               SEQUENCE LISTING

<110> Deutsches Krebsforschungszentrum

<120> TTV miRNA sequences as an early marker for the future development of cancer and as a target for cancer treatment and prevention

<130> K 3548PCT


<150> PCT/EP2014/062251
<151> 2014-06-12

<160> 84

<170> BiSSAP 1.0

<210> 1
<211> 39
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..39
<223> /mol_type="RNA"
      /note="consensus sequence"
      /organism="Torque teno virus"

<400> 1
gccucggacc cccccnnnnu cgannnncca gaaucgcuc                            39


<210> 2
<211> 39
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..39
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 2
cgggggcugg gggggcuccg gcguccaggn cuuagcgcg                            39


<210> 3
<211> 40
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..40
<223> /mol_type="RNA"
      /organism="Torque teno virus"

<400> 3
gcugugacgu cagucaaccg uggnggagga cggcguguaa                           40


<210> 4
<211> 40
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..40
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 4
cggcacugca gucncagugc acuaccnccu acugaaggcc                           40


<210> 5
<211> 33
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..33
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 5
ccgccgncua cgucacannc uuccucuuuu uuu                                  33


<210> 6
<211> 33
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..33
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 6
ggcgguagaa ncacugaagg aaggcgaaaa aca                                  33


<210> 7
<211> 42
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..42
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 7
ggccgugacg ucagngucac gugaugggga ugacuuccgg gu                        42


<210> 8
<211> 42
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..42
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 8
ccgacacugc aguugcagug cannnccccu ccugccngca ca                        42


<210> 9
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 9
ggccgccauu uuaaguaann ggcggaagca acuccacuuu cucacaaaau ggcggcggag     60

cacuuccggc uugcccaaaa uggccgcc                                        88


<210> 10
<211> 84
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..84
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 10
ccgccauuuu aaguaanngg cggaagcagc uccacuuucu cacaaaaugg cggcggagca     60

cuuccggcuu gcccaaaaug gcgg                                            84


<210> 11
<211> 84
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..84
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 11
ccgccauuuu aaguaanngg cggaagcagc uccacccucu cacauaaugg cggcggagca     60

cucccggcuu gcccaaaaug gcgg                                            84


<210> 12
<211> 86
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..86
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 12
gccgccauuu uaaguaanng gcggaagcag cucggcauan nuacaaaaug ucggcggagc     60

acuuccggcu uacccaaaau gaaggc                                          86


<210> 13
<211> 71
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..71
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 13
gccucggacc cccccucgac cagaaucgcu cgcgcgauuc ggaccugnnc ggccucgggg     60

gggucggggg c                                                          71


<210> 14
<211> 69
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..69
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 14
ccucggaccc ccccccgacc cgaaucgcuc gcgcgauucg gaccugnncg gccucggggg     60

gggucgggg                                                             69


<210> 15
<211> 61
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..61
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 15
ccucggaccc ccgcucgugc ugacgcgcuu gcgcgcguca gaccacuucg ggcucgcggg     60

g                                                                     61


<210> 16
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 16
gcugugacgu caacgucacg uggggaggac ggcguguaac ccggaaguca uccccanuca     60

cgugaccuga cgucacggc                                                  79


<210> 17
<211> 71
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..71
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 17
acgucacaag ucacgugggg aggguuggcg uauagcccgg aagucaaucc uncccacgug     60

gccugucacg u                                                          71


<210> 18
<211> 83
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..83
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 18
gcagcuacgu cacaagucac cugacugggg aggaguuaca ucccggaagu ucuccucggu     60

cacgugacug uacacgugac ugc                                             83


<210> 19
<211> 71
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..71
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 19
acgucacaag ucaccugacu ggggaggagu cacaacccgg aaguccucuu cggucacgug     60

acuagucacg u                                                          71


<210> 20
<211> 85
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..85
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 20
ggccgugacg uncagnguca cgugaunggg gaugacuucc ggguuacacg ccguccuccn     60

ccacgugacg unugacguca cagcc                                           85


<210> 21
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 21
cgugacgunc agagucacgu gaccagggau gncuuccggg uuuaggcacg cccccanuca     60

cgugucucna aacgucacg                                                  79


<210> 22
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 22
gcagucacgu guannncann gucacgugac cgaggagaac uuccgggaug uaacuccucc     60

ccagucaggu gacuugugac guagcugc                                        88


<210> 23
<211> 76
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..76
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 23
acgugacnnn uanngucacg ugaccgaaga ggacuuccgg guugugacuc cuccccaguc     60

