               SEQUENCE LISTING

<110> Max-Delbrueck-Centrum fuer Molekulare Medizin

<120> Method for nucleic acid detection by oligo hybridization and PCR-based amplification

<130> 12576 P 6581 WO

<160> 11

<170> BiSSAP 1.3.6

<210> 1
<211> 34
<212> DNA
<213> Artificial Sequence


<220> 
<223> GAT-7N

<220> 
<221> primer_bind
<222> 28..34
<223> /note="WGA degenerated primer sequence"

<400> 1
gtgagtgatg gttgaggtag tgtggagnnn nnnn                                 34


<210> 2
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> GAT-COM

<400> 2
gtgagtgatg gttgaggtag tgtggag                                        27


<210> 3
<211> 20
<212> DNA
<213> Artificial Sequence


<220> 
<223> OL66 Probe primer Forward

<400> 3
ggcacaacgt tgcagcacag                                                20


<210> 4
<211> 20
<212> DNA
<213> Artificial Sequence


<220> 
<223> OL66/OL1823 Probe primer Reverse

<400> 4
caccaacgct accagctccg                                                20


<210> 5
<211> 53
<212> DNA
<213> Artificial Sequence


<220> 
<223> OL66 Probe Primer A MeRev Forward

<400> 5
tcgtcggcag cgtcagatgt gtataagaga cagggcacaa cgttgcagca cag            53


<210> 6
<211> 54
<212> DNA
<213> Artificial Sequence


<220> 
<223> OL66/OL1823 Probe Primer B MeRev Reverse

<400> 6
gtctcgtggg ctcggagatg tgtataagag acagcaccaa cgctaccagc tccg           54


<210> 7
<211> 20
<212> DNA
<213> Artificial Sequence


<220> 
<223> OL1823 Probe primer Forward

<400> 7
gaccagccca catcgcactg                                                20


<210> 8
<211> 53
<212> DNA
<213> Artificial Sequence


<220> 
<223> OL1823 Probe Primer A MeRev Forward

<400> 8
tcgtcggcag cgtcagatgt gtataagaga caggaccagc ccacatcgca ctg            53


<210> 9
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> PNA sequence

<400> 9
gtgagtgatg gttgaggtag tgtggag                                        27


<210> 10
<211> 48
<212> DNA
<213> Artificial Sequence


<220> 
<223> OL1823 UMI append

<220> 
<221> misc_feature
<222> 21..28
<223> /note="unspecified nucleotide"

<400> 10
gaccagccca catcgcactg nnnnnnnngg cacaacgttg cagcacag                  48


<210> 11
<211> 48
<212> DNA
<213> Artificial Sequence


<220> 
<223> UMI tools extract bc pattern

<220> 
<221> misc_feature
<222> 21..28
<223> /note="unspecified nucleotide"

<400> 11
cccccccccc cccccccccc nnnnnnnncc cccccccccc cccccccc                  48


