               SEQUENCE LISTING

<110> NATIONAL AND KAPODISTRIAN UNIVERSITY OF ATHENS
      Scorilas Andreas
      Avgeris Margaritis
      Thomaidis Nikolaos
      Voulgaris Nikolaos
      Adamopoulos Panagiotis

<120> DETECTION AND MUTATIONAL ANALYSIS OF AN RNA VIRUS IN AN ENVIRONMENTAL SAMPLE

<130> 340121

<160> 162

<170> BiSSAP 1.3.6

<210> 1
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 1
agauuggucc uauucuggac aaucuacaca acuagguaua gaauuucuua agagagguga     60

uaaaagugua uauuacacua guaauccuac cacauuccac cuagauggug aaguuaucac    120

cuuugacaau cuuaagacac uucuuucuuu gagagaagug aggacuauua agguguuuac    180

aacaguagac aacauuaacc uccacacgca aguuguggac augucaauga cauauggaca    240

acaguuuggu ccaacuuauu uggauggagc ugauguuacu aaaauaaaac cucauaauuc    300


<210> 2
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 2
aacccauuac uuuaugaugc caacuauuuu cuuugcuggc auacuaauug uuacgacuau     60

uguauaccuu acaauagugu aacuucuuca auugucauua cuucagguga uggcacaaca    120

aguccuauuu cugaacauga cuaccagauu ggugguuaua cugaaaaaug ggaaucugga    180

guaaaagacu guguuguauu acacaguuac uucacuucag acuauuacca gcuguacuca    240

acucaauuga guacagacac ugguguugaa cauguuaccu ucuucaucua caauaaaauu    300


<210> 3
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 3
uaccaagagu guguuagagg uacaacagua cuuuuaaaag aaccuugcuc uucuggaaca     60

uacgagggca auucaccauu ucauccucua gcugauaaca aauuugcacu gacuugcuuu    120

agcacucaau uugcuuuugc uuguccugac ggcguaaaac acgucuauca guuacgugcc    180

agaucaguuu caccuaaacu guucaucaga caagaggaag uucaagaacu uuacucucca    240

auuuuucuua uuguugcggc aauaguguuu auaacacuuu gcuucacacu caaaagaaag    300


<210> 4
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 4
ggugguuaua cugaaaaaug ggaaucugga guaaaagacu guguuguauu acacaguuac     60

uucacuucag acuauuacca gcuguacuca acucaauuga guacagacac ugguguugaa    120

cauguuaccu ucuucaucua caauaaaauu guugaugagc cugaagaaca uguccaaauu    180

cacacaaucg acgguucauc cggaguuguu aauccaguaa uggaaccaau uuaugaugaa    240

ccgacgacga cuacuagcgu gccuuuguaa gcacaagcug augaguacga acuuauguac    300


<210> 5
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 5
auauuacgcg uauacgccaa cuuaggugaa cguguacgcc aagcuuuguu aaaaacagua     60

caauucugug augccaugcg aaaugcuggu auuguuggug uacugacauu agauaaucaa    120

gaucucaaug guaacuggua ugauuucggu gauuucauac aaaccacgcc agguagugga    180

guuccuguug uagauucuua uuauucauug uuaaugccua uauuaaccuu gaccagggcu    240

uuaacugcag agucacaugu ugacacugac uuaacaaagc cuuacauuaa gugggauuug    300


<210> 6
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 6
aaugucgaua gauauccugc uaauuccauu guuuguagau uugacacuag agugcuaucu     60

aaccuuaacu ugccugguug ugaugguggc aguuuguaug uaaauaaaca ugcauuccac    120

acaccagcuu uugauaaaag ugcuuuuguu aauuuaaaac aauuaccauu uuucuauuac    180

ucugacaguc caugugaguc ucauggaaaa caaguagugu cagauauaga uuauguacca    240

cuaaagucug cuacguguau aacacguugc aauuuaggug gugcugucug uagacaucau    300


<210> 7
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 7
acagaaugau ugaacuuuca uuaauugacu ucuauuugug cuuuuuagcc uuucugcuau     60

uccuuguuuu aauuaugcuu auuaucuuuu gguucucacu ugaacugcaa gaucauaaug    120

aaacuuguca cgccuaaacg aacaugaaau uucuuguuuu cuuaggaauc aucacaacug    180

uagcugcauu ucaccaagaa uguaguuuac agucauguac ucaacaucaa ccauauguag    240

uugaugaccc guguccuauu cacuucuauu cuaaauggua uauuagagua ggagcuagaa    300


<210> 8
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 8
uuuguaacag uuuacucaca ccuuuugcuc guugcugcug gccuugaagc cccuuuucuc     60

uaucuuuaug cuuuagucua cuucuugcag aguauaaacu uuguaagaau aauaaugagg    120

cuuuggcuuu gcuggaaaug ccguuccaaa aacccauuac uuuaugaugc caacuauuuu    180

cuuugcuggc auacuaauug uuacgacuau uguauaccuu acaauagugu aacuucuuca    240

auugucauua cuucagguga uggcacaaca aguccuauuu cugaacauga cuaccagauu    300


<210> 9
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 9
ucaaacuucu aacuuuagag uccaaccaac agaaucuauu guuagauuuc cuaauauuac     60

aaacuugugc ccuuuuggug aaguuuuuaa cgccaccaga uuugcaucug uuuaugcuug    120

gaacaggaag agaaucagca acuguguugc ugauuauucu guccuauaua auuccgcauc    180

auuuuccacu uuuaaguguu auggaguguc uccuacuaaa uuaaaugauc ucugcuuuac    240

uaaugucuau gcagauucau uuguaauuag aggugaugaa gucagacaaa ucgcuccagg    300


<210> 10
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 10
uguuuaccuu aaacauggag gagguguugc aggagccuua aauaaggcua cuaacaaugc     60

