                         SEQUENCE LISTING

<110>  Cornell University
 
<120>  METHOD FOR IDENTIFICATION AND ENUMERATION OF NUCLEIC ACID 
       SEQUENCE, EXPRESSION, COPY, OR DNA METHYLATION CHANGES USING 
       COMBINED NUCLEASE, LIGASE, POLYMERASE, AND SEQUENCING REACTIONS

<130>  29543.7452 (6632-03-PC)

<140>  PCT/US2015/034724
<141>  2015-06-08

<150>  US 62/009,047
<151>  2014-06-06

<150>  US 62/136,093
<151>  2015-03-20

<160>  154   

<170>  PatentIn version 3.5

<210>  1
<211>  33
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  1
acactctttc cctacacgac gctcttccga tct                                    33


<210>  2
<211>  33
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  2
gatcggaaga gcacacgtct gaactccagt cac                                    33


<210>  3
<211>  29
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  3
aatgatacgg cgaccaccga gatctacac                                         29


<210>  4
<211>  34
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  4
gtgactggag ttcagacgtg tgctcttccg atct                                   34


<210>  5
<211>  30
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  5
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa                                        30


<210>  6
<211>  14
<212>  DNA
<213>  Artificial

<220>
<223>  Short linker T Overhang

<400>  6
tgctcttccg atct                                                         14


<210>  7
<211>  12
<212>  DNA
<213>  Artificial

<220>
<223>  Bottom linker T overhang

<400>  7
gatcggaaga gc                                                           12


<210>  8
<211>  13
<212>  DNA
<213>  Artificial

<220>
<223>  Short linker blunt end

<400>  8
agatcggaag agc                                                          13


<210>  9
<211>  18
<212>  DNA
<213>  Artificial

<220>
<223>  Medium linker T overhang

<400>  9
tcgacgctct tccgatct                                                     18


<210>  10
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Medium linker T overhang

<400>  10
gatcggaaga gcacac                                                       16


<210>  11
<211>  29
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N at position 10 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<400>  11
aggcaagagn gcctngacga tacagctaa                                         29


<210>  12
<211>  59
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N at position 40 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<400>  12
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aggcaagagn gcctngacga tacagctaa        59


<210>  13
<211>  84
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  13
aggcaagagt gccttgacga tacagctaat tcagaatcat tttgtggacg agatcggaag       60

agcacacgtc tgaactccag tcac                                              84


<210>  14
<211>  77
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  N at position 64 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (73)..(73)
<223>  N at position 73 is Deoxyuridine

<400>  14
gagcacacgt ctgaactcca gtcaccgagt aatatctcgt angccgtctn ctgcttgaca       60

cacncgcaat ganacgg                                                      77


<210>  15
<211>  78
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (55)..(55)
<223>  N at position 55 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (67)..(67)
<223>  N at position 67 is Deoxyuridine

<400>  15
gagcgtcgtg tagggaaaga gtgtaggcta tagtgtagat cncggtggtc gccgnatcat       60

tgcgagngtg tcaagcag                                                     78


<210>  16
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  16
acactctttc cctacacgac gctcttccga tctttattat aaggcctgct gaaaatgact       60

gaatataaac ttgtggtagt tgg                                               83


<210>  17
<211>  37
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N at position 22 is Deoxyuridine

<400>  17
ccaactacca caagnttata tncagtcatt ttcagca                                37


<210>  18
<211>  67
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (52)..(52)
<223>  N at position 52 is Deoxyuridine

<400>  18
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ccaactacca caagnttata tncagtcatt       60

ttcagca                                                                 67


<210>  19
<211>  30
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  N at position 11 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<400>  19
ctcgatggag ngggtcccan cagtttgaac                                        30


<210>  20
<211>  60
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N at position 41 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<400>  20
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ctcgatggag ngggtcccan cagtttgaac       60


<210>  21
<211>  84
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  21
ctcgatggag tgggtcccat cagtttgaac agttgtctgg atccattttg agatcggaag       60

agcacacgtc tgaactccag tcac                                              84


<210>  22
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  22
acactctttc cctacacgac gctcttccga tcttttcttc atgaagacct cacagtaaaa       60

ataggtgatt ttggtctagc tac                                               83


<210>  23
<211>  41
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  N at position 16 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N at position 27 is Deoxyuridine

<400>  23
gtagctagac caaaancacc tattttnact gtgaggtctt c                           41


<210>  24
<211>  71
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (46)..(46)
<223>  N at position 46 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  N at position 57 is Deoxyuridine

