ctaggaattc cattctcctc tcccgcactc      780

tagatatcca gtttgaaatg cagtgcccgg gttaagcccg ggtatttcac atctcactta      840

aatatccgcc tacgcactct ttacgcccag taattccgga caacgctcgc cacctacgta      900

ttaccgcggc tgctggcacg tagttagccg tgcttctcct tggtacgtca tatcgtccca      960

agamgagctt acatccgaaa ctctcactcm gcgcgtgctg catcagcttc gccatgtgca     1020

tatcccactg ctgcyccgta gagtctgacg tyyycatcaa tgtgcgatcm cctctcagtc     1080

gcwmscatcg tsctgtagcg tacctacacw gctatggccg gtcmycycag cgawtccgta     1140

tmgycatgaa cygatatatg cgatkattcc cttcggagca tccccctg                  1188


<210>  12
<211>  1032
<212>  DNA
<213>  Clostridium autoethanogenum

<400>  12
gtgaaaggag agtttaaaat gaaagaagaa ttaaaacaga taaaggaaaa tgcctttaac       60

gaattaaaaa ataaaaagtt agatatagag gatataagag ttaaatattt aggtaaaaag      120

ggagaactta caaaaatact caggggcatg aaggatcttt ccaaagaaga aagacctgca      180

attggtaagc ttgccaatga agtgaggagt acactggaaa atgctataga agaggcatca      240

aaaaagataa aatcaagtgc tatacaagca aagctgcaga atgaaacaat tgatattact      300

atgcctggca taaagcaaac tgtaggaaag cgccatccgc tagaacaaac actagaagag      360

atgaaacaga tatttatttc tatgggattt actatagaag aaggtcctga agtagagaag      420

gattattata actttgaagc acttaacata cctaaaaatc atccagcaag gggtgaacag      480

gatacctttt atataaatga caatgtagtg cttagaactc aaacttctcc aatacaggta      540

agaactatgg aaaaacaaaa acccccaata aagatgatat ctccaggtaa agtttatcgt      600

tcagattcag tggatgctac tcattcacct atattttatc aaatggaagg cctagtagtt      660

gacaaaggta taacttttgc aaatttaaaa ggcactcttg aactatttgc taaaaagtta      720

ttcggaaatg acatacgtac aaaattcaga cctcatcatt tcccttttac agaaccttct      780

gcagaaatgg atgccagttg ctttgtatgc catggaaaag gctgcagagt atgtaaggga      840

gaagggtgga tagaactttt aggatgcgga atggttcatc ctcaggtact tagaaattgt      900

ggaatagatc ctgaagttta tagtggattt gcttttggaa tgggtgtaga taggatggtc      960

atgttaaaat acggaataga tgatataaga aacatgtatg aaagtgacat gagattttta     1020

aatcaatttt aa                                                         1032


<210>  13
<211>  984
<212>  DNA
<213>  Eschericia coli

<400>  13
atgtcacatc tcgcagaact ggttgccagt gcgaaggcgg ccattagcca ggcgtcagat       60

