                         SEQUENCE LISTING

<110>  INSTITUT PASTEUR
 
<120>  LIVE IMAGING SYSTEM TO VISUALIZE THE RETRO-TRANSCRIBED VIRAL DNA 
       GENOME

<130>  B14296WO CS

<150>  US 62/846,201
<151>  2019-05-10

<160>  33    

<170>  PatentIn version 3.5

<210>  1
<211>  14
<212>  DNA
<213>  artificial

<220>
<223>  consensus


<220>
<221>  misc_feature
<222>  (1)..(6)
<223>  n is a, t, g or c

<220>
<221>  misc_feature
<222>  (9)..(14)
<223>  n is a, t, g or c

<400>  1
nnnnnncgnn nnnn                                                         14


<210>  2
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  consensus


<220>
<221>  misc_feature
<222>  (1)..(2)
<223>  n is a, g, c or t

<220>
<221>  misc_feature
<222>  (4)..(7)
<223>  n is a, g, c or t

<220>
<221>  misc_feature
<222>  (10)..(13)
<223>  n is a, g, c or t

<220>
<221>  misc_feature
<222>  (15)..(16)
<223>  n is a, g, c or t

<400>  2
nntnnnncgn nnnann                                                       16


<210>  3
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  consensus


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  n is g, c or t

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  n is t or g

<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  n is a or t

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is t or c

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is g or a

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is t or c

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is g or a

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  n is a or t

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is a or c

<400>  3
nttnnnncgn nnnaac                                                       16


<210>  4
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  ANCH motif

<400>  4
gtttatgcgc ataaac                                                       16


<210>  5
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  ANCH motif

<400>  5
ctttatgcgc ataaac                                                       16


<210>  6
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  ANCH motif

<400>  6
gttgtcacgt gacaac                                                       16


<210>  7
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  ANCH motif

<400>  7
tttgtcacgt gacaac                                                       16


<210>  8
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  ANCH motif

<400>  8
cttgtcacgt gacaac                                                       16


<210>  9
<211>  59
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  9
ggggattgta gggaattcca aattcctgct tttacactcg gacctcgtcg acatgcatt        59


<210>  10
<211>  58
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  10
cttttagctg acatttatca cagctggcta ttacactcgg acctcgtcga catgcatt         58


<210>  11
<211>  55
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  11
gtgtgctggt acccatgcca gatagactta cactcggacc tcgtcgacat gcatt            55


<210>  12
<211>  60
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  12
aatactggag tattgtatgg attttcaggc ccttacactc ggacctcgtc gacatgcatt       60


<210>  13
<211>  60
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  13
ttttactggt acagtctcaa tagggctaat ggttacactc ggacctcgtc gacatgcatt       60


<210>  14
<211>  60
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  14
tatgttgaca ggtgtaggtc ctactaatac tgttacactc ggacctcgtc gacatgcatt       60


<210>  15
<211>  54
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  15
ctaatcctca tcctgtctac ttgccattac actcggacct cgtcgacatg catt             54


<210>  16
<211>  56
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  16
caatcatcac ctgccatctg ttttccattt acactcggac ctcgtcgaca tgcatt           56


<210>  17
<211>  58
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  17
tttccaaagt ggatttctgc tgtccctgta ttacactcgg acctcgtcga catgcatt         58


<210>  18
<211>  59
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  18
ttgtggatga atactgccat ttgtactgct gttacactcg gacctcgtcg acatgcatt        59


<210>  19
<211>  58
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  19
ttaagatgtt cagcctgatc tcttacctgt ttacactcgg acctcgtcga catgcatt         58


<210>  20
<211>  56
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  20
tacagtctac ttgtccatgc atggcttctt acactcggac ctcgtcgaca tgcatt           56


<210>  21
<211>  57
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  21
tcatgttcat cttgggcctt atctattcct tacactcgga cctcgtcgac atgcatt          57


<210>  22
<211>  60
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  22
tgtcagttag ggtgacaact ttttgtcttc ctttacactc ggacctcgtc gacatgcatt       60


<210>  23
<211>  57
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  23
tgctcctact atgggttctt tctctaactt tacactcgga cctcgtcgac atgcatt          57


<210>  24
<211>  60
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  24
tctgttagtg ctttggttcc tctaaggagt ttttacactc ggacctcgtc gacatgcatt       60


<210>  25
<211>  59
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  25
ctgtatgtca ttgacagtcc agctgtcttt tttacactcg gacctcgtcg acatgcatt        59