<400>  24
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gtagctagac caaaancacc tattttnact       60

gtgaggtctt c                                                            71


<210>  25
<211>  25
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N at position 10 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  N at position 18 is Deoxyuridine

<400>  25
gtgcagctgn gggttgantc cacac                                             25


<210>  26
<211>  55
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N at position 40 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (48)..(48)
<223>  N at position 48 is Deoxyuridine

<400>  26
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gtgcagctgn gggttgantc cacac            55


<210>  27
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  27
gtgcagctgt gggttgattc cacacccccg cccggcaccc gcgtccgcga gatcggaaga       60

gcacacgtct gaactccagt cac                                               83


<210>  28
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  28
acactctttc cctacacgac gctcttccga tcttcctaca gtactcccct gccctcaaca       60

agatgttttg ccaactggcc aag                                               83


<210>  29
<211>  29
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  N at position 11 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  N at position 21 is Deoxyuridine

<400>  29
cttggccagt nggcaaaaca ncttgttga                                         29


<210>  30
<211>  59
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N at position 41 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (51)..(51)
<223>  N at position 51 is Deoxyuridine

<400>  30
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa cttggccagt nggcaaaaca ncttgttga        59


<210>  31
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N at position 10 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<400>  31
gagcgctgcn caganagcga tggtga                                            26


<210>  32
<211>  56
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N at position 40 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<400>  32
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gagcgctgcn caganagcga tggtga           56


<210>  33
<211>  84
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  33
gagcgctgct cagatagcga tggtgagcag ctggagctgg agagacgaca agatcggaag       60

agcacacgtc tgaactccag tcac                                              84


<210>  34
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  34
acactctttc cctacacgac gctcttccga tcttccgcgc catggccatc tacaagcagt       60

cacagcacat gacggaggtt gtg                                               83


<210>  35
<211>  27
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  N at position 12 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<400>  35
cacaacctcc gncatgtgcn gtgactg                                           27


<210>  36
<211>  57
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<400>  36
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa cacaacctcc gncatgtgcn gtgactg          57


<210>  37
<211>  31
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  N at position 11 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N at position 22 is Deoxyuridine

<400>  37
gaaacacttt ncgacatagt gnggtggtgc c                                      31


<210>  38
<211>  61
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N at position 41 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (52)..(52)
<223>  N at position 52 is Deoxyuridine

<400>  38
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gaaacacttt ncgacatagt gnggtggtgc       60

c                                                                       61


<210>  39
<211>  84
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  39
gaaacacttt tcgacatagt gtggtggtgc cctatgagcc gcctgaggtc agatcggaag       60

agcacacgtc tgaactccag tcac                                              84


<210>  40
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  40
acactctttc cctacacgac gctcttccga tctggcccct cctcagcatc ttatccgagt       60

ggaaggaaat ttgcgtgtgg agt                                               83


<210>  41
<211>  27
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<400>  41
actccacacg caaanttccn tccactc                                           27


<210>  42
<211>  57
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<400>  42
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa actccacacg caaanttccn tccactc          57


<210>  43
<211>  28
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  N at position 12 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  N at position 18 is Deoxyuridine

<400>  43
cctcaccatc ancacacngg aagactcc                                          28


<210>  44
<211>  58
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (48)..(48)
<223>  N at position 48 is Deoxyuridine

<400>  44
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa cctcaccatc ancacacngg aagactcc         58


<210>  45
<211>  84
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  45
cctcaccatc atcacactgg aagactccag gtcaggagcc acttgccacc agatcggaag       60

agcacacgtc tgaactccag tcac                                              84


<210>  46
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  46
acactctttc cctacacgac gctcttccga tctgctctga ctgtaccacc atccactaca       60

actacatgtg taacagttcc tgc                                               83


<210>  47
<211>  34
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  N at position 12 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<400>  47
gcaggaactg tnacacatgn agttgtagtg gatg                                   34


<210>  48
<211>  64
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<400>  48
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gcaggaactg tnacacatgn agttgtagtg       60

gatg                                                                    64


<210>  49
<211>  24
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<400>  49
gggagagacc ggcgnacaga ggaa                                              24


<210>  50
<211>  54
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<400>  50
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gggagagacc ggcgnacaga ggaa             54


<210>  51
<211>  84
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<400>  51
gggagagacc ggcgnacaga ggaagagaat ctccgcaaga aaggagagcc agatcggaag       60

agcacacgtc tgaactccag tcac                                              84


<210>  52
<211>  83
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  52
acactctttc cctacacgac gctcttccga tctctctttt cctatcctga gtagtggtaa       60

tctactggga cggaacagct ttg                                               83


<210>  53
<211>  28
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  N at position 7 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  N at position 14 is Deoxyuridine