caugcaaguu gaaucugaug auuacauagc uacuaaugga ccacuuaaag ugggugguag    120

uuguguuuua agcggacaca aucuugcuaa acacugucuu cauguugucg gcccaaaugu    180

uaacaaaggu gaagacauuc aacuucuuaa gagugcuuau gaaaauuuua aucagcacga    240

aguucuacuu gcaccauuau uaucagcugg uauuuuuggu gcugacccua uacauucuuu    300


<210> 11
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 11
ugguuuaacu ucuauuaaau gggcagauaa caacuguuau cuugccacug cauuguuaac     60

acuccaacaa auagaguuga aguuuaaucc accugcucua caagaugcuu auuacagagc    120

aagggcuggu gaagcugcua acuuuugugc acuuaucuua gccuacugua auaagacagu    180

aggugaguua ggugauguua gagaaacaau gaguuacuug uuucaacaug ccaauuuaga    240

uucuugcaaa agagucuuga acguggugug uaaaacuugu ggacaacagc agacaacccu    300


<210> 12
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 12
aauuuaaaac aauuaccauu uuucuauuac ucugacaguc caugugaguc ucauggaaaa     60

caaguagugu cagauauaga uuauguacca cuaaagucug cuacguguau aacacguugc    120

aauuuaggug gugcugucug uagacaucau gcuaaugagu acagauugua ucucgaugcu    180

uauaacauga ugaucucagc uggcuuuagc uuguggguuu acaaacaauu ugauacuuau    240

aaccucugga acacuuuuac aagacuucag aguuuagaaa auguggcuuu uaauguugua    300


<210> 13
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 13
ugauuauucu guccuauaua auuccgcauc auuuuccacu uuuaaguguu auggaguguc     60

uccuacuaaa uuaaaugauc ucugcuuuac uaaugucuau gcagauucau uuguaauuag    120

aggugaugaa gucagacaaa ucgcuccagg gcaaacugga aagauugcug auuauaauua    180

uaaauuacca gaugauuuua caggcugcgu uauagcuugg aauucuaaca aucuugauuc    240

uaagguuggu gguaauuaua auuaccugua uagauuguuu aggaagucua aucucaaacc    300


<210> 14
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 14
uaagggugua gaagcuguua uguacauggg cacacuuucu uaugaacaau uuaagaaagg     60

uguucagaua ccuuguacgu gugguaaaca agcuacaaaa uaucuaguac aacaggaguc    120

accuuuuguu augaugucag caccaccugc ucaguaugaa cuuaagcaug guacauuuac    180

uugugcuagu gaguacacug guaauuacca guguggucac uauaaacaua uaacuucuaa    240

agaaacuuug uauugcauag acggugcuuu acuuacaaag uccucagaau acaaaggucc    300


<210> 15
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 15
agucauuuug cuauuggccu agcucucuac uacccuucug cucgcauagu guauacagcu     60

ugcucucaug ccgcuguuga ugcacuaugu gagaaggcau uaaaauauuu gccuauagau    120

aaauguagua gaauuauacc ugcacgugcu cguguagagu guuuugauaa auucaaagug    180

aauucaacau uagaacagua ugucuuuugu acuguaaaug cauugccuga gacgacagca    240

gauauaguug ucuuugauga aauuucaaug gccacaaauu augauuugag uguugucaau    300


<210> 16
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 16
ugugcaacug uacauacagc uaauaaaugg gaucucauua uuagugauau guacgacccu     60

aagacuaaaa auguuacaaa agaaaaugac ucuaaagagg guuuuuucac uuacauuugu    120

ggguuuauac aacaaaagcu agcucuugga gguuccgugg cuauaaagau aacagaacau    180

ucuuggaaug cugaucuuua uaagcucaug ggacacuucg caugguggac agccuuuguu    240

acuaauguga augcgucauc aucugaagca uuuuuaauug gauguaauua ucuuggcaaa    300


<210> 17
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 17
uggugccacu ucugcugcuc uucaaccuga agaagagcaa gaagaagauu gguuagauga     60

ugauagucaa caaacuguug gucaacaaga cggcagugag gacaaucaga caacuacuau    120

ucaaacaauu guugagguuc aaccucaauu agagauggaa cuuacaccag uuguucagac    180

uauugaagug aauaguuuua gugguuauuu aaaacuuacu gacaauguau acauuaaaaa    240

ugcagacauu guggaagaag cuaaaaaggu aaaaccaaca gugguuguua augcagccaa    300


<210> 18
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 18
acacuagugc cacaagagca cuauguuaga auuacuggcu uauacccaac acucaauauc     60

ucagaugagu uuucuagcaa uguugcaaau uaucaaaagg uugguaugca aaaguauucu    120

acacuccagg gaccaccugg uacugguaag agucauuuug cuauuggccu agcucucuac    180

uacccuucug cucgcauagu guauacagcu ugcucucaug ccgcuguuga ugcacuaugu    240

gagaaggcau uaaaauauuu gccuauagau aaauguagua gaauuauacc ugcacgugcu    300


<210> 19
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 19
acuuaucuua gccuacugua auaagacagu aggugaguua ggugauguua gagaaacaau     60

gaguuacuug uuucaacaug ccaauuuaga uucuugcaaa agagucuuga acguggugug    120

uaaaacuugu ggacaacagc agacaacccu uaagggugua gaagcuguua uguacauggg    180

cacacuuucu uaugaacaau uuaagaaagg uguucagaua ccuuguacgu gugguaaaca    240

agcuacaaaa uaucuaguac aacaggaguc accuuuuguu augaugucag caccaccugc    300


<210> 20
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 20
agcaguaggg gaacuucucc ugcuagaaug gcuggcaaug gcggugaugc ugcucuugcu     60

uugcugcugc uugacagauu gaaccagcuu gagagcaaaa ugucugguaa aggccaacaa    120

caacaaggcc aaacugucac uaagaaaucu gcugcugagg cuucuaagaa gccucggcaa    180

aaacguacug ccacuaaagc auacaaugua acacaagcuu ucggcagacg ugguccagaa    240

caaacccaag gaaauuuugg ggaccaggaa cuaaucagac aaggaacuga uuacaaacau    300


<210> 21
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 21
ccugcuaaca augcugcaau cgugcuacaa cuuccucaag gaacaacauu gccaaaaggc     60