<210>  26
<211>  54
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  26
tggcagcact ataggctgta ctgtccttac actcggacct cgtcgacatg catt             54


<210>  27
<211>  60
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  27
tctgatgttt tttgtctggt gtggtaagtc ccttacactc ggacctcgtc gacatgcatt       60


<210>  28
<211>  55
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  28
cctcaacaga tgttgtctca gctcctctta cactcggacc tcgtcgacat gcatt            55


<210>  29
<211>  54
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  29
attgctggtg atcctttcca tccctgttac actcggacct cgtcgacatg catt             54


<210>  30
<211>  60
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  30
tttctttttt aaccctgcgg gatgtggtat tcttacactc ggacctcgtc gacatgcatt       60


<210>  31
<211>  56
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  31
tttaactttt gggccatcca ttcctggctt acactcggac ctcgtcgaca tgcatt           56


<210>  32
<211>  58
<212>  DNA
<213>  artificial

<220>
<223>  probe

<400>  32
ccctatcttt attgtgacga ggggtcgttg ttacactcgg acctcgtcga catgcatt         58


<210>  33
<211>  354
<212>  PRT
<213>  Burkholderia cenocepacia

<400>  33

Met Lys Pro Ser Gln Phe Ala Lys Gly Phe Gln Ala Arg Pro Asp Ile 
1               5                   10                  15      


Thr Thr Ser Glu Lys Arg Thr Ala Leu Asp Arg Leu Asn Ala Ile Asp 
            20                  25                  30          


Gly Ile Val Lys Ser Glu Thr Pro Thr Pro Ala Pro Thr Lys Ser Ala 
        35                  40                  45              


Lys Lys Asp Ile Ala Pro Pro Pro Ala Pro Glu Phe Thr Ile Asp Pro 
    50                  55                  60                  


Ser Ile Asp Glu Ser Gln Gln Tyr Arg Ala Trp Arg Leu Glu Asn Arg 
65                  70                  75                  80  


Tyr Ala Pro Gly Gln Val Ile Glu Leu Pro Leu Lys Ala Ile Lys His 
                85                  90                  95      


Ser Pro Phe Asn Pro Arg His Phe Tyr Leu Lys Ser Ser Ile Ala Glu 
            100                 105                 110         


Leu Ala Val Asn Leu Ala Lys Gln Gly Gln Gln Gln Ala Ile His Val 
        115                 120                 125             


Ile Pro Asp Tyr Asp Asn Pro Gly Thr Tyr Phe Val Ser Asp Gly Gly 
    130                 135                 140                 


Arg Arg Val Arg Ala Leu Lys Glu Ala Asn Lys Glu Ser Val Lys Ala 
145                 150                 155                 160 


Ile Val Ile Asp Val Pro Ile Gly Ile Gln Ser Tyr Lys Leu Gly Tyr 
                165                 170                 175     


Asp Leu Asn Val Gln Arg Asp Ser Gln Thr Val Phe Asp Asn Ala Val 
            180                 185                 190         


Val Trp Arg Arg Phe Leu Asp Asp Lys His Phe Gln Ser Gln Lys Glu 
        195                 200                 205             


Leu Ser Glu His Leu Gly Leu Asp Glu Ser Thr Val Ala Val Ala Leu 
    210                 215                 220                 


Ser Ile Gly Lys Leu Pro Glu Ala Ile Met Gln Glu Met Val Ala Arg 
225                 230                 235                 240 


Pro Asp Arg Phe Gly Ser Asn Met Ala Tyr Gln Val Gly Arg Tyr His 
                245                 250                 255     


Asn Ala Arg Gly Thr Glu Ala Thr Leu Arg Leu Ile Asn Lys Ile Val 
            260                 265                 270         


Ser Asp Asp Leu Ser Thr Arg Gln Val Ser Asp Ile Val Lys Gly Arg 
        275                 280                 285             


Val Ala Ala Gln Glu Thr Pro Lys Pro Ala Gly Arg Gln Arg Tyr Ala 
    290                 295                 300                 


Gln Arg Leu Glu Ile Lys Leu Gly Gly Lys Ser Val Gly Asp Leu Lys 
305                 310                 315                 320 


Ser Tyr Gly Glu Asp Arg Ile Glu Leu Arg Leu Arg Gly Leu Pro Lys 
                325                 330                 335     


Asp Lys Arg Asp Ala Ile Leu Glu Gln Leu Glu Arg Met Leu Leu Ser 
            340                 345                 350         


Glu His 
        