aggugacuug ugacgu                                                     76


<210> 24
<211> 76
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..76
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 24
acgugacnnn cannguuacg ugguugagga unacuucagu guuuaaguac cuccccaguc     60

acgugacuua ugacgu                                                     76


<210> 25
<211> 82
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..82
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 25
gccauuuugg gcaagnnccg nngaagugcu ccgccgccau uuugugagaa aguggaguug     60

cuuccgccuu acuuaaaaug gc                                              82


<210> 26
<211> 86
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..86
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 26
ccgccauuuu gggcaagnnc cgnngaagug cuccgccgcc auuuugugag aaaguggagc     60

ugcuuccgcc uuacuuaaaa uggcgg                                          86


<210> 27
<211> 86
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..86
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 27
ccgccauuuu gggcaagnnc cgnnggagug cuccgccgcc auuaugugag aggguggagc     60

ugcuuccgcc uuacuuaaaa uggcgg                                          86


<210> 28
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 28
gccuucauuu uggguaagnn ccgnngaagu gcuccgccga cauuuugunn auaugccgag     60

cugcuuccgc cuuacuuaaa auggcggc                                        88


<210> 29
<211> 80
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..80
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 29
ccauuuugag uagguguggc ugauggugac cuuugaacuc acgccaccgu ccgnnnnnnc     60

cucaacnnua cuuaagaugg                                                 80


<210> 30
<211> 80
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..80
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 30
ccauuuugug uagcuuccgu cgaggaugac cuuuaaccuc uancgucaau ccugannnnc     60

gucagcnnua cuuaaaaugg                                                 80


<210> 31
<211> 64
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..64
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 31
ccgccgcuac ngucacacuu ccucuuuuuu uuacaaaaag cggaaggaag ucacaagaug     60

gcgg                                                                  64


<210> 32
<211> 64
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..64
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 32
ccgccgcuac ugucauacuu ccucuuuuuu uuugaaaaag cggaaggaag ucacaagaug     60

gcgg                                                                  64


<210> 33
<211> 68
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..68
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 33
gccggggggc ugccgccccc cccggggaaa ggggggggcc ccccccgggg ggggguuugc     60

cccccggc                                                              68


<210> 34
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 34
gucgugacgu uugagacacg ugaugggggc gugccuaaac ccggaagcau cccuggucac     60

gugacucuga cgucacggc                                                  79


<210> 35
<211> 62
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..62
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 35
gcgggggggc ggccgcguuc gcgcgccgcc caccaggggg ugcugcgcgc ccccccccgc     60

gc                                                                    62


<210> 36
<211> 69
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..69
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 36
gugccuaccu cuuaagguca ccaagcacuc cgagcgucag cgaggagugc gacccuuggg     60

ggugggugc                                                             69


<210> 37
<211> 86
<212> DNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..86
<223> /mol_type="DNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 37
ggccgccatt ttaagtaagg cggaagcaac tccactttct cacaaaatgg cggcggagca     60

cttccggctt gcccaaaatg gccgcc                                          86


<210> 38
<211> 68
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..68
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 38
gccggggggc aaaccccccc ccgggggggg ccccccccuu uccccggggg gggcggcagc     60

cccccggc                                                              68


<210> 39
<211> 72
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..72
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 39
ccagaaggcg gcggccucgu acuccugcug ccagucuugg cugcugggua cggguuuugg     60

ggcccugucu gg                                                         72


<210> 40
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 40
cgcgcaugcg cgguggguuu agcacggggg ggggccgggg gggcggagcc cccccggggg     60

ggggccccgc gcaugcgcg                                                  79


<210> 41
<211> 64
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..64
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 41
gggggguccg aggcguccgg cgcagcgcga agcgcguagc gccggacccc gaggaaguug     60

cccc                                                                  64


<210> 42
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 42
gcugugnnna cgucnaacgu cacgugggga ggannncggc guguaacccg gaagucaucc     60

ccanucacgu gacncugacg uncacggc                                        88


<210> 43
<211> 87
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..87
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 43
gcugugnnac guanucaguc acgugggaag ggnnnugugc cuuaacccgg aagncauccc     60

uggucacgug acugugacgu ncgcggc                                         87


<210> 44
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 44
gcugugnnna cguanucagu cacgugggaa gggnnncgug ccuuaacccg gaagncaucc     60

cuggucacgu gacugugacg uncgcggc                                        88


<210> 45
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 45
gcugugnnna cguunuaagu cacgugggcg gggnnncgug ccuuaacccg gaagncaucc     60