uucuacgcag aagggagcag aggcggcagu caagccucuu cucguuccuc aucacguagu    120

cgcaacaguu caagaaauuc aacuccaggc agcaguaggg gaacuucucc ugcuagaaug    180

gcuggcaaug gcggugaugc ugcucuugcu uugcugcugc uugacagauu gaaccagcuu    240

gagagcaaaa ugucugguaa aggccaacaa caacaaggcc aaacugucac uaagaaaucu    300


<210> 22
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 22
augaaagauc ucaguccaag augguauuuc uacuaccuag gaacugggcc agaagcugga     60

cuucccuaug gugcuaacaa agacggcauc auauggguug caacugaggg agccuugaau    120

acaccaaaag aucacauugg cacccgcaau ccugcuaaca augcugcaau cgugcuacaa    180

cuuccucaag gaacaacauu gccaaaaggc uucuacgcag aagggagcag aggcggcagu    240

caagccucuu cucguuccuc aucacguagu cgcaacaguu caagaaauuc aacuccaggc    300


<210> 23
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 23
gcugcugagg cuucuaagaa gccucggcaa aaacguacug ccacuaaagc auacaaugua     60

acacaagcuu ucggcagacg ugguccagaa caaacccaag gaaauuuugg ggaccaggaa    120

cuaaucagac aaggaacuga uuacaaacau uggccgcaaa uugcacaauu ugcccccagc    180

gcuucagcgu ucuucggaau gucgcgcauu ggcauggaag ucacaccuuc gggaacgugg    240

uugaccuaca caggugccau caaauuggau gacaaagauc caaauuucaa agaucaaguc    300


<210> 24
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 24
uggccgcaaa uugcacaauu ugcccccagc gcuucagcgu ucuucggaau gucgcgcauu     60

ggcauggaag ucacaccuuc gggaacgugg uugaccuaca caggugccau caaauuggau    120

gacaaagauc caaauuucaa agaucaaguc auuuugcuga auaagcauau ugacgcauac    180

aaaacauucc caccaacaga gccuaaaaag gacaaaaaga agaaggcuga ugaaacucaa    240

gccuuaccgc agagacagaa gaaacagcaa acugugacuc uucuuccugc ugcagauuug    300


<210> 25
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 25
uucgggaacg ugguugaccu acacaggugc caucaaauug gaugacaaag auccaaauuu     60

caaagaucaa gucauuuugc ugaauaagca uauugacgca uacaaaacau ucccaccaac    120

agagccuaaa aaggacaaaa agaagaaggc ugaugaaacu caagccuuac cgcagagaca    180

gaagaaacag caaacuguga cucuucuucc ugcugcagau uuggaugauu ucuccaaaca    240

auugcaacaa uccaugagca gugcugacuc aacucaggcc uaaacucaug cagaccacac    300


<210> 26
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 26
ugaacucggu acagaaguaa augaguucgc cuguguugug gcagaugcug ucauaaaaac     60

uuugcaacca guaucugaau uacuuacacc acugggcauu gauuuagaug aguggaguau    120

ggcuacauac uacuuauuug augagucugg ugaguuuaaa uuggcuucac auauguauug    180

uucuuucuac ccuccagaug aggaugaaga agaaggugau ugugaagaag aagaguuuga    240

gccaucaacu caauaugagu augguacuga agaugauuac caagguaaac cuuuggaauu    300


<210> 27
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 27
aagaguuugu guagauacug uucgcacaaa ugucuacuua gcugucuuug auaaaaaucu     60

cuaugacaaa cuuguuucaa gcuuuuugga aaugaagagu gaaaagcaag uugaacaaaa    120

gaucgcugag auuccuaaag aggaaguuaa gccauuuaua acugaaagua aaccuucagu    180

ugaacagaga aaacaagaug auaagaaaau caaagcuugu guugaagaag uuacaacaac    240

ucuggaagaa acuaaguucc ucacagaaaa cuuguuacuu uauauugaca uuaauggcaa    300


<210> 28
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 28
ucaguaugaa cuuaagcaug guacauuuac uugugcuagu gaguacacug guaauuacca     60

guguggucac uauaaacaua uaacuucuaa agaaacuuug uauugcauag acggugcuuu    120

acuuacaaag uccucagaau acaaaggucc uauuacggau guuuucuaca aagaaaacag    180

uuacacaaca accauaaaac caguuacuua uaaauuggau gguguuguuu guacagaaau    240

ugacccuaag uuggacaauu auuauaagaa agacaauucu uauuucacag agcaaccaau    300


<210> 29
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 29
gagagaagug aggacuauua agguguuuac aacaguagac aacauuaacc uccacacgca     60

aguuguggac augucaauga cauauggaca acaguuuggu ccaacuuauu uggauggagc    120

ugauguuacu aaaauaaaac cucauaauuc acaugaaggu aaaacauuuu auguuuuacc    180

uaaugaugac acucuacgug uugaggcuuu ugaguacuac cacacaacug auccuaguuu    240

ucuggguagg uacaugucag cauuaaauca cacuaaaaag uggaaauacc cacaaguuaa    300


<210> 30
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 30
ggcuucauuu aauuauuuga agucaccuaa uuuuucuaaa cugauaaaua uuauaauuug     60

guuuuuacua uuaaguguuu gccuagguuc uuuaaucuac ucaaccgcug cuuuaggugu    120

uuuaaugucu aauuuaggca ugccuucuua cuguacuggu uacagagaag gcuauuugaa    180

cucuacuaau gucacuauug caaccuacug uacugguucu auaccuugua guguuugucu    240

uagugguuua gauucuuuag acaccuaucc uucuuuagaa acuauacaaa uuaccauuuc    300


<210> 31
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 31
gguuccgugg cuauaaagau aacagaacau ucuuggaaug cugaucuuua uaagcucaug     60

