

Sequence Listing


<110> Bundesrepublik Deutschland, vertreten durch den Bundesminister fur Wirtschaft 
und Energie, dieser vertreten durch den Praesidenten der Bundesanstalt fur 
Materialforschung und -pruefung, (BAM)
<120> Particles Consisting of an Organic Polymer Core, a Magnetic First Inorganic Shell and a Mesoporous Second Inorganic Shell
<130> 
<140> 
<141> 
<150> 
<151> 
<160> 17

<210> 1 
<211> 18
<212> DNA
<213> artificial sequence
<220>
<223> 5-C6-Amino Linker - cDNA
<300>
<301> Dominik Sarma, Kornelia Gawlitza and Knut Rurack
<302> Polystyrene CoreSilica Shell Particles with Defined Nanoarchitectures as a Versatile Platform for Suspension Array Technology
<303> Langmuir
<304> 32
<305> 15
<306> 3717-3727 
<307> 2016 03 26
<308> 10.1021/acs.langmuir.6b00373
<309> 2016 02 02
<400> 1 tttatgtcgt ttgctgta 18


<210> 2 
<211> 12
<212> DNA
<213> artificial sequence
<220>
<223> 5-carboxy C10 linker - c9DNA
<400> 2 tttatgtcgt tt 12


<210> 3 
<211> 18
<212> DNA
<213> artificial sequence
<220>
<223> 5-carboxy C10 linker - c15DNA
<400> 3 tttatgtcgt ttgctgta 18


<210> 4
<211> 15
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification - tDNA
<300>
<301> Dominik Sarma, Kornelia Gawlitza and Knut Rurack
<302> Polystyrene CoreSilica Shell Particles with Defined Nanoarchitectures as a Versatile Platform for Suspension Array Technology
<303> Langmuir
<304> 32
<305> 15
<306> 3717-3727 
<307> 2016 03 26
<308> 10.1021/acs.langmuir.6b00373
<309> 2016 02 02
<400> 4 tacagcaaac gacat 15



<210> 5 
<211> 9
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification - tDNA
<400> 5 aaacgacat 9


<210> 6 
<211> 15
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification, one mismatching Base comparing to tDNA - t-DNA-1M-Center
<400> 6 tacagcagac gacat 15



<210> 7 
<211> 15
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification, one mismatching Base comparing to tDNA - t-DNA-1M-3End
<400> 7 tacagcaaac gacgt 15


<210> 8 
<211> 15
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification, two mismatching Bases comparing to tDNA - t-DNA-2M
<400> 8 tacagcagac gacgt 15


<210> 9 
<211> 15
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification, four mismatching Bases comparing to tDNA - t-DNA-4M
<400> 9 tgcagcagac ggcgt 15



<210> 10 
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> 5-C6-Amino Linker - HPV6
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 10 ttttccgtaa ctacatcttc ca 22


<210> 11 
<211> 19
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification - HPV6RC
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 11 tggaagatgt agttacgga 19


<210> 12 
<211> 23
<212> DNA
<213> artificial sequence
<220>
<223> 5-C6-Amino Linker - HPV11
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 12 ttttctgtgt ctaaatctgc tac 23


<210> 13 
<211> 20
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification - HPV11RC
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 13 gtagcagatt tagacacaga 20


<210> 14 
<211> 21
<212> DNA
<213> artificial sequence
<220>
<223> 5-C6-Amino Linker - HPV16
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 14 ttttacctac gacatgggga g 21


<210> 15 
<211> 18
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification - HPV16RC
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 15 ctccccatgt cgtaggta 18


<210> 16 
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> 5-C6-Amino Linker - HPV18
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 16 ttttgcttct acacagtctc ct 22


<210> 17 
<211> 19
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification - HPV18RC
<300>
<301> Nubia Muoz, M.D., F. Xavier Bosch, M.D., Silvia de Sanjos, M.D., Rolando Herrero, M.D., Xavier Castellsagu, M.D., Keerti V. Shah, Ph.D., Peter J.F. Snijders, Ph.D., and Chris J.L.M. Meijer, M.D. for the International Agency for Research on Cancer Multicenter Cervical Cancer Study Group
<302> Epidemiologic Classification of Human Papillomavirus Types Associated with Cervical Cancer
<303> The New England Journal of Medicine
<304> 348
<305> 6
<306> 518-527
<307> 2003 02 06
<308> 10.1056/NEJMoa021641
<400> 17 aggagactgt gtagaagca 19


<210> 18 
<211> 31
<212> DNA
<213> artificial sequence
<220>
<223> 5-6-carboxyfluorescein (FAM) modification - 3-4-((4-(dimethylamino)phenyl)azo)benzoic Acid (DABCYL) modification - DNA beacon - [amc6dt] corresponds to a modified thymine with a spacer; concretelly a thymine-acrylamido-C6-NH2 linker
<300>
<301> S Turner, K M Pryer, V P Miao, J D Palmer 
<302> Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis 
<303> J Eukaryot Microbiol 
<304> 46
<305> 4
<306> 327 - 338
<307> 1999 08 01
<308> 10.1111/j.1550-7408.1999.tb04612.x   
<400> 18 tagaagggtt accttgttac gacttct[amc6dt]ct a 31

<210> 19 
<211> 19
<212> DNA
<213> artificial sequence
<220>
<223> rc-DNA beacon 
<400> 19 aagtcgtaac aaggtaacc 19

<210> 20 
<211> 39
<212> DNA
<213> artificial sequence
<220>
<223> 5-carboxy C10 linker - Pen-COOH
<300>
<301> Juan Zhao, Wenjuan Guo, Meishan Peia  and  Feng Ding
<302> GRFe3O4NPs and PEDOTAuNPs composite based electrochemical aptasensor for the sensitive detection of penicillin
<303> Analytical Methods
<304> 8
<305> 22
<306> 4391 - 4397
<307> 2016 05 10
<308> 10.1039/c6ay00555a
<400> 20 ttttctgaat tggatctctc ttcttgagcg atctccaca 39