cuggucacgu gacugugacg uncgcggc                                        88


<210> 46
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 46
gucgugnnna cguunugaga cacgugauug gggnnncgug ccuaaacccg gaagncaucc     60

cuggucacgu gacucugacg cncacggc                                        88


<210> 47
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 47
gucgugnnna cguunugaga cacgugaugg gggnnncgug ccuaaacccg gaagncaucc     60

cuggucacgu gacucugacg uncacggc                                        88


<210> 48
<211> 86
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..86
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 48
ucaucuauac gucauaaguc acgugggaag gggugugccc uuaaacccgg aagncauccu     60

cguccacgug acugugacgu guauga                                          86


<210> 49
<211> 86
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..86
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 49
ucauguguac gucauaaguc acgugagaag gggcgugccu uuaaauucgg aagncauccu     60

cguccacgug acugugacgu guauga                                          86


<210> 50
<211> 88
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..88
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 50
gcugugnnna cgucnaacgu cacgugggga ggannncggc guguaacccg gaagucaucc     60

ucanucacgu gacncugacg uncacggc                                        88


<210> 51
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 51
ccauuuuaag uaagcuccac ccaggacuga cguncangug ugaaagguca uccucggcgg     60

gaacuuacau gaaanuggc                                                  79


<210> 52
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 52
ccauuuuaag uaggugucgu ccaggacugc uguuccnggg ucagggggca uccucggcng     60

gaacuuacac aaaanuggc                                                  79


<210> 53
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 53
ccauuuuaag uaggugccgu ccaggacugc uguuccnggg ucagacggca uccucggcng     60

gaacuuacac aaaanuggc                                                  79


<210> 54
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 54
ccauuuugag uaggugccgu ccaggacucc uguuccnggg ucagagggca uccucggcng     60

gaacuuacac aaaanuggc                                                  79


<210> 55
<211> 78
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..78
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 55
ccauuuuaag uaggugccgu ccaggacugc uguuccnggg ucagagggca uccucggcng     60

gaaccugcac aaaauggu                                                   78


<210> 56
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 56
ccauuuuaag uaggugccgu ccaggacugc uguuccnggg ucagagggca uccucggcng     60

gaaccuacac aaaaaugga                                                  79


<210> 57
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 57
ccauuuuaag ucagcuucgg ggaggcauga cguguangun ucaaagguca uccucanccg     60

gaacuggcac aaaanuggc                                                  79


<210> 58
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 58
ccauuuuaag ucaacgcugg ggaggcguga cguacangun ucaaagguca uccucgnccg     60

gaacuggcac aaaanuggc                                                  79


<210> 59
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 59
ccauuuuaag ucagcgcugg ggaggaguga cguacangun ucaaagguca uccucgnucg     60

gaacuggcac aaaanuggc                                                  79


<210> 60
<211> 79
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..79
<223> /mol_type="RNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 60
ccauuuuaag uaagcaccgc cuaggacuga cguauaagun ucaaagguca uccucggccg     60

gaacuuacac aaaanuggu                                                  79


<210> 61
<211> 30
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..30
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 61
agcgattctg gtcgaggggg ggtccgaggc                                     30


<210> 62
<211> 37
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..37
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 62
gcccccgacc cccccgaggc cgcaggtccg aatcgcg                              37


<210> 63
<211> 37
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..37
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 63
acacgccgtc ctccccacgt gacgttgacg tcacagc                              37


<210> 64
<211> 37
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..37
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 64
gccgtgacgt caggtcacgt gatggggatg acttccg                              37


<210> 65
<211> 25
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..25
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 65
aagaggaagt gtgacgtagc ggcgg                                          25


<210> 66
<211> 27
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..27
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 66
cgccatcttg tgacttcctt ccgcttt                                        27


<210> 67
<211> 37
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..37
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 67
cggaagtcat ccccatcacg tgacctgacg tcacggc                              37


<210> 68
<211> 37
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..37
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 68
gctgtgacgt caacgtcacg tggggaggac ggcgtgt                              37


<210> 69
<211> 35
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..35
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 69
cactacctgc acgaacagca ctttggagcc cccag                                35


<210> 70
<211> 35
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..35
<223> /mol_type="DNA"
      /note="probe"
      /organism="artificial sequences"

<400> 70
ccgggggctc gggaagtgct agctcagcag taggt                                35


<210> 71
<211> 24
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..24
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 71
uaguuuuacn nnaccggggg auga                                           24


<210> 72
<211> 24
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..24
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 72
uucuuagugn nnuggugccc uaca                                           24