gttgccgcgt tagataatgt gcgcgtcgaa tatttgggta aaaaagggca cttaaccctt      120

cagatgacga ccctgcgtga gctgccgcca gaagagcgtc cggcagctgg tgcggttatc      180

aacgaagcga aagagcaggt tcagcaggcg ctgaatgcgc gtaaagcgga actggaaagc      240

gctgcactga atgcgcgtct ggcggcggaa acgattgatg tctctctgcc aggtcgtcgc      300

attgaaaacg gcggtctgca tccggttacc cgtaccatcg accgtatcga aagtttcttc      360

ggtgagcttg gctttaccgt ggcaaccggg ccggaaatcg aagacgatta tcataacttc      420

gatgctctga acattcctgg tcaccacccg gcgcgcgctg accacgacac tttctggttt      480

gacactaccc gcctgctgcg tacccagacc tctggcgtac agatccgcac catgaaagcc      540

cagcagccac cgattcgtat catcgcgcct ggccgtgttt atcgtaacga ctacgaccag      600

actcacacgc cgatgttcca tcagatggaa ggtctgattg ttgataccaa catcagcttt      660

accaacctga aaggcacgct gcacgacttc ctgcgtaact tctttgagga agatttgcag      720

attcgcttcc gtccttccta cttcccgttt accgaacctt ctgcagaagt ggacgtcatg      780

ggtaaaaacg gtaaatggct ggaagtgctg ggctgcggga tggtgcatcc gaacgtgttg      840

cgtaacgttg gcatcgaccc ggaagtttac tctggtttcg ccttcgggat ggggatggag      900

cgtctgacta tgttgcgtta cggcgtcacc gacctgcgtt cattcttcga aaacgatctg      960

cgtttcctca aacagtttaa ataa                                             984


<210>  14
<211>  1040
<212>  DNA
<213>  Clostridium autoethanogenum

<400>  14
gtgaaaggag agtttaaaat gaaagaagaa ttaaaacaga taaaggaaaa tgcctttaac       60

gaattaaaaa ataaaaagtt agatatagag gatataagag ttaaatattt aggtaaaaag      120

ggagaactta caaaaatact caggggcatg aaggatcttt ccaaagaaga aagacctgca      180

attggtaagc ttgccaatga agtgaggagt acactggaaa atgctataga agaggcatca      240

aaaaagataa aatcaagtgc tatacaagca aagctgcaga atgaaacaat tgatattact      300

atgcctggca taaagcaaac tgtaggaaag cgccatccgc tagaacaaac actagaagag      360

atgaaacaga tatttatttc tatgggattt actatagaag aaggtcctga agtagagaag      420

gattattata actttgaagc acttaacata cctaaaaatc atccagcaag gggtgaacag      480

gatacctttt atataaatga caatgtagtg cttagaactc aaacttctcc aatacaggta      540

agaactatgg aaaaacaaaa acccccaata aagatgatat ctccaggtaa agtttatcgt      600

tcagattcag tggatgctac tcattcacct atattttatc aaatggaagg cctagtagtt      660

gacaaaggta taacttttgc aaatttaaaa ggcactcttg aactatttgc taaaaagtta      720

ttcggaaatg acatacgtac aaaattcaga cctcatcatt tcccttttac agaaccttct      780

gcagaaatgg atgccagttg ctttgtatgc catggaaaag gctgcagagt atgtaaggga      840

gaagggtgga tagaactttt aggatgcgga atggttcatc ctcaggtact tagaaattgt      900

ggaatagatc ctgaagttta tagtggattt ggttttggaa tgggtgtaga taggatggtc      960

atgttaaaat acggaataga tgatataaga aacatgtatg aaagtgacat gagattttta     1020

aatcaatttt aagtttaaac                                                 1040


<210>  15
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  15
actggccgtc gttttaca                                                     18


<210>  16
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  16
caggaaacag ctatgacc                                                     18


<210>  17
<211>  73
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic promoter PpheS*

<400>  17
gtttaaacct ctatattgac aaaaataata atagtgggta taattaagtt gttatagaaa       60

ggaggatgta tag                                                          73


<210>  18
<211>  4835
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Plasmid pMTL85151-pheS*

<400>  18
atgaagtgag gagtacactg gaaaatgcta tagaagaggc atcaaaaaag ataaaatcaa       60