<400>  53
caaagcngtt ccgncccagt agattacc                                          28


<210>  54
<211>  58
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (37)..(37)
<223>  N at position 37 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  N at position 44 is Deoxyuridine

<400>  54
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa caaagcngtt ccgncccagt agattacc         58


<210>  55
<211>  25
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  N at position 12 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  N at position 17 is Deoxyuridine

<400>  55
gtaggcaaga gngcttngac gatac                                             25


<210>  56
<211>  55
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (47)..(47)
<223>  N at position 47 is Deoxyuridine

<400>  56
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gtaggcaaga gngcttngac gatac            55


<210>  57
<211>  119
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (81)..(85)
<223>  n is a, c, g, or t

<400>  57
gtaggcaaga gtgctttgac gatacagctg attcagaatc atttcgtgga cgaatatgac       60

ccaacaatag aggtagatct nnnnnagatc ggaagagcac acgtctgaac tccagtcac       119


<210>  58
<211>  77
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  N at position 64 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (73)..(73)
<223>  N at position 73 is Deoxyuridine

<400>  58
gagcacacgt ctgaactcca gtcacttctg aatatctcgt angccgtctn ctgcttgaca       60

cacncgcaat ganacgg                                                      77


<210>  59
<211>  78
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (55)..(55)
<223>  N at position 55 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (67)..(67)
<223>  N at position 67 is Deoxyuridine

<400>  59
gagcgtcgtg tagggaaaga gtgtgcctct atgtgtagat cncggtggtc gccgnatcat       60

tgcgagngtg tcaagcag                                                     78


<210>  60
<211>  118
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(38)
<223>  n is a, c, g, or t

<400>  60
acactctttc cctacacgac gctcttccga tctnnnnnct aatatggtca cattttcatt       60

gtttttatta taaggtctgc tgaaaatgac cgaatataaa cttgtagtag ttggagct        118


<210>  61
<211>  31
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N at position 10 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<400>  61
agctccaacn actacaagtn tatattcggt c                                      31


<210>  62
<211>  61
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N at position 40 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<400>  62
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa agctccaacn actacaagtn tatattcggt       60

c                                                                       61


<210>  63
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  N at position 4 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N at position 10 is Deoxyuridine

<400>  63
aaanctcgan ggagcgggtc c                                                 21


<210>  64
<211>  51
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(34)
<223>  N at position 34 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N at position 40 is Deoxyuridine

<400>  64
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaanctcgan ggagcgggtc c                51


<210>  65
<211>  119
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (81)..(85)
<223>  n is a, c, g, or t

<400>  65
aaatctcgat ggagcgggtc ccatcagttc gaacagttgt ctgggtccat tttgtggata       60

gtaagaattg aggctgtttt nnnnnagatc ggaagagcac acgtctgaac tccagtcac       119


<210>  66
<211>  118
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(38)
<223>  n is a, c, g, or t

<400>  66
acactctttc cctacacgac gctcttccga tctnnnnntt tccttcactt actacacctc       60

ggatatattt cttcacgaag acctcacagt gaaaataggt gatttcggtc tagctaca        118


<210>  67
<211>  30
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  N at position 7 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  N at position 17 is Deoxyuridine

<400>  67
tgtagcnaga ccgaaancac ctattttcac                                        30


<210>  68
<211>  60
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (37)..(37)
<223>  N at position 37 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (47)..(47)
<223>  N at position 47 is Deoxyuridine

<400>  68
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa tgtagcnaga ccgaaancac ctattttcac       60


<210>  69
<211>  18
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  N at position 7 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<400>  69
aggcgcngcc cccancat                                                     18


<210>  70
<211>  48
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (37)..(37)
<223>  N at position 37 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<400>  70
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aggcgcngcc cccancat                    48


<210>  71
<211>  119
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (81)..(85)
<223>  n is a, c, g, or t

<400>  71
aggcgctgcc cccatcatga gcgctgctcg gatagcgatg gtgaacagct ggagctggaa       60

agacgacagg gctggctgcc nnnnnagatc ggaagagcac acgtctgaac tccagtcac       119


<210>  72
<211>  118
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(38)
<223>  n is a, c, g, or t