<210> 73
<211> 25
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..25
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 73
auguuaguuu uacaccgggg gauga                                          25


<210> 74
<211> 25
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..25
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 74
aacauucaag gacaggcguc cuaca                                          25


<210> 75
<211> 14
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..14
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 75
agaucagagg guga                                                      14


<210> 76
<211> 14
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..14
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 76
acuacacucc uaca                                                      14


<210> 77
<211> 11
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..11
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 77
aguccagugc a                                                         11


<210> 78
<211> 36
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..36
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 78
aucagaaucc agugaaaaag caaaaaguga ggauga                               36


<210> 79
<211> 36
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..36
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 79
aagucaaucc acacuaaaag caaaaagacu ccuaca                               36


<210> 80
<211> 32
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..32
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="artificial sequences"

<400> 80
uggncaccug cuguuucuaa aacagaggau gu                                   32


<210> 81
<211> 32
<212> RNA
<213> Torque teno virus

<220> 
<221> source
<222> 1..32
<223> /mol_type="mRNA"
      /note="miRNA"
      /organism="Torque teno virus"

<400> 81
uccngugcac cuguuucuaa aacacuccua cu                                   32


<210> 82
<211> 10848
<212> RNA
<213> Homo sapiens

<220> 
<221> source
<222> 1..10848
<223> /mol_type="mRNA"
      /note="adenomatous polyposis coli (APC)"
      /organism="Homo sapiens"

<400> 82
guauuggugc agcccgccag ggugucacug gagacagaau ggaggugcug ccggacucgg       60