gtgctataca agcaaagctg cagaatgaaa caattgatat tactatgcct ggcataaagc      120

aaactgtagg aaagcgccat ccgctagaac aaacactaga agagatgaaa cagatattta      180

tttctatggg atttactata gaagaaggtc ctgaagtaga gaaggattat tataactttg      240

aagcacttaa catacctaaa aatcatccag caaggggtga acaggatacc ttttatataa      300

atgacaatgt agtgcttaga actcaaactt ctccaataca ggtaagaact atggaaaaac      360

aaaaaccccc aataaagatg atatctccag gtaaagttta tcgttcagat tcagtggatg      420

ctactcattc acctatattt tatcaaatgg aaggcctagt agttgacaaa ggtataactt      480

ttgcaaattt aaaaggcact cttgaactat ttgctaaaaa gttattcgga aatgacatac      540

gtacaaaatt cagacctcat catttccctt ttacagaacc ttctgcagaa atggatgcca      600

gttgctttgt atgccatgga aaaggctgca gagtatgtaa gggagaaggg tggatagaac      660

ttttaggatg cggaatggtt catcctcagg tacttagaaa ttgtggaata gatcctgaag      720

tttatagtgg atttggtttt ggaatgggtg tagataggat ggtcatgtta aaatacggaa      780

tagatgatat aagaaacatg tatgaaagtg acatgagatt tttaaatcaa ttttaagttt      840

aaactccttt ttgataatct catgaccaaa atcccttaac gtgagttttc gttccactga      900

gcgtcagacc ccgtagaaaa gatcaaagga tcttcttgag atcctttttt tctgcgcgta      960

atctgctgct tgcaaacaaa aaaaccaccg ctaccagcgg tggtttgttt gccggatcaa     1020

gagctaccaa ctctttttcc gaaggtaact ggcttcagca gagcgcagat accaaatact     1080

gtccttctag tgtagccgta gttaggccac cacttcaaga actctgtagc accgcctaca     1140

tacctcgctc tgctaatcct gttaccagtg gctgctgcca gtggcgataa gtcgtgtctt     1200

accgggttgg actcaagacg atagttaccg gataaggcgc agcggtcggg ctgaacgggg     1260

ggttcgtgca cacagcccag cttggagcga acgacctaca ccgaactgag atacctacag     1320

cgtgagcatt gagaaagcgc cacgcttccc gaagggagaa aggcggacag gtatccggta     1380

agcggcaggg tcggaacagg agagcgcacg agggagcttc cagggggaaa cgcctggtat     1440

ctttatagtc ctgtcgggtt tcgccacctc tgacttgagc gtcgattttt gtgatgctcg     1500

tcaggggggc ggagcctatg gaaaaacgcc agcaacgcgg cctttttacg gttcctggcc     1560

ttttgctggc cttttgctca catgttcttt cctgcgttat cccctgattc tgtggataac     1620

cgtattaccg cctttgagtg agctgatacc gctcgccgca gccgaacgac cgagcgcagc     1680

gagtcagtga gcgaggaagc ggaagagcgc ccaatacgca gggccccctg cttcggggtc     1740

attatagcga ttttttcggt atatccatcc tttttcgcac gatatacagg attttgccaa     1800

agggttcgtg tagactttcc ttggtgtatc caacggcgtc agccgggcag gataggtgaa     1860

gtaggcccac ccgcgagcgg gtgttccttc ttcactgtcc cttattcgca cctggcggtg     1920

ctcaacggga atcctgctct gcgaggctgg ccggctaccg ccggcgtaac agatgagggc     1980

aagcggatgg ctgatgaaac caagccaacc aggaagggca gcccacctat caaggtgtac     2040

tgccttccag acgaacgaag agcgattgag gaaaaggcgg cggcggccgg catgagcctg     2100

tcggcctacc tgctggccgt cggccagggc tacaaaatca cgggcgtcgt ggactatgag     2160

cacgtccgcg agctggcccg catcaatggc gacctgggcc gcctgggcgg cctgctgaaa     2220

ctctggctca ccgacgaccc gcgcacggcg cggttcggtg atgccacgat cctcgccctg     2280

ctggcgaaga tcgaagagaa gcaggacgag cttggcaagg tcatgatggg cgtggtccgc     2340

ccgagggcag agccatgact tttttagccg ctaaaacggc cggggggtgc gcgtgattgc     2400

caagcacgtc cccatgcgct ccatcaagaa gagcgacttc gcggagctgg tgaagtacat     2460

caccgacgag caaggcaaga ccgatcgggc cccctgcagg ataaaaaaat tgtagataaa     2520

