                         SEQUENCE LISTING

<110>  Imperial College Innovations Limited
 
<120>  METHOD FOR IDENTIFYING RNA BINDING PROTEIN BINDING SITES ON RNA

<130>  P65940WO

<150>  GB 2006803.7
<151>  2021-05-07

<160>  30    

<170>  PatentIn version 3.5

<210>  1
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor

<400>  1
agatcggaag agcacacg                                                     18


<210>  2
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor


<220>
<221>  misc_feature
<222>  (2)..(10)

<220>
<221>  misc_feature
<222>  (2)..(10)
<223>  n is a, c, g, or t

<400>  2
annnnnnnnn agatcggaag agcacacg                                          28


<210>  3
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor


<220>
<221>  misc_feature
<222>  (2)..(12)

<220>
<221>  misc_feature
<222>  (2)..(12)
<223>  n is a, c, g, or t

<400>  3
annnnnnnnn nnagatcgga agagcacacg                                        30


<210>  4
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor


<220>
<221>  misc_feature
<222>  (1)..(10)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (2)..(10)

<400>  4
nnnnnnnnnn agatcggaag agcacacg                                          28


<210>  5
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor


<220>
<221>  misc_feature
<222>  (2)..(10)

<220>
<221>  misc_feature
<222>  (2)..(10)
<223>  n is a, c, g, or t

<400>  5
annnnnnnnn agatcggaag agcacacg                                          28


<210>  6
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor

<400>  6
agatcggaag agcacacg                                                     18


<210>  7
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor


<220>
<221>  misc_feature
<222>  (2)..(12)

<220>
<221>  misc_feature
<222>  (2)..(12)
<223>  n is a, c, g, or t

<400>  7
annnnnnnnn nnagatcgga agagcacacg                                        30


<210>  8
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNA-binding adaptor


<220>
<221>  misc_feature
<222>  (1)..(10)

<220>
<221>  misc_feature
<222>  (1)..(10)
<223>  n is a, c, g, or t

<400>  8
nnnnnnnnnn agatcggaag agcacacg                                          28


<210>  9
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RT primer

<400>  9
cgtgtgctct tccga                                                        15


<210>  10
<211>  12
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RT primer

<400>  10
cgtgtgctct tc                                                           12


<210>  11
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  cDNA-binding adaptor


<220>
<221>  misc_feature
<222>  (2)..(8)

<220>
<221>  misc_feature
<222>  (2)..(8)
<223>  n is a, c, g, or t

<400>  11
annnnnnnag atcggaagag cgtcgtg                                           27


<210>  12
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  cDNA-binding adaptor


<220>
<221>  misc_feature
<222>  (1)..(7)

<220>
<221>  misc_feature
<222>  (1)..(7)
<223>  n is a, c, g, or t

<400>  12
nnnnnnnaga tcggaagagc gtcgtg                                            26


<210>  13
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  cDNA-binding adaptor

<400>  13
agatcggaag agcgtcgtg                                                    19


<210>  14
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Forward primer

<400>  14
aatgatacgg cgaccaccga gatctacact atagcctaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  15
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Forward primer

<400>  15
aatgatacgg cgaccaccga gatctacaca tagaggcaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  16
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Forward primer

<400>  16
aatgatacgg cgaccaccga gatctacacc ctatcctaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  17
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Forward primer

<400>  17
aatgatacgg cgaccaccga gatctacacg gctctgaaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  18
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Forward primer

<400>  18
aatgatacgg cgaccaccga gatctacaca ggcgaagaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  19
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Forward primer

<400>  19
aatgatacgg cgaccaccga gatctacact aatcttaaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  20
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reverse primer

<400>  20
caagcagaag acggcatacg agatcgagta atgtgactgg agttcagacg tgtgctcttc       60

cgatct                                                                  66


<210>  21
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reverse primer

<400>  21
caagcagaag acggcatacg agattctccg gagtgactgg agttcagacg tgtgctcttc       60

cgatct                                                                  66


<210>  22
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reverse primer

<400>  22
caagcagaag acggcatacg agataatgag cggtgactgg agttcagacg tgtgctcttc       60

cgatct                                                                  66


<210>  23
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reverse primer

<400>  23
caagcagaag acggcatacg agatggaatc tcgtgactgg agttcagacg tgtgctcttc       60

cgatct                                                                  66


<210>  24
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reverse primer

<400>  24
caagcagaag acggcatacg agatttctga atgtgactgg agttcagacg tgtgctcttc       60

cgatct                                                                  66


<210>  25
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reverse primer

<400>  25
caagcagaag acggcatacg agatacgaat tcgtgactgg agttcagacg tgtgctcttc       60

cgatct                                                                  66


<210>  26
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Indexed P5 primer

<400>  26
aatgcacaca ctacacgacg ctcttccgat ct                                     32


<210>  27
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  L5 adapter


<220>
<221>  misc_feature
<222>  (20)..(26)

<220>
<221>  misc_feature
<222>  (20)..(26)
<223>  n is a, c, g, or t

<400>  27
gtgctgcgag aaggctagan nnnnnna                                           27


<210>  28
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  L7-cy5 adapter


<220>
<221>  misc_feature
<222>  (2)..(10)

<220>
<221>  misc_feature
<222>  (2)..(10)
<223>  n is a, c, g, or t

<400>  28
annnnnnnnn agatcggaag agcacacg                                          28


<210>  29
<211>  12
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Universal reverse transcription primer

<400>  29
cttctcgtgt gc                                                           12


<210>  30
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Indexed P7 primer

<400>  30
tctagccttc tcgtgtgcca gagtgtagga ac                                     32