aaauggggac acaugcauug guggccaaaa gagagaggag acaaaaccgc ugcagauggc      120

ugaugugaau cuaguggaaa gagcuacugg ggaugagaga aagaggagga ggcaggucca      180

aggguagcca aggauggcug cagcuucaua ugaucaguug uuaaagcaag uugaggcacu      240

gaagauggag aacucaaauc uucgacaaga gcuagaagau aauuccaauc aucuuacaaa      300

acuggaaacu gaggcaucua auaugaagga aguacuuaaa caacuacaag gaaguauuga      360

agaugaagcu auggcuucuu cuggacagau ugauuuauua gagcgucuua aagagcuuaa      420

cuuagauagc aguaauuucc cuggaguaaa acugcgguca aaaauguccc uccguucuua      480

uggaagccgg gaaggaucug uaucaagccg uucuggagag ugcaguccug uuccuauggg      540

uucauuucca agaagagggu uuguaaaugg aagcagagaa aguacuggau auuuagaaga      600

acuugagaaa gagaggucau ugcuucuugc ugaucuugac aaagaagaaa aggaaaaaga      660

cugguauuac gcucaacuuc agaaucucac uaaaagaaua gauagucuuc cuuuaacuga      720

aaauuuuucc uuacaaacag auaugaccag aaggcaauug gaauaugaag caaggcaaau      780

cagaguugcg auggaagaac aacuagguac cugccaggau auggaaaaac gagcacagcg      840

aagaauagcc agaauucagc aaaucgaaaa ggacauacuu cguauacgac agcuuuuaca      900

gucccaagca acagaagcag agaggucauc ucagaacaag caugaaaccg gcucacauga      960

ugcugagcgg cagaaugaag gucaaggagu gggagaaauc aacauggcaa cuucugguaa     1020

uggucagggu ucaacuacac gaauggacca ugaaacagcc aguguuuuga guucuaguag     1080

cacacacucu gcaccucgaa ggcugacaag ucaucuggga accaaggugg aaauggugua     1140

uucauuguug ucaaugcuug guacucauga uaaggaugau augucgcgaa cuuugcuagc     1200

uaugucuagc ucccaagaca gcuguauauc caugcgacag ucuggauguc uuccucuccu     1260

cauccagcuu uuacauggca augacaaaga cucuguauug uugggaaauu cccggggcag     1320

uaaagaggcu cgggccaggg ccagugcagc acuccacaac aucauucacu cacagccuga     1380

ugacaagaga ggcaggcgug aaauccgagu ccuucaucuu uuggaacaga uacgcgcuua     1440

cugugaaacc uguugggagu ggcaggaagc ucaugaacca ggcauggacc aggacaaaaa     1500

uccaaugcca gcuccuguug aacaucagau cuguccugcu guguguguuc uaaugaaacu     1560

uucauuugau gaagagcaua gacaugcaau gaaugaacua gggggacuac aggccauugc     1620

agaauuauug caaguggacu gugaaaugua ugggcuuacu aaugaccacu acaguauuac     1680

acuaagacga uaugcuggaa uggcuuugac aaacuugacu uuuggagaug uagccaacaa     1740

ggcuacgcua ugcucuauga aaggcugcau gagagcacuu guggcccaac uaaaaucuga     1800

aagugaagac uuacagcagg uuauugcgag uguuuugagg aauuugucuu ggcgagcaga     1860

uguaaauagu aaaaagacgu ugcgagaagu uggaagugug aaagcauuga uggaaugugc     1920

uuuagaaguu aaaaaggaau caacccucaa aagcguauug agugccuuau ggaauuuguc     1980

agcacauugc acugagaaua aagcugauau augugcugua gauggugcac uugcauuuuu     2040

gguuggcacu cuuacuuacc ggagccagac aaacacuuua gccauuauug aaaguggagg     2100

ugggauauua cggaaugugu ccagcuugau agcuacaaau gaggaccaca ggcaaauccu     2160

aagagagaac aacugucuac aaacuuuauu acaacacuua aaaucucaua guuugacaau     2220

agucaguaau gcauguggaa cuuuguggaa ucucucagca agaaauccua aagaccagga     2280

agcauuaugg gacauggggg caguuagcau gcucaagaac cucauucauu caaagcacaa     2340

aaugauugcu augggaagug cugcagcuuu aaggaaucuc auggcaaaua ggccugcgaa     2400

guacaaggau gccaauauua ugucuccugg cucaagcuug ccaucucuuc auguuaggaa     2460

acaaaaagcc cuagaagcag aauuagaugc ucagcacuua ucagaaacuu uugacaauau     2520

agacaauuua agucccaagg caucucaucg uaguaagcag agacacaagc aaagucucua     2580

uggugauuau guuuuugaca ccaaucgaca ugaugauaau aggucagaca auuuuaauac     2640

uggcaacaug acuguccuuu caccauauuu gaauacuaca guguuaccca gcuccucuuc     2700

aucaagagga agcuuagaua guucucguuc ugaaaaagau agaaguuugg agagagaacg     2760

cggaauuggu cuaggcaacu accauccagc aacagaaaau ccaggaacuu cuucaaagcg     2820

agguuugcag aucuccacca cugcagccca gauugccaaa gucauggaag aagugucagc     2880