ggacacuucg caugguggac agccuuuguu acuaauguga augcgucauc aucugaagca    120

uuuuuaauug gauguaauua ucuuggcaaa ccacgcgaac aaauagaugg uuaugucaug    180

caugcaaauu acauauuuug gaggaauaca aauccaauuc aguugucuuc cuauucuuua    240

uuugacauga guaaauuucc ccuuaaauua agggguacug cuguuauguc uuuaaaagaa    300


<210> 32
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 32
ugaguuuaaa uuggcuucac auauguauug uucuuucuac ccuccagaug aggaugaaga     60

agaaggugau ugugaagaag aagaguuuga gccaucaacu caauaugagu augguacuga    120

agaugauuac caagguaaac cuuuggaauu uggugccacu ucugcugcuc uucaaccuga    180

agaagagcaa gaagaagauu gguuagauga ugauagucaa caaacuguug gucaacaaga    240

cggcagugag gacaaucaga caacuacuau ucaaacaauu guugagguuc aaccucaauu    300


<210> 33
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 33
auuaucuaga guauuagguu ugaaaacccu ugcuacucau gguuuagcug cuguuaauag     60

ugucccuugg gauacuauag cuaauuaugc uaagccuuuu cuuaacaaag uuguuaguac    120

aacuacuaac auaguuacac gguguuuaaa ccguguuugu acuaauuaua ugccuuauuu    180

cuuuacuuua uugcuacaau uguguacuuu uacuagaagu acaaauucua gaauuaaagc    240

aucuaugccg acuacuauag caaagaauac uguuaagagu gucgguaaau uuugucuaga    300


<210> 34
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 34
cauacccauu ggugcaggua uaugcgcuag uuaucagacu cagacuaauu cuccucggcg     60

ggcacguagu guagcuaguc aauccaucau ugccuacacu augucacuug gugcagaaaa    120

uucaguugcu uacucuaaua acucuauugc cauacccaca aauuuuacua uuaguguuac    180

cacagaaauu cuaccagugu cuaugaccaa gacaucagua gauuguacaa uguacauuug    240

uggugauuca acugaaugca gcaaucuuuu guugcaauau ggcaguuuuu guacacaauu    300


<210> 35
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 35
aacaggccac aaauaggcgu gguaagagaa uuccuuacac guaacccugc uuggagaaaa     60

gcugucuuua uuucaccuua uaauucacag aaugcuguag ccucaaagau uuugggacua    120

ccaacucaaa cuguugauuc aucacagggc ucagaauaug acuaugucau auucacucaa    180

accacugaaa cagcucacuc uuguaaugua aacagauuua auguugcuau uaccagagca    240

aaaguaggca uacuuugcau aaugucugau agagaccuuu augacaaguu gcaauuuaca    300


<210> 36
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 36
ucagaauaug acuaugucau auucacucaa accacugaaa cagcucacuc uuguaaugua     60

aacagauuua auguugcuau uaccagagca aaaguaggca uacuuugcau aaugucugau    120

agagaccuuu augacaaguu gcaauuuaca agucuugaaa uuccacguag gaauguggca    180

acuuuacaag cugaaaaugu aacaggacuc uuuaaagauu guaguaaggu aaucacuggg    240

uuacauccua cacaggcacc uacacaccuc aguguugaca cuaaauucaa aacugaaggu    300


<210> 37
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 37
ucagcuuaug ugucaaccua uacuguuacu agaucaggca uuagugucug auguugguga     60

uagugcggaa guugcaguua aaauguuuga ugcuuacguu aauacguuuu caucaacuuu    120

uaacguacca auggaaaaac ucaaaacacu aguugcaacu gcagaagcug aacuugcaaa    180

gaaugugucc uuagacaaug ucuuaucuac uuuuauuuca gcagcucggc aaggguuugu    240

ugauucagau guagaaacua aagauguugu ugaaugucuu aaauugucac aucaaucuga    300


<210> 38
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 38
auugaaccag cuugagagca aaaugucugg uaaaggccaa caacaacaag gccaaacugu     60

cacuaagaaa ucugcugcug aggcuucuaa gaagccucgg caaaaacgua cugccacuaa    120

agcauacaau guaacacaag cuuucggcag acguggucca gaacaaaccc aaggaaauuu    180

uggggaccag gaacuaauca gacaaggaac ugauuacaaa cauuggccgc aaauugcaca    240

auuugccccc agcgcuucag cguucuucgg aaugucgcgc auuggcaugg aagucacacc    300


<210> 39
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 39
uuacaaacgu aauagagcaa caagagucga auguacaacu auuguuaaug guguuagaag     60

guccuuuuau gucuaugcua auggagguaa aggcuuuugc aaacuacaca auuggaauug    120

uguuaauugu gauacauucu gugcugguag uacauuuauu agugaugaag uugcgagaga    180

cuugucacua caguuuaaaa gaccaauaaa uccuacugac cagucuucuu acaucguuga    240

uaguguuaca gugaagaaug guuccaucca ucuuuacuuu gauaaagcug gucaaaagac    300


<210> 40
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 40
agagauggaa cuuacaccag uuguucagac uauugaagug aauaguuuua gugguuauuu     60

aaaacuuacu gacaauguau acauuaaaaa ugcagacauu guggaagaag cuaaaaaggu    120

aaaaccaaca gugguuguua augcagccaa uguuuaccuu aaacauggag gagguguugc    180

aggagccuua aauaaggcua cuaacaaugc caugcaaguu gaaucugaug auuacauagc    240

uacuaaugga ccacuuaaag ugggugguag uuguguuuua agcggacaca aucuugcuaa    300


<210> 41
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 41
gcuaacuaac aucuuuggca cuguuuauga aaaacucaaa cccguccuug auuggcuuga     60

