                         SEQUENCE LISTING

<110>  INSTITUT PASTEUR
       INSERM
       AP-HP
 
<120>  COMMON GENETIC VARIATIONS AT THE TCRA-TCRD LOCUS CONTROL THYMIC 
       FUNCTION IN HUMANS

<130>  BEP170052EP

<160>  49    

<170>  PatentIn version 3.5

<210>  1
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs3811236 single nucleotide polymorphism c or t (effect allele c)

<400>  1
agccctggag cctcagaacc acaggycctg tagttccctg ggtctggcaa a                51


<210>  2
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs2301199 single nucleotide polymorphism c or g (effect allele g)

<400>  2
cactatgtcc tggtaaagag gacccsagac ggcttcctga ttttcgtaca t                51


<210>  3
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs2301200 single nucleotide polymorphism c or t (effect allele c)

<400>  3
gtcacacact gaagcctgcc cctccyacct tccaccctgg tcagctaatc t                51


<210>  4
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (25)..(25)
<223>  rs3216790 single nucleotide polymorphism cg or c (effect allele 
       cg)

<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  n is a, c, g, or t

<400>  4
aagcaactct ctccttgagg ttatcnggga aatgaaggtt gaaacatgga t                51


<210>  5
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (25)..(25)
<223>  rs62762262 single nucleotide polymorphism t or tagtc (effect 
       allele tagtc)

<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  n is a, c, g, or t

<400>  5
attgttcata ccagctttct ctcttnaggc ctagaggaag gttgtttttg g                51


<210>  6
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs2331618 single nucleotide polymorphism a or g (effect allele a)

<400>  6
acatcaaaga atgtgaccac cttgartact tgctaatagt cctccaagag c                51


<210>  7
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs1109130 single nucleotide polymorphism g or a (effect allele g)

<400>  7
gctagatgag ctcaataaag atcagraaac tctggctcac atttggaaga c                51


<210>  8
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs2072616 single nucleotide polymorphism g or c (effect allele g)

<400>  8
acaggaagac ccaaggtaac acaatsactt tcatataccg agaaaaggac a                51


<210>  9
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs8012481 single nucleotide polymorphism a or g (effect allele g)

<400>  9
taaataattt aggaaatagg gaccaragaa agctagtgtt tctacctttc t                51


<210>  10
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs6572448 single nucleotide polymorphism t or a (effect allele t)

<400>  10
ctggtcttaa attcttgagc tcaagwgatg cccctgcctc ggccccccag a                51


<210>  11
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs2141988 single nucleotide polymorphism a or g (effect allele a)

<400>  11
ttcttcagga tatttgagtc ctctgrggct cctgggtaaa gactccaatg t                51


<210>  12
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs916052 single nucleotide polymorphism a or g (effect allele a)

<400>  12
aactacccag gaagcctcca ccagarcgca gcgtgagaat cagcttctta g                51


<210>  13
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs8021297 single nucleotide polymorphism t or c (effect allele t)

<400>  13
acaaagtgca aggagagaaa catttytgca aggagaaaaa taatgatgtg g                51


<210>  14
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs7492759 single nucleotide polymorphism g or a (effect allele g)

<400>  14
taattctatc agctgactgc cataarcatc catgagctag cattgattga g                51


<210>  15
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs2204984 single nucleotide polymorphism a or g (effect allele a)

<400>  15
ttacaatcac caatcagcac accacrtcca gttgctcttt ttaagtctag g                51


<210>  16
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (25)..(25)
<223>  rs71115550 single nucleotide polymorphism c or cataaa (effect 
       allele c)

<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  n is a, c, g, or t

<400>  16
acctacacag tatttctgac ataaantaaa taaactaaaa ctaatcaaac t                51


<210>  17
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (25)..(25)
<223>  rs201497432 single nucleotide polymorphism t or ta (effect allele
       t)

<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  n is a, c, g, or t

<400>  17
attacctaca cagtatttct gacatnaaat aaataaacta aaactaatca a                51


<210>  18
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs8013419 single nucleotide polymorphism a or g (effect allele a)

<400>  18
ctgcagacca gtgagcaaaa gtgatrcatg tttgttgctg taagcaattg a                51


<210>  19
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs10873018 single nucleotide polymorphism a or g (effect allele 
       g)

<400>  19
tctgggttaa gtgctcaccc ttttcrgaat tttcatagca tccagtactt a                51