ttttataaaa tagttttatc tacaattttt ttatcaggaa acagctatga ccgcggccgc     2580

tgtatccata tgaccatgat tacgaattcg agctcggtac ccggggatcc tctagagtcg     2640

acgtcacgcg tccatggaga tctcgaggcc tgcagacatg caagcttggc actggccgtc     2700

gttttacaac gtcgtgactg ggaaaaccct ggcgttaccc aacttaatcg ccttgcagca     2760

catccccctt tcgccagctg gcgtaatagc gaagaggccc gcaccgatcg cccttcccaa     2820

cagttgcgca gcctgaatgg cgaatggcgc tagcataaaa ataagaagcc tgcatttgca     2880

ggcttcttat ttttatggcg cgccgcattc acttcttttc tatataaata tgagcgaagc     2940

gaataagcgt cggaaaagca gcaaaaagtt tcctttttgc tgttggagca tgggggttca     3000

gggggtgcag tatctgacgt caatgccgag cgaaagcgag ccgaagggta gcatttacgt     3060

tagataaccc cctgatatgc tccgacgctt tatatagaaa agaagattca actaggtaaa     3120

atcttaatat aggttgagat gataaggttt ataaggaatt tgtttgttct aatttttcac     3180

tcattttgtt ctaatttctt ttaacaaatg ttcttttttt tttagaacag ttatgatata     3240

gttagaatag tttaaaataa ggagtgagaa aaagatgaaa gaaagatatg gaacagtcta     3300

taaaggctct cagaggctca tagacgaaga aagtggagaa gtcatagagg tagacaagtt     3360

ataccgtaaa caaacgtctg gtaacttcgt aaaggcatat atagtgcaat taataagtat     3420

gttagatatg attggcggaa aaaaacttaa aatcgttaac tatatcctag ataatgtcca     3480

cttaagtaac aatacaatga tagctacaac aagagaaata gcaaaagcta caggaacaag     3540

tctacaaaca gtaataacaa cacttaaaat cttagaagaa ggaaatatta taaaaagaaa     3600

aactggagta ttaatgttaa accctgaact actaatgaga ggcgacgacc aaaaacaaaa     3660

atacctctta ctcgaatttg ggaactttga gcaagaggca aatgaaatag attgacctcc     3720

caataacacc acgtagttat tgggaggtca atctatgaaa tgcgattaag ggccggccaa     3780

gtgggcaagt tgaaaaattc acaaaaatgt ggtataatat ctttgttcat tagagcgata     3840

aacttgaatt tgagagggaa cttagatggt atttgaaaaa attgataaaa atagttggaa     3900

cagaaaagag tattttgacc actactttgc aagtgtacct tgtacctaca gcatgaccgt     3960

taaagtggat atcacacaaa taaaggaaaa gggaatgaaa ctatatcctg caatgcttta     4020

ttatattgca atgattgtaa accgccattc agagtttagg acggcaatca atcaagatgg     4080

tgaattgggg atatatgatg agatgatacc aagctataca atatttcaca atgatactga     4140

aacattttcc agcctttgga ctgagtgtaa gtctgacttt aaatcatttt tagcagatta     4200

tgaaagtgat acgcaacggt atggaaacaa tcatagaatg gaaggaaagc caaatgctcc     4260

ggaaaacatt tttaatgtat ctatgatacc gtggtcaacc ttcgatggct ttaatctgaa     4320

tttgcagaaa ggatatgatt atttgattcc tatttttact atggggaaat attataaaga     4380

agataacaaa attatacttc ctttggcaat tcaagttcat cacgcagtat gtgacggatt     4440

tcacatttgc cgttttgtaa acgaattgca ggaattgata aatagttaac ttcaggtttg     4500

tctgtaacta aaaacaagta tttaagcaaa aacatcgtag aaatacggtg ttttttgtta     4560

ccctaagttt aaacctctat attgacaaaa ataataatag tgggtataat taagttgtta     4620

tagaaaggag gatgtatagg tgaaaggaga gtttaaaatg aaagaagaat taaaacagat     4680

aaaggaaaat gcctttaacg aattaaaaaa taaaaagtta gatatagagg atataagagt     4740

taaatattta ggtaaaaagg gagaacttac aaaaatactc aggggcatga aggatctttc     4800

caaagaagaa agacctgcaa ttggtaagct tgcca                                4835


<210>  19
<211>  1131
<212>  DNA
<213>  Herpes simplex

<400>  19
atggcttcgt acccctgcca tcaacacgcg tctgcgttcg accaggctgc gcgttctcgc       60