agagaaguuu aaggaaggug uagaguuucu uagagacggu ugggaaauug uuaaauuuau    120

cucaaccugu gcuugugaaa uugucggugg acaaauuguc accugugcaa aggaaauuaa    180

ggagaguguu cagacauucu uuaagcuugu aaauaaauuu uuggcuuugu gugcugacuc    240

uaucauuauu gguggagcua aacuuaaagc cuugaauuua ggugaaacau uugucacgca    300


<210> 42
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 42
ugcucgguau augagaucuc ucaaagugcc agcuacaguu ucuguuucuu caccugaugc     60

uguuacagcg uauaaugguu aucuuacuuc uucuucuaaa acaccugaag aacauuuuau    120

ugaaaccauc ucacuugcug guuccuauaa agauuggucc uauucuggac aaucuacaca    180

acuagguaua gaauuucuua agagagguga uaaaagugua uauuacacua guaauccuac    240

cacauuccac cuagauggug aaguuaucac cuuugacaau cuuaagacac uucuuucuuu    300


<210> 43
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 43
auugauuucu uagaauuagc uauggaugaa uucauugaac gguauaaauu agaaggcuau     60

gccuucgaac auaucguuua uggagauuuu agucauaguc aguuaggugg uuuacaucua    120

cugauuggac uagcuaaacg uuuuaaggaa ucaccuuuug aauuagaaga uuuuauuccu    180

auggacagua caguuaaaaa cuauuucaua acagaugcgc aaacagguuc aucuaagugu    240

guguguucug uuauugauuu auuacuugau gauuuuguug aaauaauaaa aucccaagau    300


<210> 44
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 44
uacauuuauu agugaugaag uugcgagaga cuugucacua caguuuaaaa gaccaauaaa     60

uccuacugac cagucuucuu acaucguuga uaguguuaca gugaagaaug guuccaucca    120

ucuuuacuuu gauaaagcug gucaaaagac uuaugaaaga cauucucucu cucauuuugu    180

uaacuuagac aaccugagag cuaauaacac uaaagguuca uugccuauua auguuauagu    240

uuuugauggu aaaucaaaau gugaagaauc aucugcaaaa ucagcgucug uuuacuacag    300


<210> 45
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 45
acagaaggcc gcuauaacaa uacuagaugg aauuucacag uauucacuga gacucauuga     60

ugcuaugaug uucacaucug auuuggcuac uaacaaucua guuguaaugg ccuacauuac    120

aggugguguu guucaguuga cuucgcagug gcuaacuaac aucuuuggca cuguuuauga    180

aaaacucaaa cccguccuug auuggcuuga agagaaguuu aaggaaggug uagaguuucu    240

uagagacggu ugggaaauug uuaaauuuau cucaaccugu gcuugugaaa uugucggugg    300


<210> 46
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 46
cuucacacuc aaaggcggug caccaacaaa gguuacuuuu ggugaugaca cugugauaga     60

agugcaaggu uacaagagug ugaauaucac uuuugaacuu gaugaaagga uugauaaagu    120

acuuaaugag aagugcucug ccuauacagu ugaacucggu acagaaguaa augaguucgc    180

cuguguugug gcagaugcug ucauaaaaac uuugcaacca guaucugaau uacuuacacc    240

acugggcauu gauuuagaug aguggaguau ggcuacauac uacuuauuug augagucugg    300


<210> 47
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 47
auuaaagguu uauaccuucc cagguaacaa accaaccaac uuucgaucuc uuguagaucu     60

guucucuaaa cgaacuuuaa aaucugugug gcugucacuc ggcugcaugc uuagugcacu    120

cacgcaguau aauuaauaac uaauuacugu cguugacagg acacgaguaa cucgucuauc    180

uucugcaggc ugcuuacggu uucguccgug uugcagccga ucaucagcac aucuagguuu    240

cguccgggug ugaccgaaag guaagaugga gagccuuguc ccugguuuca acgagaaaac    300


<210> 48
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 48
aucuuuacca ggaguuuucu gugguguaga ugcuguaaau uuacuuacua auauguuuac     60

accacuaauu caaccuauug gugcuuugga cauaucagca ucuauaguag cuggugguau    120

uguagcuauc guaguaacau gccuugccua cuauuuuaug agguuuagaa gagcuuuugg    180

ugaauacagu cauguaguug ccuuuaauac uuuacuauuc cuuaugucau ucacuguacu    240

cuguuuaaca ccaguuuacu cauucuuacc ugguguuuau ucuguuauuu acuuguacuu    300


<210> 49
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 49
uucuuguuuu cuuaggaauc aucacaacug uagcugcauu ucaccaagaa uguaguuuac     60

agucauguac ucaacaucaa ccauauguag uugaugaccc guguccuauu cacuucuauu    120

cuaaauggua uauuagagua ggagcuagaa aaucagcacc uuuaauugaa uugugcgugg    180

augaggcugg uucuaaauca cccauucagu acaucgauau cgguaauuau acaguuuccu    240

guuuaccuuu uacaauuaau ugccaggaac cuaaauuggg uagucuugua gugcguuguu    300


<210> 50
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 50
gcaaacugga aagauugcug auuauaauua uaaauuacca gaugauuuua caggcugcgu     60

uauagcuugg aauucuaaca aucuugauuc uaagguuggu gguaauuaua auuaccugua    120

uagauuguuu aggaagucua aucucaaacc uuuugagaga gauauuucaa cugaaaucua    180

ucaggccggu agcacaccuu guaauggugu ugaagguuuu aauuguuacu uuccuuuaca    240

aucauauggu uuccaaccca cuaauggugu ugguuaccaa ccauacagag uaguaguacu    300


<210> 51
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 51
auuugacacc uucaaugggg aauguccaaa uuuuguauuu cccuuaaauu ccauaaucaa     60

gacuauucaa ccaaggguug aaaagaaaaa gcuugauggc uuuaugggua gaauucgauc    120

ugucuaucca guugcgucac caaaugaaug caaccaaaug ugccuuucaa cucucaugaa    180

gugugaucau uguggugaaa cuucauggca gacgggcgau uuuguuaaag ccacuugcga    240

auuuuguggc acugagaauu ugacuaaaga aggugccacu acuugugguu acuuacccca    300


<210> 52
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 52
acguggucca gaacaaaccc aaggaaauuu uggggaccag gaacuaauca gacaaggaac     60