<210>  20
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs12147006 single nucleotide polymorphism a or c (effect allele 
       a)

<400>  20
acaaacataa atttcctaaa actctmattt ttcctggaag cttagatttt c                51


<210>  21
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs2204985 single nucleotide polymorphism a or g (effect allele g)

<400>  21
agcaactggg aggaggtcaa tggagrggac acaattttaa atttacatga a                51


<210>  22
<211>  51
<212>  DNA
<213>  Homo sapiens


<220>
<221>  allele
<222>  (26)..(26)
<223>  rs11844715 single nucleotide polymorphism c or t  (effect allele 
       c)

<400>  22
tcctgggcat ggagggtggg gcgagygcaa gtagtccctg gtgttgcgat a                51


<210>  23
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  sjTREC-in-F oligonucleotide primer

<400>  23
cacatccctt tcaaccatgc t                                                 21


<210>  24
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  sjTREC-in-R oligonucleotide primer

<400>  24
gccagctgca gggtttagg                                                    19


<210>  25
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  ALB-in-F oligonucleotide primer

<400>  25
gctgtcatct cttgtgggct gt                                                22


<210>  26
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  ALB-in-R oligonucleotide primer

<400>  26
actcatggga gctgctggtt c                                                 21


<210>  27
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  1.1-in oligonucleotide primer

<400>  27
tgtcctccat cctagccagg                                                   20


<210>  28
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  1.2-in oligonucleotide primer

<400>  28
tccgtcacag ggaaaagtgg                                                   20


<210>  29
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  1.3-in oligonucleotide primer

<400>  29
tgtccctgtg agggaagagt t                                                 21


<210>  30
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  1.4-in oligonucleotide primer

<400>  30
tggacttggg gaggcagga                                                    19


<210>  31
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  1.5-in oligonucleotide primer

<400>  31
ctcataaaat gtgggtcagt gga                                               23


<210>  32
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  1.6-in oligonucleotide primer

<400>  32
tgaatccagg cagagaaagg                                                   20


<210>  33
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  2.1-in oligonucleotide primer

<400>  33
ccagctaact cgagacagga a                                                 21


<210>  34
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  2.2-in oligonucleotide primer

<400>  34
gaaccctgtt cttaggggag t                                                 21


<210>  35
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  2.3-in oligonucleotide primer

<400>  35
tgagaggggc tgtgctgaga                                                   20


<210>  36
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  2.4-in oligonucleotide primer

<400>  36
aagcgggggc tcccgctgaa                                                   20


<210>  37
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  Db1-in oligonucleotide primer

<400>  37
tgtgacccag gaggaaagaa g                                                 21


<210>  38
<211>  17
<212>  DNA
<213>  artificial sequence

<220>
<223>  Db2-in oligonucleotide primer

<400>  38
ggaccagccc cagagaa                                                      17


<210>  39
<211>  30
<212>  DNA
<213>  artificial sequence

<220>
<223>  sjTREC oligonucleotide probe

<400>  39
acacctctgg tttttgtaaa ggtgcccact                                        30


<210>  40
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  sjTREC-LNA oligonucleotide probe

<400>  40
acacctctgg tttttgtaaa ggtg                                              24


<210>  41
<211>  26
<212>  DNA
<213>  artificial sequence

<220>
<223>  Alb oligonucleotide probe

<400>  41
cctgtcatgc ccacacaaat ctctcc                                            26


<210>  42
<211>  25
<212>  DNA
<213>  artificial sequence

<220>
<223>  Db1 oligonucleotide probe

<400>  42
caaaaacctc tctggcggtc ccaac                                             25


<210>  43
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  Db2 oligonucleotide probe

<400>  43
cccacccagc tcagggaatg ca                                                22


<210>  44
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  oligonucleotide primer

<400>  44
aagtgccctc ttgcacata                                                    19


<210>  45
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  oligonucleotide primer

<400>  45
ctcgacttaa acttcttccc                                                   20


<210>  46
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  oligonucleotide primer

<400>  46
tgggactggt gacaattgtc                                                   20


<210>  47
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  oligonucleotide primer

<400>  47
gagtacaggt gtgcagctct                                                   20


<210>  48
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  oligonucleotide primer

<400>  48
gggactccaa gcttcaatca                                                   20


<210>  49
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  oligonucleotide primer

<400>  49
tggaggagga agaaaagcaa                                                   20