ggccatagca accgacgtac ggcgttgcgc cctcgccggc agcaagaagc cacggaagtc      120

cgcccggagc agaaaatgcc cacgctactg cgggtttata tagacggtcc ccacgggatg      180

gggaaaacca ccaccacgca actgctggtg gccctgggtt cgcgcgacga tatcgtctac      240

gtacccgagc cgatgactta ctggcgggtg ctgggggctt ccgagacaat cgcgaacatc      300

tacaccacac aacaccgcct cgaccagggt gagatatcgg ccggggacgc ggcggtggta      360

atgacaagcg cccagataac aatgggcatg ccttatgccg tgaccgacgc cgttctggct      420

cctcatatcg ggggggaggc tgggagctca catgccccgc ccccggccct caccctcatc      480

ttcgaccgcc atcccatcgc cgccctcctg tgctacccgg ccgcgcggta ccttatgggc      540

agcatgaccc cccaggccgt gctggcgttc gtggccctca tcccgccgac cttgcccggc      600

acaaacatcg tgttgggggc ccttccggag gacagacaca tcgaccgcct ggccaaacgc      660

cagcgccccg gtgagcggct tgacctggct atgctggccg cgattcgccg cgtttacggg      720

ctacttgcca atacggtgcg gtatctgcag tgcggcgggt cgtggcggga ggattgggga      780

cagctttcgg gagcggcctt gacgccccag ggtgccgagc cccagagcaa cgcgggccca      840

cgaccccata tcggggaaac gttatttacc ctgtttcggg cccccgagtt gctggccccc      900

aacggcgacc tgtacaacgt gtttgcctgg gccttggacg tcttggccaa acgcctccgt      960

cccatgcacg tctttatcct ggattacgac caatcgcccg ccggctgccg ggacgccctg     1020

ctgcaactta cctccgggat ggtccagacc catgtcacca ccccaggctc cataccgacg     1080

atctgcgacc tggcgcgcac gtttgcccgg gagatggggg aggctcactg a              1131


<210>  20
<211>  327
<212>  PRT
<213>  Eschericia coli

<400>  20

Met Ser His Leu Ala Glu Leu Val Ala Ser Ala Lys Ala Ala Ile Ser 
1               5                   10                  15      


Gln Ala Ser Asp Val Ala Ala Leu Asp Asn Val Arg Val Glu Tyr Leu 
            20                  25                  30          


Gly Lys Lys Gly His Leu Thr Leu Gln Met Thr Thr Leu Arg Glu Leu 
        35                  40                  45              


Pro Pro Glu Glu Arg Pro Ala Ala Gly Ala Val Ile Asn Glu Ala Lys 
    50                  55                  60                  


Glu Gln Val Gln Gln Ala Leu Asn Ala Arg Lys Ala Glu Leu Glu Ser 
65                  70                  75                  80  


Ala Ala Leu Asn Ala Arg Leu Ala Ala Glu Thr Ile Asp Val Ser Leu 
                85                  90                  95      


Pro Gly Arg Arg Ile Glu Asn Gly Gly Leu His Pro Val Thr Arg Thr 
            100                 105                 110         


Ile Asp Arg Ile Glu Ser Phe Phe Gly Glu Leu Gly Phe Thr Val Ala 
        115                 120                 125             


Thr Gly Pro Glu Ile Glu Asp Asp Tyr His Asn Phe Asp Ala Leu Asn 
    130                 135                 140                 


Ile Pro Gly His His Pro Ala Arg Ala Asp His Asp Thr Phe Trp Phe 
145                 150                 155                 160 


Asp Thr Thr Arg Leu Leu Arg Thr Gln Thr Ser Gly Val Gln Ile Arg 
                165                 170                 175     


Thr Met Lys Ala Gln Gln Pro Pro Ile Arg Ile Ile Ala Pro Gly Arg 
            180                 185                 190         


Val Tyr Arg Asn Asp Tyr Asp Gln Thr His Thr Pro Met Phe His Gln 
        195                 200                 205             


Met Glu Gly Leu Ile Val Asp Thr Asn Ile Ser Phe Thr Asn Leu Lys 
    210                 215                 220                 


Gly Thr Leu His Asp Phe Leu Arg Asn Phe Phe Glu Glu Asp Leu Gln 
225                 230                 235                 240 


Ile Arg Phe Arg Pro Ser Tyr Phe Pro Phe Thr Glu Pro Ser Ala Glu 
                245                 250                 255     


Val Asp Val Met Gly Lys Asn Gly Lys Trp Leu Glu Val Leu Gly Cys 
            260                 265                 270         


Gly Met Val His Pro Asn Val Leu Arg Asn Val Gly Ile Asp Pro Glu 
        275                 280                 285             


Val Tyr Ser Gly Phe Ala Phe Gly Met Gly Met Glu Arg Leu Thr Met 
    290                 295                 300                 


Leu Arg Tyr Gly Val Thr Asp Leu Arg Ser Phe Phe Glu Asn Asp Leu 
305                 310                 315                 320 


Arg Phe Leu Lys Gln Phe Lys 
                325         


<210>  21
<211>  343
<212>  PRT
<213>  Clostridium autoethanogenum

<400>  21

Val Lys Gly Glu Phe Lys Met Lys Glu Glu Leu Lys Gln Ile Lys Glu 
1               5                   10                  15      