cauucauacc ucucaggaag acagaaguuc ugggucuacc acugaauuac auugugugac     2940

agaugagaga aaugcacuua gaagaagcuc ugcugcccau acacauucaa acacuuacaa     3000

uuucacuaag ucggaaaauu caaauaggac auguucuaug ccuuaugcca aauuagaaua     3060

caagagaucu ucaaaugaua guuuaaauag ugucaguagu agugaugguu augguaaaag     3120

aggucaaaug aaacccucga uugaauccua uucugaagau gaugaaagua aguuuugcag     3180

uuauggucaa uacccagccg accuagccca uaaaauacau agugcaaauc auauggauga     3240

uaaugaugga gaacuagaua caccaauaaa uuauagucuu aaauauucag augagcaguu     3300

gaacucugga aggcaaaguc cuucacagaa ugaaagaugg gcaagaccca aacacauaau     3360

agaagaugaa auaaaacaaa gugagcaaag acaaucaagg aaucaaagua caacuuaucc     3420

uguuuauacu gagagcacug augauaaaca ccucaaguuc caaccacauu uuggacagca     3480

ggaauguguu ucuccauaca ggucacgggg agccaauggu ucagaaacaa aucgaguggg     3540

uucuaaucau ggaauuaauc aaaauguaag ccagucuuug ugucaagaag augacuauga     3600

agaugauaag ccuaccaauu auagugaacg uuacucugaa gaagaacagc augaagaaga     3660

agagagacca acaaauuaua gcauaaaaua uaaugaagag aaacgucaug uggaucagcc     3720

uauugauuau aguuuaaaau augccacaga uauuccuuca ucacagaaac agucauuuuc     3780

auucucaaag aguucaucug gacaaagcag uaaaaccgaa cauaugucuu caagcaguga     3840

gaauacgucc acaccuucau cuaaugccaa gaggcagaau cagcuccauc caaguucugc     3900

acagaguaga aguggucagc cucaaaaggc ugccacuugc aaaguuucuu cuauuaacca     3960

agaaacaaua cagacuuauu guguagaaga uacuccaaua uguuuuucaa gauguaguuc     4020

auuaucaucu uugucaucag cugaagauga aauaggaugu aaucagacga cacaggaagc     4080

agauucugcu aauacccugc aaauagcaga aauaaaagaa aagauuggaa cuaggucagc     4140

ugaagauccu gugagcgaag uuccagcagu gucacagcac ccuagaacca aauccagcag     4200

acugcagggu ucuaguuuau cuucagaauc agccaggcac aaagcuguug aauuuucuuc     4260

aggagcgaaa ucucccucca aaaguggugc ucagacaccc aaaaguccac cugaacacua     4320

uguucaggag accccacuca uguuuagcag auguacuucu gucaguucac uugauaguuu     4380

ugagagucgu ucgauugcca gcuccguuca gagugaacca ugcaguggaa ugguaagugg     4440

cauuauaagc cccagugauc uuccagauag cccuggacaa accaugccac caagcagaag     4500

uaaaacaccu ccaccaccuc cucaaacagc ucaaaccaag cgagaaguac cuaaaaauaa     4560

agcaccuacu gcugaaaaga gagagagugg accuaagcaa gcugcaguaa augcugcagu     4620

ucagaggguc cagguucuuc cagaugcuga uacuuuauua cauuuugcca cggaaaguac     4680

uccagaugga uuuucuuguu cauccagccu gagugcucug agccucgaug agccauuuau     4740

acagaaagau guggaauuaa gaauaaugcc uccaguucag gaaaaugaca augggaauga     4800

aacagaauca gagcagccua aagaaucaaa ugaaaaccaa gagaaagagg cagaaaaaac     4860

uauugauucu gaaaaggacc uauuagauga uucagaugau gaugauauug aaauacuaga     4920

agaauguauu auuucugcca ugccaacaaa gucaucacgu aaagcaaaaa agccagccca     4980

gacugcuuca aaauuaccuc caccuguggc aaggaaacca agucagcugc cuguguacaa     5040

acuucuacca ucacaaaaca gguugcaacc ccaaaagcau guuaguuuua caccggggga     5100

ugauaugcca cggguguauu guguugaagg gacaccuaua aacuuuucca cagcuacauc     5160

ucuaagugau cuaacaaucg aauccccucc aaaugaguua gcugcuggag aaggaguuag     5220

aggaggggca cagucaggug aauuugaaaa acgagauacc auuccuacag aaggcagaag     5280

uacagaugag gcucaaggag gaaaaaccuc aucuguaacc auaccugaau uggaugacaa     5340

uaaagcagag gaaggugaua uucuugcaga augcauuaau ucugcuaugc ccaaagggaa     5400

aagucacaag ccuuuccgug ugaaaaagau aauggaccag guccagcaag caucugcguc     5460

uucuucugca cccaacaaaa aucaguuaga ugguaagaaa aagaaaccaa cuucaccagu     5520

aaaaccuaua ccacaaaaua cugaauauag gacacgugua agaaaaaaug cagacucaaa     5580

aaauaauuua aaugcugaga gaguuuucuc agacaacaaa gauucaaaga aacagaauuu     5640