<400>  72
acactctttc cctacacgac gctcttccga tctnnnnntg tgggtcgatt ccacaccccc       60

acccggcacc cgcgttcgcg ccatggccat ttacaagcag tcacaacaca tgacggag        118


<210>  73
<211>  29
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  N at position 11 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<400>  73
ctccgtcatg ngttgtgacn gcttgtaaa                                         29


<210>  74
<211>  59
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N at position 41 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<400>  74
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ctccgtcatg ngttgtgacn gcttgtaaa        59


<210>  75
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  N at position 8 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  N at position 18 is Deoxyuridine

<400>  75
aacacttntc gacacagngt ggtggt                                            26


<210>  76
<211>  56
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (38)..(38)
<223>  N at position 38 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (48)..(48)
<223>  N at position 48 is Deoxyuridine

<400>  76
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aacacttntc gacacagngt ggtggt           56


<210>  77
<211>  119
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (81)..(85)
<223>  n is a, c, g, or t

<400>  77
aacacttttc gacacagtgt ggtggtgcct tatgagccgc ctgaagtctg gtttgcaacc       60

ggagtctctg ggaggaaggg nnnnnagatc ggaagagcac acgtctgaac tccagtcac       119


<210>  78
<211>  118
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(38)
<223>  n is a, c, g, or t

<400>  78
acactctttc cctacacgac gctcttccga tctnnnnnct cactgactgc tcttaggtct       60

agcccctcct cagcacctta tccgagtgga gggaaatttg cgtgtagagt atttggat        118


<210>  79
<211>  31
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  N at position 11 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  N at position 23 is Deoxyuridine

<400>  79
atccaaatac nctacacgca aanttccctc c                                      31


<210>  80
<211>  61
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N at position 41 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (53)..(53)
<223>  N at position 53 is Deoxyuridine

<400>  80
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa atccaaatac nctacacgca aanttccctc       60

c                                                                       61


<210>  81
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  N at position 8 is Deoxyuridine

<400>  81
ggcggcanga accgaagacc c                                                 21


<210>  82
<211>  51
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (38)..(38)
<223>  N at position 38 is Deoxyuridine

<400>  82
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ggcggcanga accgaagacc c                51


<210>  83
<211>  119
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (81)..(85)
<223>  n is a, c, g, or t

<400>  83
ggcggcatga accgaaggcc catcctcact atcatcacac tggaggactc caggtcagga       60

accacttgcc accctgtaca nnnnnagatc ggaagagcac acgtctgaac tccagtcac       119


<210>  84
<211>  118
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(38)
<223>  n is a, c, g, or t

<400>  84
acactctttc cctacacgac gctcttccga tctnnnnntg gcctcacctt gggcctgtgt       60

catctcctag gttggttctg actgtaccac tatccactac aactatatgt gtaacagt        118


<210>  85
<211>  35
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  N at position 12 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  N at position 23 is Deoxyuridine

<400>  85
actgttacac anatagttgt agnggatagt ggtac                                  35


<210>  86
<211>  65
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (53)..(53)
<223>  N at position 53 is Deoxyuridine

<400>  86
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa actgttacac anatagttgt agnggatagt       60

ggtac                                                                   65


<210>  87
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  N at position 9 is Deoxyuridine

<400>  87
agagaccgnc gcacggagga a                                                 21


<210>  88
<211>  51
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (39)..(39)
<223>  N at position 39 is Deoxyuridine

<400>  88
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa agagaccgnc gcacggagga a                51


<210>  89
<211>  119
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  N at position 9 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (81)..(85)
<223>  n is a, c, g, or t

<400>  89
agagaccgnc gcacggagga agagaatctt cgcaagaaag gagaacctca ccacgagcta       60

cccccaggga gcaccaagcg nnnnnagatc ggaagagcac acgtctgaac tccagtcac       119


<210>  90
<211>  118
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(38)
<223>  n is a, c, g, or t

<400>  90
acactctttc cctacacgac gctcttccga tctnnnnntt actgcttctt gcttctcttc       60

tcctatcctg agtaatggta atctactgga acggaacagc tttgaagtgc gtgtttgt        118


<210>  91
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  N at position 13 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  N at position 21 is Deoxyuridine

<400>  91
acaaacacgc acntcaaagc ngttcc                                            26


<210>  92
<211>  56
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (43)..(43)
<223>  N at position 43 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (51)..(51)
<223>  N at position 51 is Deoxyuridine

<400>  92
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa acaaacacgc acntcaaagc ngttcc           56


<210>  93
<211>  34
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (30)..(30)
<223>  N at position 30 is ribouridine