Asn Ala Phe Asn Glu Leu Lys Asn Lys Lys Leu Asp Ile Glu Asp Ile 
            20                  25                  30          


Arg Val Lys Tyr Leu Gly Lys Lys Gly Glu Leu Thr Lys Ile Leu Arg 
        35                  40                  45              


Gly Met Lys Asp Leu Ser Lys Glu Glu Arg Pro Ala Ile Gly Lys Leu 
    50                  55                  60                  


Ala Asn Glu Val Arg Ser Thr Leu Glu Asn Ala Ile Glu Glu Ala Ser 
65                  70                  75                  80  


Lys Lys Ile Lys Ser Ser Ala Ile Gln Ala Lys Leu Gln Asn Glu Thr 
                85                  90                  95      


Ile Asp Ile Thr Met Pro Gly Ile Lys Gln Thr Val Gly Lys Arg His 
            100                 105                 110         


Pro Leu Glu Gln Thr Leu Glu Glu Met Lys Gln Ile Phe Ile Ser Met 
        115                 120                 125             


Gly Phe Thr Ile Glu Glu Gly Pro Glu Val Glu Lys Asp Tyr Tyr Asn 
    130                 135                 140                 


Phe Glu Ala Leu Asn Ile Pro Lys Asn His Pro Ala Arg Gly Glu Gln 
145                 150                 155                 160 


Asp Thr Phe Tyr Ile Asn Asp Asn Val Val Leu Arg Thr Gln Thr Ser 
                165                 170                 175     


Pro Ile Gln Val Arg Thr Met Glu Lys Gln Lys Pro Pro Ile Lys Met 
            180                 185                 190         


Ile Ser Pro Gly Lys Val Tyr Arg Ser Asp Ser Val Asp Ala Thr His 
        195                 200                 205             


Ser Pro Ile Phe Tyr Gln Met Glu Gly Leu Val Val Asp Lys Gly Ile 
    210                 215                 220                 


Thr Phe Ala Asn Leu Lys Gly Thr Leu Glu Leu Phe Ala Lys Lys Leu 
225                 230                 235                 240 


Phe Gly Asn Asp Ile Arg Thr Lys Phe Arg Pro His His Phe Pro Phe 
                245                 250                 255     


Thr Glu Pro Ser Ala Glu Met Asp Ala Ser Cys Phe Val Cys His Gly 
            260                 265                 270         


Lys Gly Cys Arg Val Cys Lys Gly Glu Gly Trp Ile Glu Leu Leu Gly 
        275                 280                 285             


Cys Gly Met Val His Pro Gln Val Leu Arg Asn Cys Gly Ile Asp Pro 
    290                 295                 300                 


Glu Val Tyr Ser Gly Phe Ala Phe Gly Met Gly Val Asp Arg Met Val 
305                 310                 315                 320 


Met Leu Lys Tyr Gly Ile Asp Asp Ile Arg Asn Met Tyr Glu Ser Asp 
                325                 330                 335     


Met Arg Phe Leu Asn Gln Phe 
            340             


<210>  22
<211>  1131
<212>  DNA
<213>  Herpes simplex

<400>  22
atggcttcgt acccctgcca tcaacacgcg tctgcgttcg accaggctgc gcgttctcgc       60