ugauuacaaa cauuggccgc aaauugcaca auuugccccc agcgcuucag cguucuucgg    120

aaugucgcgc auuggcaugg aagucacacc uucgggaacg ugguugaccu acacaggugc    180

caucaaauug gaugacaaag auccaaauuu caaagaucaa gucauuuugc ugaauaagca    240

uauugacgca uacaaaacau ucccaccaac agagccuaaa aaggacaaaa agaagaaggc    300


<210> 53
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 53
ugaugaaacu caagccuuac cgcagagaca gaagaaacag caaacuguga cucuucuucc     60

ugcugcagau uuggaugauu ucuccaaaca auugcaacaa uccaugagca gugcugacuc    120

aacucaggcc uaaacucaug cagaccacac aaggcagaug ggcuauauaa acguuuucgc    180

uuuuccguuu acgauauaua gucuacucuu gugcagaaug aauucucgua acuacauagc    240

acaaguagau guaguuaacu uuaaucucac auagcaaucu uuaaucagug uguaacauua    300


<210> 54
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 54
ugagaagcaa gaaauucuug gaacuguuuc uuggaauuug cgagaaaugc uugcacaugc     60

agaagaaaca cgcaaauuaa ugccugucug uguggaaacu aaagccauag uuucaacuau    120

acagcguaaa uauaagggua uuaaaauaca agagggugug guugauuaug gugcuagauu    180

uuacuuuuac accaguaaaa caacuguagc gucacuuauc aacacacuua acgaucuaaa    240

ugaaacucuu guuacaaugc cacuuggcua uguaacacau ggcuuaaauu uggaagaagc    300


<210> 55
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 55
accucuuaca acagcagcca aacuaauggu ugucauacca gacuauaaca cauauaaaaa     60

uacgugugau gguacaacau uuacuuaugc aucagcauug ugggaaaucc aacagguugu    120

agaugcagau aguaaaauug uucaacuuag ugaaauuagu auggacaauu caccuaauuu    180

agcauggccu cuuauuguaa cagcuuuaag ggccaauucu gcugucaaau uacagaauaa    240

ugagcuuagu ccuguugcac uacgacagau gucuugugcu gccgguacua cacaaacugc    300


<210> 56
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 56
aaccucauaa uuaaaaauuu aucuaaguca cuaacugaga auaaauauuc ucaauuagau     60

gaagagcaac caauggagau ugauuaaacg aacaugaaaa uuauucuuuu cuuggcacug    120

auaacacucg cuacuuguga gcuuuaucac uaccaagagu guguuagagg uacaacagua    180

cuuuuaaaag aaccuugcuc uucuggaaca uacgagggca auucaccauu ucauccucua    240

gcugauaaca aauuugcacu gacuugcuuu agcacucaau uugcuuuugc uuguccugac    300


<210> 57
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 57
cagaggcggc agucaagccu cuucucguuc cucaucacgu agucgcaaca guucaagaaa     60

uucaacucca ggcagcagua ggggaacuuc uccugcuaga auggcuggca auggcgguga    120

ugcugcucuu gcuuugcugc ugcuugacag auugaaccag cuugagagca aaaugucugg    180

uaaaggccaa caacaacaag gccaaacugu cacuaagaaa ucugcugcug aggcuucuaa    240

gaagccucgg caaaaacgua cugccacuaa agcauacaau guaacacaag cuuucggcag    300


<210> 58
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 58
auuccaguag cagugacaau auugcuuugc uuguacagua agugacaaca gauguuucau     60

cucguugacu uucagguuac uauagcagag auauuacuaa uuauuaugag gacuuuuaaa    120

guuuccauuu ggaaucuuga uuacaucaua aaccucauaa uuaaaaauuu aucuaaguca    180

cuaacugaga auaaauauuc ucaauuagau gaagagcaac caauggagau ugauuaaacg    240

aacaugaaaa uuauucuuuu cuuggcacug auaacacucg cuacuuguga gcuuuaucac    300


<210> 59
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 59
gccagauuac gugcuaagca cuauguguac auuggcgacc cugcucaauu accugcacca     60

cgcacauugc uaacuaaggg cacacuagaa ccagaauauu ucaauucagu guguagacuu    120

augaaaacua uagguccaga cauguuccuc ggaacuuguc ggcguugucc ugcugaaauu    180

guugacacug ugagugcuuu gguuuaugau aauaagcuua aagcacauaa agacaaauca    240

gcucaaugcu uuaaaauguu uuauaagggu guuaucacgc augauguuuc aucugcaauu    300


<210> 60
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 60
uuuugagaga gauauuucaa cugaaaucua ucaggccggu agcacaccuu guaauggugu     60

ugaagguuuu aauuguuacu uuccuuuaca aucauauggu uuccaaccca cuaauggugu    120

ugguuaccaa ccauacagag uaguaguacu uucuuuugaa cuucuacaug caccagcaac    180

uguuugugga ccuaaaaagu cuacuaauuu gguuaaaaac aaauguguca auuucaacuu    240

caaugguuua acaggcacag guguucuuac ugagucuaac aaaaaguuuc ugccuuucca    300


<210> 61
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 61
ucauucguuu cggaagagac agguacguua auaguuaaua gcguacuucu uuuucuugcu     60

uucgugguau ucuugcuagu uacacuagcc auccuuacug cgcuucgauu gugugcguac    120

ugcugcaaua uuguuaacgu gagucuugua aaaccuucuu uuuacguuua cucucguguu    180

aaaaaucuga auucuucuag aguuccugau cuucuggucu aaacgaacua aauauuauau    240

uaguuuuucu guuuggaacu uuaauuuuag ccauggcaga uuccaacggu acuauuaccg    300


<210> 62
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 62
guugaugagc cugaagaaca uguccaaauu cacacaaucg acgguucauc cggaguuguu     60