<400>  93
aaggcctgct gaaaatgctg aatataaacn tgta                                   34


<210>  94
<211>  36
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (32)..(32)
<223>  N at position 32 is riboguanosine

<400>  94
cgtccacaaa atgattcgaa ttagctgtat cntcag                                 36


<210>  95
<211>  39
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (35)..(35)
<223>  N at position 35 is riboadenosine

<400>  95
tcagatatat ttcttcatga gacctcacag taaanataa                              39


<210>  96
<211>  33
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  N at position 29 is ribouridine

<400>  96
acaaaatgga tccagcaact gttcaaacng ata                                    33


<210>  97
<211>  30
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  N at position 26 is riboadenosine

<400>  97
cgccatggcc atcacaagca gtcacngcat                                        30


<210>  98
<211>  29
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (25)..(25)
<223>  N at position 25 is riboguanosine

<400>  98
gctgctcacc atcctatctg agcancgca                                         29


<210>  99
<211>  32
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (28)..(28)
<223>  N at position 28 is riboadenosine

<400>  99
cttcctacag tactccctgc cctcaacnag ac                                     32


<210>  100
<211>  29
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (25)..(25)
<223>  N at position 25 is riboguanosine

<400>  100
ggcggaggtg tgaatcaacc cacanctgt                                         29


<210>  101
<211>  33
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  N at position 29 is ribouridine

<400>  101
cctcagcatc ttatcgagtg gaaggaaant tgt                                    33


<210>  102
<211>  24
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is ribocytosine

<400>  102
cggctcatag ggaccaccan actg                                              24


<210>  103
<211>  35
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (31)..(31)
<223>  N at position 31 is riboadenosine

<400>  103
ctctgactgt accaccacca ctacaactac ntgta                                  35


<210>  104
<211>  31
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N at position 27 is ribouridine

<400>  104
ctgacctgga gtcttcagtg tgatganggt a                                      31


<210>  105
<211>  33
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  N at position 29 is riboadenosine

<400>  105
tgagtagtgg taatctactg gacggaacng ctc                                    33


<210>  106
<211>  32
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (28)..(28)
<223>  N at position 28 is ribocytosine

<400>  106
gctccccttt cttgggagat tctcttcntc ta                                     32


<210>  107
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  KRAS top strand capture oligo

<400>  107
tttttttttt gctggtggcg taggcaagag tgccttgacg atacagctaa ttcagaatca       60

ttttgtggac                                                              70


<210>  108
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  KRAS bottom strand capture oligo

<400>  108
tttttttttt acgccaccag ctccaactac cacaagttta tattcagtca ttttcagcag       60

gccttataat                                                              70


<210>  109
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  BRAF top strand capture oligo

<400>  109
tttttttttt gctacagtga aatctcgatg gagtgggtcc catcagtttg aacagttgtc       60

tggatccatt                                                              70


<210>  110
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  BRAF bottom strand capture oligo

<400>  110
tttttttttt gatttcactg tagctagacc aaaatcacct atttttactg tgaggtcttc       60

atgaagaaat                                                              70


<210>  111
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 5.1 top strand capture oligo

<400>  111
tttttttttt aagacctgcc ctgtgcagct gtgggttgat tccacacccc cgcccggcac       60

ccgcgtccgc                                                              70


<210>  112
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 5.1 bottom strand capture oligo

<400>  112
tttttttttt cacagggcag gtcttggcca gttggcaaaa catcttgttg agggcaggag       60

agtactgtag                                                              70


<210>  113
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 5.2 top strand capture oligo

<400>  113
tttttttttt aggcgctgcc cccaccatga gcgctgctca gatagcgatg gtgagcagct       60

ggagctggag                                                              70


<210>  114
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 5.2 bottom strand capture oligo

<400>  114
tttttttttt gggcagcgcc tcacaacctc cgtcatgtgc tgtgactgct tgtagatggc       60

catggcgcgg                                                              70


<210>  115
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 6 top strand capture oligo

<400>  115
tttttttttt ttggatgaca gaaacacttt tcgacatagt gtggtggtgc cctatgagcc       60

gcctgaggtc                                                              70


<210>  116
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 6 bottom strand capture oligo

<400>  116
tttttttttt gtcatccaaa tactccacac gcaaatttcc ttccactcgg ataagatgct       60

gaggaggagc                                                              70


<210>  117
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 7 top strand capture oligo

<400>  117
tttttttttt ggcggcatga accggaggcc catcctcacc atcatcacac tggaagactc       60

caggtcagga                                                              70


<210>  118
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 7 bottom strand capture oligo