gaaaaauaau uccaaggucu ucaaugauaa gcucccaaau aaugaagaua gagucagagg     5700

aaguuuugcu uuugauucac cucaucauua cacgccuauu gaaggaacuc cuuacuguuu     5760

uucacgaaau gauucuuuga guucucuaga uuuugaugau gaugauguug accuuuccag     5820

ggaaaaggcu gaauuaagaa aggcaaaaga aaauaaggaa ucagaggcua aaguuaccag     5880

ccacacagaa cuaaccucca accaacaauc agcuaauaag acacaagcua uugcaaagca     5940

gccaauaaau cgaggucagc cuaaacccau acuucagaaa caauccacuu uuccccaguc     6000

auccaaagac auaccagaca gaggggcagc aacugaugaa aaguuacaga auuuugcuau     6060

ugaaaauacu ccgguuugcu uuucucauaa uuccucucug aguucucuca gugacauuga     6120

ccaagaaaac aacaauaaag aaaaugaacc uaucaaagag acugagcccc cugacucaca     6180

gggagaacca aguaaaccuc aagcaucagg cuaugcuccu aaaucauuuc auguugaaga     6240

uaccccaguu uguuucucaa gaaacaguuc ucucaguucu cuuaguauug acucugaaga     6300

ugaccuguug caggaaugua uaagcuccgc aaugccaaaa aagaaaaagc cuucaagacu     6360

caagggugau aaugaaaaac auagucccag aaauaugggu ggcauauuag gugaagaucu     6420

gacacuugau uugaaagaua uacagagacc agauucagaa cauggucuau ccccugauuc     6480

agaaaauuuu gauuggaaag cuauucagga aggugcaaau uccauaguaa guaguuuaca     6540

ucaagcugcu gcugcugcau guuuaucuag acaagcuucg ucugauucag auuccauccu     6600

uucccugaaa ucaggaaucu cucugggauc accauuucau cuuacaccug aucaagaaga     6660

aaaacccuuu acaaguaaua aaggcccacg aauucuaaaa ccaggggaga aaaguacauu     6720

ggaaacuaaa aagauagaau cugaaaguaa aggaaucaaa ggaggaaaaa aaguuuauaa     6780

aaguuugauu acuggaaaag uucgaucuaa uucagaaauu ucaggccaaa ugaaacagcc     6840

ccuucaagca aacaugccuu caaucucucg aggcaggaca augauucaua uuccaggagu     6900

ucgaaauagc uccucaagua caaguccugu uucuaaaaaa ggcccacccc uuaagacucc     6960

agccuccaaa agcccuagug aaggucaaac agccaccacu ucuccuagag gagccaagcc     7020

aucugugaaa ucagaauuaa gcccuguugc caggcagaca ucccaaauag gugggucaag     7080

uaaagcaccu ucuagaucag gaucuagaga uucgaccccu ucaagaccug cccagcaacc     7140

auuaaguaga ccuauacagu cuccuggccg aaacucaauu uccccuggua gaaauggaau     7200

aaguccuccu aacaaauuau cucaacuucc aaggacauca uccccuagua cugcuucaac     7260

uaaguccuca gguucuggaa aaaugucaua uacaucucca gguagacaga ugagccaaca     7320

gaaccuuacc aaacaaacag guuuauccaa gaaugccagu aguauuccaa gaagugaguc     7380

ugccuccaaa ggacuaaauc agaugaauaa ugguaaugga gccaauaaaa agguagaacu     7440

uucuagaaug ucuucaacua aaucaagugg aagugaaucu gauagaucag aaagaccugu     7500

auuaguacgc cagucaacuu ucaucaaaga agcuccaagc ccaaccuuaa gaagaaaauu     7560

ggaggaaucu gcuucauuug aaucucuuuc uccaucaucu agaccagcuu cucccacuag     7620

gucccaggca caaacuccag uuuuaagucc uucccuuccu gauaugucuc uauccacaca     7680

uucgucuguu caggcuggug gauggcgaaa acucccaccu aaucucaguc ccacuauaga     7740

guauaaugau ggaagaccag caaagcgcca ugauauugca cggucucauu cugaaagucc     7800

uucuagacuu ccaaucaaua ggucaggaac cuggaaacgu gagcacagca aacauucauc     7860

aucccuuccu cgaguaagca cuuggagaag aacuggaagu ucaucuucaa uucuuucugc     7920

uucaucagaa uccagugaaa aagcaaaaag ugaggaugaa aaacauguga acucuauuuc     7980

aggaaccaaa caaaguaaag aaaaccaagu auccgcaaaa ggaacaugga gaaaaauaaa     8040

agaaaaugaa uuuucuccca caaauaguac uucucagacc guuuccucag gugcuacaaa     8100

uggugcugaa ucaaagacuc uaauuuauca aauggcaccu gcuguuucua aaacagagga     8160

uguuugggug agaauugagg acugucccau uaacaauccu agaucuggaa gaucucccac     8220

agguaauacu cccccgguga uugacagugu uucagaaaag gcaaauccaa acauuaaaga     8280

uucaaaagau aaucaggcaa aacaaaaugu ggguaauggc aguguuccca ugcguaccgu     8340

ggguuuggaa aaucgccuga acuccuuuau ucagguggau gccccugacc aaaaaggaac     8400

ugagauaaaa ccaggacaaa auaauccugu cccuguauca gagacuaaug aaaguucuau     8460

