                         SEQUENCE LISTING

<110>  The Scripps Research Institute
 
<120>  EFFICIENT RNA SWITCHES AND RELATED EXPRESSION SYSTEMS

<130>  1961.1PC

<140>  PCT/US20/055495
<141>  2020-10-14

<150>  US 61/915,258
<151>  2019-10-15

<160>  48    

<170>  PatentIn version 3.5

<210>  1
<211>  63
<212>  RNA
<213>  Schistosoma mansoni

<400>  1
ccuaaccuau gguccuggug agucccaaau aggacgaaac gccggcgucg accaucaugu       60

agg                                                                     63


<210>  2
<211>  99
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  2
gcggccgccu gagaugcagg uacauccagc ugaugagucc caaauaggac gaaacgcgcu       60

ucggugcguc cuggauucca cugcuaucca cgcggccgc                              99


<210>  3
<211>  97
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Artificial sequence   Synthetic sequence

<400>  3
ccgcggcuga gaugcaggua caucccacug augaguccca aauaggacga aacgcgcuuc       60

ggugcgucug ggauuccacu gcuauccacg cggccgc                                97


<210>  4
<211>  99
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  4
gcggccgccu gaggugcagg uacauccagc ugacgagucc caaauaggac gaaacgcgcu       60

ucggugcguc cuggauucca cugcuaucca cgcggccgc                              99


<210>  5
<211>  83
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  5
cugaggugca gguacaucca gcugacgagu cccaaauagg acgaaacgcg cuucggugcg       60

uccuggauuc cacugcuauc cac                                               83


<210>  6
<211>  64
<212>  RNA
<213>  Satellite tobacco ringspot virus

<400>  6
gggagcccug ucaccggaug ugcuuuccgg ucugaugagu ccgugaggac gaaacagggc       60

uccc                                                                    64


<210>  7
<211>  54
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  7
gcgcgucacc ggaugugcuu uccggucuga ugaguccgug aggaugaaac gcgc             54


<210>  8
<211>  89
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  8
accggugcgu ccuggauucc acugcuaucc auucgugagg ugcagguaca uccagcugac       60

gagucccaaa uaggacgaaa cgcgccggu                                         89


<210>  9
<211>  81
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  9
gcgcguccug gauuccacug cuauccauuc gugaggugca gguacaucca gcugacgagu       60

cccaaauagg acgaaacgcg c                                                 81


<210>  10
<211>  81
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  10
cggcguccug gauuccacug cuauccauuc gugaggugca gguacaucca gcugacgagu       60

cccaaauagg acgaaacgcc g                                                 81


<210>  11
<211>  69
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  11
gcgcguccug gauuccacug cuucggcagg uacauccagc ugacgagucc caaauaggac       60

gaaacgcgc                                                               69


<210>  12
<211>  65
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  12
gcgcguccug gauuccacuu ucgagguaca uccagcugac gagucccaaa uaggacgaaa       60

cgcgc                                                                   65


<210>  13
<211>  63
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  13
gcgcguccug gauuccacuu cggguacauc cagcugacga gucccaaaua ggacgaaacg       60

cgc                                                                     63


<210>  14
<211>  61
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  14
gcgcguccug gauuccauuc gguacaucca gcugacgagu cccaaauagg acgaaacgcg       60

c                                                                       61


<210>  15
<211>  63
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  15
gcgcguccug gauucgcauu cgcguacauc cagcugacga gucccaaaua ggacgaaacg       60

cgc                                                                     63


<210>  16
<211>  65
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  16
gcgcguccug gauucgcgau uccgcguaca uccagcugac gagucccaaa uaggacgaaa       60

cgcgc                                                                   65


<210>  17
<211>  67
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  17
gcgcguccug gauucgcgca uucgcgcgua cauccagcug acgaguccca aauaggacga       60

aacgcgc                                                                 67


<210>  18
<211>  65
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  18
gcgcguccug gauucgcguu cgcgcguaca uccagcugac gagucccaaa uaggacgaaa       60

cgcgc                                                                   65


<210>  19
<211>  65
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  19
gcgcguccug gauucgcgga aacgcguaca uccagcugac gagucccaaa uaggacgaaa       60

cgcgc                                                                   65


<210>  20
<211>  65
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  20
gcgcguccug gauucgcguc accgcguaca uccagcugac gagucccaaa uaggacgaaa       60

cgcgc                                                                   65


<210>  21
<211>  70
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  21
gcgcguccug gauucgcgag aggaggccgc guacauccag cugacgaguc ccaaauagga       60

cgaaacgcgc                                                              70


<210>  22
<211>  72
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  22
gcgcguccug gauucggcca gaggaggcgg ccguacaucc agcugacgag ucccaaauag       60

gacgaaacgc gc                                                           72


<210>  23
<211>  44
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  23
cuggauucca cugcuaucca uucgugaggu gcagguacau ccag                        44


<210>  24
<211>  44
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  24
cuggauucca cugcuaucca uucgugaggu gcagguacau ccag                        44


<210>  25
<211>  28
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  25
cuggauucca cuuucgaggu acauccag                                          28


<210>  26
<211>  26
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  26
cuggauucca cuucggguac auccag                                            26


<210>  27
<211>  24
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  27
cuggauucca uucgguacau ccag                                              24


<210>  28
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  28
cuggauuccu ucguacaucc ag                                                22


<210>  29
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  29
cuggauuccu ucuuacaucc ag                                                22


<210>  30
<211>  26
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  30
cuggauucgc auucgcguac auccag                                            26


<210>  31
<211>  28
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  31
cuggauucgc gauuccgcgu acauccag                                          28


<210>  32
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  32
cuggauucgc gcauucgcgc guacauccag                                        30


<210>  33
<211>  28
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  33
cuggauucgc gauuccgcgu acauccag                                          28


<210>  34
<211>  28
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  34
cuggauucgc guucgcgcgu acauccag                                          28


<210>  35
<211>  28
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  35
cuggauucgc ggaaacgcgu acauccag                                          28


<210>  36
<211>  28
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  36
cuggauucgc gucaccgcgu acauccag                                          28


<210>  37
<211>  33
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  37
cuggauucgc gagaggaggc cgcguacauc cag                                    33


<210>  38
<211>  35
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  38
cuggauucgg ccagaggagg cggccguaca uccag                                  35


<210>  39
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  39
cgaatggata gcagtggaat ccagg                                             25


<210>  40
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  40
ctggatgtac ctgcacctca cgaat                                             25


<210>  41
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  41
ggactcgtca gctggatgta cctgc                                             25


<210>  42
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  42
ttcgtcctat ttgggactcg tcagc                                             25


<210>  43
<211>  24
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  43
gatgtacccg aagtggaatc cagg                                              24


<210>  44
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  44
gtacccgaag tggaatccag gacgc                                             25


<210>  45
<211>  22
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  45
cgtttccgcg aatccaggac gc                                                22


<210>  46
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  46
gccgcctcct ctggccgaat ccagg                                             25


<210>  47
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  47
gatagcagtg gaatccagga cgcac                                             25


<210>  48
<211>  25
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Synthetic sequence

<400>  48
gcgtcctgga ttccacttcg ggtac                                             25