<400>  118
tttttttttt catgccgccc atgcaggaac tgttacacat gtagttgtag tggatggtgg       60

tacagtcaga                                                              70


<210>  119
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 8 top strand capture oligo

<400>  119
tttttttttt tgtcctggga gagaccgacg cacagaggaa gagaatctcc gcaagaaagg       60

agagcctcac                                                              70


<210>  120
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  TP53 Exon 8 bottom strand capture oligo

<400>  120
tttttttttt cccaggacat gcacaaacac gcacctcaaa gctgttccgt cccagtagat       60

taccactact                                                              70


<210>  121
<211>  42
<212>  DNA
<213>  Artificial

<220>
<223>  Blunt end linker


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  N at position 6 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  N at position 12 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  N at position 21 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (35)..(39)
<223>  n is a, c, g, or t

<400>  121
gtgacnggag tncagacgtg ngctcttccg atctnnnnng cc                          42


<210>  122
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  Blunt end linker


<220>
<221>  misc_feature
<222>  (4)..(8)
<223>  N at positions 4-8 is 5' nitroindole

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  N at position 12 is Deoxyuridine

<400>  122
ggcnnnnnag ancggaagag c                                                 21


<210>  123
<211>  27
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  N at position 4 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<400>  123
agancggaag agcgncgtgt agggaaa                                           27


<210>  124
<211>  57
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (34)..(34)
<223>  N at position 34 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<400>  124
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa agancggaag agcgncgtgt agggaaa          57


<210>  125
<211>  92
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  N at position 4 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (31)..(31)
<223>  N at position 31 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (49)..(49)
<223>  N at position 49 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  N at position 64 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (80)..(80)
<223>  N at position 80 is Deoxyuridine

<400>  125
agancggaag agcgncgtgt agggaaagag ngtaggatag ggtgtaganc tcggtggtcg       60

ccgnatcatt gcgagtgtgn caagcagaag ac                                     92


<210>  126
<211>  82
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  N a position 19 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (31)..(31)
<223>  N a position 31 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (49)..(49)
<223>  N a position 49 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (65)..(65)
<223>  N a position 65 is Deoxyuridine

<400>  126
aaaaaggaag agcacacgnc tgaactccag ncaccgagta atatctcgna tgccgtcttc       60

tgctngacac actcgcaatg at                                                82


<210>  127
<211>  27
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  N at position 19 is Deoxyuridine

<400>  127
aaaaaggaag agcacacgnc tgaactc                                           27


<210>  128
<211>  52
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  N at position 44 is Deoxyuridine

<400>  128
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ggaagagcac acgnctgaac tc               52


<210>  129
<211>  84
<212>  DNA
<213>  Artificial

<220>
<223>  Long D702 blunt end Linker


<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N at position 10 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N at position 27 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (35)..(35)
<223>  N at position 35 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (48)..(48)
<223>  N at position 48 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (54)..(54)
<223>  N at position 54 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (63)..(63)
<223>  N at position 63 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (77)..(81)
<223>  n is a, c, g, or t

<400>  129
gcgagtgtgn caagcagaag acggcanacg agatnccgga gagtgacngg agtncagacg       60

tgngctcttc cgatctnnnn ngcc                                              84


<210>  130
<211>  100
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  N at position 18 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (33)..(33)
<223>  N at position 33 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (51)..(51)
<223>  N at position 51 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  N at position 64 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (80)..(80)
<223>  N at position 80 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (96)..(96)
<223>  N at position 96 is Deoxyuridine

<400>  130
agatcggaag agcgtcgngt agggaaagag tgnaggatag ggtgtagatc ncggtggtcg       60

ccgnatcatt gcgagtgtgn caagcagaag acggcntttt                            100


<210>  131
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  D503 thiophosphate Linker

<400>  131
aatgatacgg cgaccaccga gatctacacc ctatcctaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  132
<211>  65
<212>  DNA
<213>  Artificial

<220>
<223>  D707 Linker

<400>  132
gatcggaaga gcacacgtct gaactccagt cacagcttca gatctcgtat gccgtcttct       60

gcttg                                                                   65


<210>  133
<211>  67
<212>  DNA
<213>  Artificial

<220>
<223>  Universal reverse linker bridge


<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  N at position 9 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N at position 22 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (38)..(38)
<223>  N at position 38 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (55)..(55)
<223>  N at position 55 is Deoxyuridine