aauccaguaa uggaaccaau uuaugaugaa ccgacgacga cuacuagcgu gccuuuguaa    120

gcacaagcug augaguacga acuuauguac ucauucguuu cggaagagac agguacguua    180

auaguuaaua gcguacuucu uuuucuugcu uucgugguau ucuugcuagu uacacuagcc    240

auccuuacug cgcuucgauu gugugcguac ugcugcaaua uuguuaacgu gagucuugua    300


<210> 63
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 63
acaaauuguc accugugcaa aggaaauuaa ggagaguguu cagacauucu uuaagcuugu     60

aaauaaauuu uuggcuuugu gugcugacuc uaucauuauu gguggagcua aacuuaaagc    120

cuugaauuua ggugaaacau uugucacgca cucaaaggga uuguacagaa aguguguuaa    180

auccagagaa gaaacuggcc uacucaugcc ucuaaaagcc ccaaaagaaa uuaucuucuu    240

agagggagaa acacuuccca cagaaguguu aacagaggaa guugucuuga aaacugguga    300


<210> 64
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 64
augguacauu uggcuagguu uuauagcugg cuugauugcc auaguaaugg ugacaauuau     60

gcuuugcugu augaccaguu gcuguaguug ucucaagggc uguuguucuu guggauccug    120

cugcaaauuu gaugaagacg acucugagcc agugcucaaa ggagucaaau uacauuacac    180

auaaacgaac uuauggauuu guuuaugaga aucuucacaa uuggaacugu aacuuugaag    240

caaggugaaa ucaaggaugc uacuccuuca gauuuuguuc gcgcuacugc aacgauaccg    300


<210> 65
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 65
augagaguua uacauuuugg ugcugguucu gauaaaggag uugcaccagg uacagcuguu     60

uuaagacagu gguugccuac ggguacgcug cuugucgauu cagaucuuaa ugacuuuguc    120

ucugaugcag auucaacuuu gauuggugau ugugcaacug uacauacagc uaauaaaugg    180

gaucucauua uuagugauau guacgacccu aagacuaaaa auguuacaaa agaaaaugac    240

ucuaaagagg guuuuuucac uuacauuugu ggguuuauac aacaaaagcu agcucuugga    300


<210> 66
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 66
uuaugaaaga cauucucucu cucauuuugu uaacuuagac aaccugagag cuaauaacac     60

uaaagguuca uugccuauua auguuauagu uuuugauggu aaaucaaaau gugaagaauc    120

aucugcaaaa ucagcgucug uuuacuacag ucagcuuaug ugucaaccua uacuguuacu    180

agaucaggca uuagugucug auguugguga uagugcggaa guugcaguua aaauguuuga    240

ugcuuacguu aauacguuuu caucaacuuu uaacguacca auggaaaaac ucaaaacacu    300


<210> 67
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 67
aaaccuucuu uuuacguuua cucucguguu aaaaaucuga auucuucuag aguuccugau     60

cuucuggucu aaacgaacua aauauuauau uaguuuuucu guuuggaacu uuaauuuuag    120

ccauggcaga uuccaacggu acuauuaccg uugaagagcu uaaaaagcuc cuugaacaau    180

ggaaccuagu aauagguuuc cuauuccuua cauggauuug ucuucuacaa uuugccuaug    240

ccaacaggaa uagguuuuug uauauaauua aguuaauuuu ccucuggcug uuauggccag    300


<210> 68
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 68
uagagcugca gaaaucagag cuucugcuaa ucuugcugcu acuaaaaugu cagagugugu     60

acuuggacaa ucaaaaagag uugauuuuug uggaaagggc uaucaucuua uguccuuccc    120

ucagucagca ccucauggug uagucuucuu gcaugugacu uaugucccug cacaagaaaa    180

gaacuucaca acugcuccug ccauuuguca ugauggaaaa gcacacuuuc cucgugaagg    240

ugucuuuguu ucaaauggca cacacugguu uguaacacaa aggaauuuuu augaaccaca    300


<210> 69
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 69
cauacccaca aauuuuacua uuaguguuac cacagaaauu cuaccagugu cuaugaccaa     60

gacaucagua gauuguacaa uguacauuug uggugauuca acugaaugca gcaaucuuuu    120

guugcaauau ggcaguuuuu guacacaauu aaaccgugcu uuaacuggaa uagcuguuga    180

acaagacaaa aacacccaag aaguuuuugc acaagucaaa caaauuuaca aaacaccacc    240

aauuaaagau uuuggugguu uuaauuuuuc acaaauauua ccagauccau caaaaccaag    300


<210> 70
<211> 300
<212> RNA
<213> SARS coronavirus


<400> 70
acaugaaggu aaaacauuuu auguuuuacc uaaugaugac acucuacgug uugaggcuuu     60

ugaguacuac cacacaacug auccuaguuu ucuggguagg uacaugucag cauuaaauca    120

cacuaaaaag uggaaauacc cacaaguuaa ugguuuaacu ucuauuaaau gggcagauaa    180

caacuguuau cuugccacug cauuguuaac acuccaacaa auagaguuga aguuuaaucc    240

accugcucua caagaugcuu auuacagagc aagggcuggu gaagcugcua acuuuugugc    300


<210> 71
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 71
tggacttccc tatggtgcta aca                                            23


<210> 72
<211> 21
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 72
cagcaaagca agagcagcat c                                              21


<210> 73
<211> 22
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 73
gctgcaatcg tgctacaact tc                                             22


<210> 74
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 74
tttcttgaac tgttgcgact acg                                            23


<210> 75
<211> 28
<212> DNA
<213> Artificial Sequence


<220> 
<223> qPCR probe

<400> 75
aacattgcca aaaggcttct acgcagaa                                       28


<210> 76
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 76
cagatgagtt ttctagcaat gttgc                                          25


<210> 77
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 77
tatatctgct gtcgtctcag gca                                            23