ggccatagca accgacgtac ggcgttgcgc cctcgccggc agcaagaagc cacggaagtc      120

cgcccggagc agaaaatgcc cacgctactg cgggtttata tagacggtcc ccacgggatg      180

gggaaaacca ccaccacgca actgctggtg gccctgggtt cgcgcgacga tatcgtctac      240

gtacccgagc cgatgactta ctggcgggtg ctgggggctt ccgagacaat cgcgaacatc      300

tacaccacac aacaccgcct cgaccagggt gagatatcgg ccggggacgc ggcggtggta      360

atgacaagcg cccagataac aatgggcatg ccttatgccg tgaccgacgc cgttctggct      420

cctcatatcg ggggggaggc tgggagctca catgccccgc ccccggccct caccctcatc      480

ttcgaccgcc atcccatcgc cgccctcctg tgctacccgg ccgcgcggta ccttatgggc      540

agcatgaccc cccaggccgt gctggcgttc gtggccctca tcccgccgac cttgcccggc      600

acaaacatcg tgttgggggc ccttccggag gacagacaca tcgaccgcct ggccaaacgc      660

cagcgccccg gtgagcggct tgacctggct atgctggccg cgattcgccg cgtttacggg      720

ctacttgcca atacggtgcg gtatctgcag tgcggcgggt cgtggcggga ggattgggga      780

cagctttcgg gagcggcctt gacgccccag ggtgccgagc cccagagcaa cgcgggccca      840

cgaccccata tcggggaaac gttatttacc ctgtttcggg cccccgagtt gctggccccc      900

aacggcgacc tgtacaacgt gtttgcctgg gccttggacg tcttggccaa acgcctccgt      960

cccatgcacg tctttatcct ggattacgac caatcgcccg ccggctgccg ggacgccctg     1020

ctgcaactta cctccgggat ggtccagacc catgtcacca ccccaggctc cataccgacg     1080

atctgcgacc tggcgcgcac gtttgcccgg gagatggggg aggctcactg a              1131


<210>  23
<211>  621
<212>  DNA
<213>  Clostridium perfringens

<400>  23
atggtatttg aaaaaattga taaaaatagt tggaacagaa aagagtattt tgaccactac       60

tttgcaagtg taccttgtac ctacagcatg accgttaaag tggatatcac acaaataaag      120

gaaaagggaa tgaaactata tcctgcaatg ctttattata ttgcaatgat tgtaaaccgc      180

cattcagagt ttaggacggc aatcaatcaa gatggtgaat tggggatata tgatgagatg      240

ataccaagct atacaatatt tcacaatgat actgaaacat tttccagcct ttggactgag      300

tgtaagtctg actttaaatc atttttagca gattatgaaa gtgatacgca acggtatgga      360

aacaatcata gaatggaagg aaagccaaat gctccggaaa acatttttaa tgtatctatg      420

ataccgtggt caaccttcga tggctttaat ctgaatttgc agaaaggata tgattatttg      480

attcctattt ttactatggg gaaatattat aaagaagata acaaaattat acttcctttg      540

gcaattcaag ttcatcacgc agtatgtgac ggatttcaca tttgccgttt tgtaaacgaa      600

ttgcaggaat tgataaatag t                                                621


<210>  24
<211>  738
<212>  DNA
<213>  Peptoclostridium difficile

<400>  24
atgaacaaaa atataaaata ttctcaaaac tttttaacga gtgaaaaagt actcaaccaa       60

ataataaaac aattgaattt aaaagaaacc gataccgttt acgaaattgg aacaggtaaa      120

gggcatttaa cgacgaaact ggctaaaata agtaaacagg taacgtctat tgaattagac      180

agtcatctat tcaacttatc gtcagaaaaa ttaaaactga atactcgtgt cactttaatt      240

caccaagata ttctacagtt tcaattccct aacaaacaga ggtataaaat tgttgggagt      300

attccttacc atttaagcac acaaattatt aaaaaagtgg tttttgaaag ccatgcgtct      360

gacatctatc tgattgttga agaaggattc tacaagcgta ccttggatat tcaccgaaca      420

ctagggttgc tcttgcacac tcaagtctcg attcagcaat tgcttaagct gccagcggaa      480

tgctttcatc ctaaaccaaa agtaaacagt gtcttaataa aacttacccg ccataccaca      540

gatgttccag ataaatattg gaagctatat acgtactttg tttcaaaatg ggtcaatcga      600

gaatatcgtc aactgtttac taaaaatcag tttcatcaag caatgaaaca cgccaaagta      660

aacaatttaa gtaccgttac ttatgagcaa gtattgtcta tttttaatag ttatctatta      720

tttaacggga ggaaataa                                                    738


<210>  25
<211>  1275
<212>  DNA
<213>  Escherichia coli

<400>  25
atgtccacca acttatcagt gataaagaat ccgcgcgttc aatcggacca gcggaggctg       60