<400>  133
tgtagatcnc ggtggtcgcc gnatcattgc gagtgtgnca agcagaagac ggcanacgag       60

atttttt                                                                 67


<210>  134
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  D504 thiophosphate Linker

<400>  134
aatgatacgg cgaccaccga gatctacacg gctctgaaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  135
<211>  11
<212>  DNA
<213>  Artificial

<220>
<223>  Small 5'-phos Linker

<400>  135
cctccgaccg t                                                            11


<210>  136
<211>  82
<212>  DNA
<213>  Artificial

<220>
<223>  D708 modified Linker


<220>
<221>  misc_feature
<222>  (11)..(16)
<223>  n is a, c, g, or t

<400>  136
cggtcggagg nnnnnnagat cggaagagca cacgtctgaa ctccagtcac gcgcattaat       60

ctcgtatgcc gtcttctgct tg                                                82


<210>  137
<211>  70
<212>  DNA
<213>  Artificial

<220>
<223>  D505 thiophosphate Linker

<400>  137
aatgatacgg cgaccaccga gatctacaca ggcgaagaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  138
<211>  9
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  138
ctccgaccg                                                                9


<210>  139
<211>  79
<212>  DNA
<213>  Artificial

<220>
<223>  D506 - 2rG-LNA Linker


<220>
<221>  misc_feature
<222>  (71)..(76)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (77)..(78)
<223>  N at positions 77-78 is riboguanosine

<220>
<221>  misc_feature
<222>  (79)..(79)
<223>  N at positions 79 is locked nucleic acid guanosine

<400>  139
aatgatacgg cgaccaccga gatctacact aatcttaaca ctctttccct acacgacgct       60

cttccgatct nnnnnnnnn                                                    79


<210>  140
<211>  65
<212>  DNA
<213>  Artificial

<220>
<223>  D709 Linker

<400>  140
gatcggaaga gcacacgtct gaactccagt caccatagcc gatctcgtat gccgtcttct       60

gcttg                                                                   65


<210>  141
<211>  107
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N at position 40 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (66)..(66)
<223>  N at position 66 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (80)..(80)
<223>  N at position 80 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (96)..(96)
<223>  N at position 96 is Deoxyuridine

<400>  141
cgatacagct aattcagaan cattttgtgg acgaattttn aggtcgccgn atcattgcga       60

gtgtgncaag cagaagacgn tttttgctgg tggcgnaggc aagagtg                    107


<210>  142
<211>  115
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N at position 27 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (49)..(49)
<223>  N at position 49 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (59)..(59)
<223>  N at position 59 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (75)..(75)
<223>  N at position 75 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (89)..(89)
<223>  N at position 89 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (106)..(106)
<223>  N at position 106 is Deoxyuridine

<400>  142
ttatattcag tcattttcag caggccntat aataaaaata atgattttna ggtcgccgna       60

tcattgcgag tgtgncaagc agaagacgnt ttttacgcca ccagcnccaa ctacc           115


<210>  143
<211>  110
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  N at position 14 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N at position 20 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (36)..(36)
<223>  N at position 36 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (46)..(46)
<223>  N at position 46 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  N at position 62 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (76)..(76)
<223>  N at position 76 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (94)..(94)
<223>  N at position 94 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (100)..(100)
<223>  N at position 100 is Deoxyuridine

<400>  143
gtttgaacag ttgnctggan ccattttgtg gttttnaggt cgccgnatca ttgcgagtgt       60

gncaagcaga agacgntttt tgctacagtg aaanctcgan ggagtgggtc                 110


<210>  144
<211>  130
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  N at position 16 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  N at position 29 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (47)..(47)
<223>  N at position 47 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  N at position 57 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (73)..(73)
<223>  N at position 73 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (87)..(87)
<223>  N at position 87 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (107)..(107)
<223>  N at position 107 is Deoxyuridine

<400>  144
gtcttcatga agaaanatat ctgaggtgna gtaagtaaag gattttnagg tcgccgnatc       60

attgcgagtg tgncaagcag aagacgnttt ttgatttcac tgtagcnaga ccaaaatcac      120

ctatttttac                                                             130


<210>  145
<211>  92
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  N at position 13 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  N at position 24 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (34)..(34)
<223>  N at position 34 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N at position 50 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  N at position 64 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (76)..(76)
<223>  N at position 76 is Deoxyuridine

<400>  145
tgattccaca ccnccgccct tttnaggtcg ccgnatcatt gcgagtgtgn caagcagaag       60

acgnttttta agaccngccc tgtgcagctg tg                                     92


<210>  146
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N at position 15 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (35)..(35)
<223>  N at position 35 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (61)..(61)
<223>  N at position 61 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (75)..(75)
<223>  N at position 75 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (88)..(88)
<223>  N at position 88 is Deoxyuridine