aguggaacgu accccauuca guucuagcag cucaagcaaa cacaguucac cuagugggac     8520

uguugcugcc agagugacuc cuuuuaauua caacccaagc ccuaggaaaa gcagcgcaga     8580

uagcacuuca gcucggccau cucagauccc aacuccagug aauaacaaca caaagaagcg     8640

agauuccaaa acugacagca cagaauccag uggaacccaa aguccuaagc gccauucugg     8700

gucuuaccuu gugacaucug uuuaaaagag aggaagaaug aaacuaagaa aauucuaugu     8760

uaauuacaac ugcuauauag acauuuuguu ucaaaugaaa cuuuaaaaga cugaaaaauu     8820

uuguaaauag guuugauucu uguuagaggg uuuuuguucu ggaagccaua uuugauagua     8880

uacuuugucu ucacuggucu uauuuuggga ggcacucuug augguuagga aaaaaauagu     8940

aaagccaagu auguuuguac aguauguuuu acauguauuu aaaguagcau cccaucccaa     9000

cuuccuuuaa uuauugcuug ucuuaaaaua augaacacua cagauagaaa auaugauaua     9060

uugcuguuau caaucauuuc uagauuauaa acugacuaaa cuuacaucag ggaaaaauug     9120

guauuuaugc aaaaaaaaau guuuuugucc uugugagucc aucuaacauc auaauuaauc     9180

auguggcugu gaaauucaca guaauauggu ucccgaugaa caaguuuacc cagccugcuu     9240

ugcuuuacug caugaaugaa acugaugguu caauuucaga aguaaugauu aacaguuaug     9300

uggucacaug augugcauag agauagcuac aguguaauaa uuuacacuau uuugugcucc     9360

aaacaaaaca aaaaucugug uaacuguaaa acauugaaug aaacuauuuu accugaacua     9420

gauuuuaucu gaaaguaggu agaauuuuug cuaugcugua auuuguugua uauucuggua     9480

uuugagguga gauggcugcu cuuuuauuaa ugagacauga auugugucuc aacagaaacu     9540

aaaugaacau uucagaauaa auuauugcug uauguaaacu guuacugaaa uugguauuug     9600

uuugaagggu cuuguuucac auuuguauua auaauuguuu aaaaugccuc uuuuaaaagc     9660

uuauauaaau uuuuuucuuc agcuucuaug cauuaagagu aaaauuccuc uuacuguaau     9720

aaaaacaauu gaagaagacu guugccacuu aaccauucca ugcguuggca cuuaucuauu     9780

ccugaaauuu cuuuuaugug auuagcucau cuugauuuuu aauauuuuuc cacuuaaacu     9840

uuuuuuucuu acuccacugg agcucaguaa aaguaaauuc auguaauagc aaugcaagca     9900

gccuagcaca gacuaagcau ugagcauaau aggcccacau aauuuccucu uucuuaauau     9960

uauagaauuc uguacuugaa auugauucuu agacauugca gucucuucga ggcuuuacag    10020

uguaaacugu cuugccccuu caucuucuug uugcaacugg gucugacaug aacacuuuuu    10080

aucacccugu auguuagggc aagaucucag cagugaagua uaaucagcac uuugccaugc    10140

ucagaaaauu caaaucacau ggaacuuuag agguagauuu aauacgauua agauauucag    10200

aaguauauuu uagaaucccu gccuguuaag gaaacuuuau uugugguagg uacaguucug    10260

ggguacaugu uaaguguccc cuuauacagu ggagggaagu cuuccuuccu gaaggaaaau    10320

aaacugacac uuauuaacua agauaauuua cuuaauauau cuucccugau uuguuuuaaa    10380

agaucagagg gugacugaug auacaugcau acauauuugu ugaauaaaug aaaauuuauu    10440

uuuagugaua agauucauac acucuguauu uggggaggga aaaccuuuuu aagcauggug    10500

gggcacucag auaggaguga auacaccuac cuggugccuu gaaaaucaca ucaaguaguu    10560

aauuaucuac cccuuaccug uguuuauaac uuccagguaa ugagaaugau uuuuuuuaaa    10620

gcuaaaaugc caguaaauaa aagugcuaug acuugagcua agauauuuga cuccaaugcc    10680

uguacugugu cuacugcacc acuuuguaaa cacuucaauu uacuaucuuu gaaaugauug    10740

accuuuaaau uuuugccaaa uguuaucuga aauugucuau gaauaccauc uacuucuguu    10800

guuuucccag gcuuccauaa acaauggaga uacaugcaaa aaaaaaaa                 10848


<210> 83
<211> 33
<212> DNA
<213> artificial sequences

<220> 
<221> source
<222> 1..33
<223> /mol_type="DNA"
      /note="primer TT-ON9"
      /organism="artificial sequences"

<400> 83
gattatggta cctttccaac tacgactggg tgt                                  33


<210> 84
<211> 34
<212> RNA
<213> artificial sequences

<220> 
<221> source
<222> 1..34
<223> /mol_type="RNA"
      /note="primer TT-ON10"
      /organism="artificial sequences"

<400> 84
gauuauggua ccucuaccau ucgucaccgc uguu                                 34