gtccggaggc cagacgtgaa acccaacaga cccctgatcg taattctgag cactgtcgcg      120

ctcgacgctg tcggcatcgg cctgattatg ccggtgctgc cgggcctcct gcgcgatctg      180

gttcactcga acgacgtcac cgcccactat ggcattctgc tggcgctgta tgcgttgatg      240

caatttgcct gcgcacctgt gctgggcgcg ctgtcggatc gtttcgggcg gcggccggtc      300

ttgctcgtct cgctggccgg cgctgctgtc gactacgcca tcatggcgac ggcgcctttc      360

ctttgggttc tctatatcgg gcggatcgtg gccggcatca ccggggcgac tggggcggta      420

gccggcgctt atattgccga tatcactgat ggcgatgagc gcgcgcggca cttcggcttc      480

atgagcgcct gtttcgggtt cgggatggtc gcgggacctg tgctcggtgg gctgatgggc      540

ggtttctccc cccacgctcc gttcttcgcc gcggcagcct tgaacggcct caatttcctg      600

acgggctgtt tccttttgcc ggagtcgcac aaaggcgaac gccggccgtt acgccgggag      660

gctctcaacc cgctcgcttc gttccggtgg gcccggggca tgaccgtcgt cgccgccctg      720

atggcggtct tcttcatcat gcaacttgtc ggacaggtgc cggccgcgct ttgggtcatt      780

ttcggcgagg atcgctttca ctgggacgcg accacgatcg gcatttcgct tgccgcattt      840

ggcattctgc attcactcgc ccaggcaatg atcaccggcc ctgtagccgc ccggctcggc      900

gaaaggcggg cactcatgct cggaatgatt gccgacggca caggctacat cctgcttgcc      960

ttcgcgacac ggggatggat ggcgttcccg atcatggtcc tgcttgcttc gggtggcatc     1020

ggaatgccgg cgctgcaagc aatgttgtcc aggcaggtgg atgaggaacg tcaggggcag     1080

ctgcaaggct cactggcggc gctcaccagc ctgacctcga tcgtcggacc cctcctcttc     1140

acggcgatct atgcggcttc tataacaacg tggaacgggt gggcatggat tgcaggcgct     1200

gccctctact tgctctgcct gccggcgctg cgtcgcgggc tttggagcgg cgcagggcaa     1260

cgagccgatc gctga                                                      1275


<210>  26

<400>  26
000

<210>  27

<400>  27
000

<210>  28
<211>  40
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  28
gcaagttgaa aaattcacga aagttacacg ttactaaagg                             40


<210>  29
<211>  40
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  29
cactatcaac acactcttaa gcttgccttg ctcgtcggtg                             40


<210>  30

<400>  30
000

<210>  31
<211>  40
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  31
gcttttgtaa atttgcataa aaataagaag cctgcatttg                             40


<210>  32
<211>  39
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  32
tttagtaacg tgtaactttc gtgaattttt caacttgcc                              39


<210>  33

<400>  33
000

<210>  34
<211>  40
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  34
caccgacgag caaggcaagc ttaagagtgt gttgatagtg                             40


<210>  35
<211>  40
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  35
gcttcttatt tttatgcaaa tttacaaaag cgactcatag                             40


<210>  36

<400>  36
000

<210>  37
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  37
cttgccttgc tcgtcggt                                                     18


<210>  38
<211>  27
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  38
aagtgatagt caaaaggcat aacagtg                                           27


<210>  39

<400>  39
000

<210>  40
<211>  39
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  40
gacgagcaag gcaagcaatt atagtgaaag atgtgaagg                              39


<210>  41
<211>  41
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  41
acctttttca taattatctc tcctttttta taatagtatg g                           41


<210>  42

<400>  42
000

<210>  43
<211>  33
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  43
agagataatt atgaaaaagg ttgcattagt tac                                    33


<210>  44
<211>  33
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  44
ccttacaatt taattaaata ccataccacc gtc                                    33


<210>  45

<400>  45
000

<210>  46
<211>  32
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  46
gtatttaatt aaattgtaag gatcctagtc ag                                     32


<210>  47
<211>  35
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  47
gtacttttta tgagctctta actatttatc aattc                                  35


<210>  48

<400>  48
000

<210>  49
<211>  40
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  49
agagctcata aaaagtactc atagaattga ttaaaaaatg                             40


<210>  50
<211>  44
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  50
atgccttttg actatcactt atacatctcc tttaaatcca tttg                        44


<210>  51
<211>  19
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  51
ctggaaaaga actcttagc                                                    19


<210>  52
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic primer

<400>  52
tgcggtggaa tacaatgg                                                     18


<210>  53

<400>  53
000

<210>  54

<400>  54
000

<210>  55

<400>  55
000

<210>  56

<400>  56
000

<210>  57

<400>  57
000

<210>  58

<400>  58
000