<400>  146
catcttgttg agggnaggag agtactgtag ttttnaggtc gccgnatcat tgcgagtgtg       60

ncaagcagaa gacgnttttt cacagggnag gtcttggcca gttg                       104


<210>  147
<211>  95
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  N at position 17 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (31)..(31)
<223>  N at position 31 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N at position 41 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  N at position 57 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (71)..(71)
<223>  N at position 71 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (83)..(83)
<223>  N at position 83 is Deoxyuridine

<400>  147
gctcagatag cgatggngag cagctgtttt naggtcgccg natcattgcg agtgtgncaa       60

gcagaagacg ntttttaggc gcngccccca ccatg                                  95


<210>  148
<211>  96
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  N at position 21 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (31)..(31)
<223>  N at position 31 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N at position 41 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  N at position 57 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (71)..(71)
<223>  N at position 71 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (80)..(80)
<223>  N at position 80 is Deoxyuridine

<400>  148
gtgctgtgac tgcttgtaga nggccatttt naggtcgccg natcattgcg agtgtgncaa       60

gcagaagacg ntttttgggn agcgcctcac aacctc                                 96


<210>  149
<211>  105
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  `N at position 15 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  `N at position 27 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (37)..(37)
<223>  `N at position 37 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (53)..(53)
<223>  `N at position 53 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (67)..(67)
<223>  `N at position 67 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (78)..(78)
<223>  `N at position 78 is Deoxyuridine

<400>  149
ccctatgagc cgccngaggt ctttttnagg tcgccgnatc attgcgagtg tgncaagcag       60

aagacgnttt ttttgganga cagaaacact tttcgacata gtgtg                      105


<210>  150
<211>  107
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N at position 22 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (32)..(32)
<223>  N at position 32 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (58)..(58)
<223>  N at position 58 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (72)..(72)
<223>  N at position 72 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (88)..(88)
<223>  N at position 88 is Deoxyuridine

<400>  150
tcggataaga tgctgaggag gngccagttt tnaggtcgcc gnatcattgc gagtgtgnca       60

agcagaagac gntttttgtc atccaaanac tccacacgca aatttcc                    107


<210>  151
<211>  98
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N at position 22 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (32)..(32)
<223>  N at position 32 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N at position 42 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (58)..(58)
<223>  N at position 58 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (72)..(72)
<223>  N at position 72 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (85)..(85)
<223>  N at position 85 is Deoxyuridine

<400>  151
accatcatca cactggaaga cnccaggttt tnaggtcgcc gnatcattgc gagtgtgnca       60

agcagaagac gntttttggc ggcangaacc ggagaccc                               98


<210>  152
<211>  103
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  N at position 23 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (36)..(36)
<223>  N at position 36 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (46)..(46)
<223>  N at position 46 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  N at position 62 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (76)..(76)
<223>  N at position 76 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (86)..(86)
<223>  N at position 86 is Deoxyuridine

<400>  152
atgtagttgt agtggatggt ggnacagtca gttttnaggt cgccgnatca ttgcgagtgt       60

gncaagcaga agacgntttt tcatgncgcc catgcaggaa ctg                        103


<210>  153
<211>  99
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (25)..(25)
<223>  N at position 25 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (34)..(34)
<223>  N at position 34 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  N at position 44 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (60)..(60)
<223>  N at position 60 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (74)..(74)
<223>  N at position 74 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (85)..(85)
<223>  N at position 85 is Deoxyuridine

<400>  153
ggaagagaat ctccgcaaga aaggngagct tttnaggtcg ccgnatcatt gcgagtgtgn       60

caagcagaag acgntttttt gtccngggag agaccggcg                              99


<210>  154
<211>  107
<212>  DNA
<213>  Artificial

<220>
<223>  Primer


<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  N at position 17 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (35)..(35)
<223>  N at position 35 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N at position 45 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (61)..(61)
<223>  N at position 61 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (75)..(75)
<223>  N at position 75 is Deoxyuridine

<220>
<221>  misc_feature
<222>  (90)..(90)
<223>  N at position 90 is Deoxyuridine

<400>  154
gttccgtccc agtagantac cactactcag ttttnaggtc gccgnatcat tgcgagtgtg       60

ncaagcagaa gacgnttttt cccaggacan gcacaaacac gcacctc                    107