<210> 78
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 78
agctctctac tacccttctg ctcg                                           24


<210> 79
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 79
ttaatgcctt ctcacatagt gcatc                                          25


<210> 80
<211> 29
<212> DNA
<213> Artificial Sequence


<220> 
<223> qPCR probe

<400> 80
tatacagctt gctctcatgc cgctgttga                                      29


<210> 81
<211> 21
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 81
agggctggtg aagctgctaa c                                              21


<210> 82
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 82
caggtggtgc tgacatcata aca                                            23


<210> 83
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 83
tgagttactt gtttcaacat gcca                                           24


<210> 84
<211> 22
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal rerverse primer

<400> 84
agggttgtct gctgttgtcc ac                                             22


<210> 85
<211> 31
<212> DNA
<213> Artificial Sequence


<220> 
<223> qPCR probe

<400> 85
ttcttgcaaa agagtcttga acgtggtgtg t                                   31


<210> 86
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 86
tgaacatgac taccagattg gtgg                                           24


<210> 87
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 87
acatgttctt caggctcatc aaca                                           24


<210> 88
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 88
gggaatctgg agtaaaagac tgtgt                                          25


<210> 89
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 89
tgttcaacac cagtgtctgt actca                                          25


<210> 90
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> qPCR probe

<400> 90
tcacttcaga ctattaccag ctg                                            23


<210> 91
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 91
ccacagacac ttgagattct tgaca                                          25


<210> 92
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 92
caccaatggg tatgtcacac tca                                            23


<210> 93
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 93
tgttcttttg gtggtgtcag tgtt                                           24


<210> 94
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 94
aacctgtaga ataaacacgc caagt                                          25


<210> 95
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 95
caaggtgaaa tcaaggatgc tactc                                          25


<210> 96
<211> 22
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 96
gcaacgagca aaaggtgtga gt                                             22


<210> 97
<211> 21
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 97
cactcccttt cggatggctt a                                              21


<210> 98
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 98
aacaaagtga acacccttgg aga                                            23


<210> 99
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 99
tgttaactgt ttggatgaca gatgc                                          25


<210> 100
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 100
gctctctgaa gtggtatcca gttga                                          25


<210> 101
<211> 22
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 101
tgcattctgc attgtgcaaa ct                                             22


<210> 102
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 102
agttgaaact acaaatggaa cacca                                          25


<210> 103
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 103
caacattgcc aaaaggcttc tac                                            23


<210> 104
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 104
gcctttacca gacattttgc tctc                                           24


<210> 105
<211> 22
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 105
cagtcaagcc tcttctcgtt cc                                             22


<210> 106
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 106
gctctcaagc tggttcaatc tgt                                            23


<210> 107
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 107
gctgttatgt ctttaaaaga aggtcaa                                        27


<210> 108
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 108
ggactgggtc ttcgaatcta aagta                                          25


<210> 109
<211> 29
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 109
cagagttgtt atttctagtg atgttcttg                                      29


<210> 110
<211> 28
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 110
aatccagcct cttattatgt tagacttc                                       28


<210> 111
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 111
ggaccaatgg tactaagagg tttga                                          25


<210> 112
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 112
cactaaatta ataggcgtgt gcttaga                                        27


<210> 113
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 113
ctgtcctacc atttaatgat ggtgtt                                         26


<210> 114
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 114
ccatcaatat tcttaaacac aaattcc                                        27


<210> 115
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 115
gcgaataatt gcacttttga atatg                                          25


<210> 116
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 116
gatttcaacg tacactttgt ttctgag                                        27


<210> 117
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 117
tcttatggac cttgaaggaa aacag                                          25


<210> 118
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 118
gcacagtcta cagcatctgt aatggt                                         26


<210> 119
<211> 20
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 119
tcaggttgga cagctggtgc                                                20


<210> 120
<211> 28
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 120
ctgcatagac attagtaaag cagagatc                                       28


<210> 121
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 121
gggttatctt caacctagga cttttc                                         26


<210> 122
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 122
ggagacactc cataacactt aaaagtg                                        27


<210> 123
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 123
agatttgcat ctgtttatgc ttgg                                           24


<210> 124
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 124
aagtaacaat taaaaccttc aacacca                                        27


<210> 125
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 125
aactgtgttg ctgattattc tgtcct                                         26


<210> 126
<211> 28
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 126
gcctgataga tttcagttga aatatctc                                       28


<210> 127
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 127
caatcttgat tctaaggttg gtggt                                          25


<210> 128
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 128
tgtcaagaat ctcaagtgtc tgtgg                                          25


<210> 129
<211> 28
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 129
ttgtttagga agtctaatct caaacctt                                       28


<210> 130
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 130
tagtgtcagc aatgtctctg cca                                            23


<210> 131
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 131
aatttcaact tcaatggttt aacagg                                         26


<210> 132
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 132
ccgaggagaa ttagtctgag tctga                                          25


<210> 133
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 133
actgagtcta acaaaaagtt tctgcc                                         26


<210> 134
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 134
gcaccaatgg gtatgtcaca ctc                                            23


<210> 135
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 135
tggcgtgttt attctacagg ttcta                                          25


<210> 136
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 136
ggtgtttttg tcttgttcaa cagc                                           24


<210> 137
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 137
aataggggct gaacatgtca aca                                            23


<210> 138
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 138
cggtttaatt gtgtacaaaa actgc                                          25


<210> 139
<211> 27
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 139
ccagtgtcta tgaccaagac atcagta                                        27


<210> 140
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 140
cagaagtgta ttgagcaatc atttca                                         26


<210> 141
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 141
actgaatgca gcaatctttt gttg                                           24


<210> 142
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 142
agcaaaggtg gcaaaacagt aag                                            23


<210> 143
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 143
ctggcttcat caaacaatat ggtg                                           24


<210> 144
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 144
attgcaccaa aattggagct aag                                            23


<210> 145
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 145
ttgctgctag agacctcatt tgtg                                           24


<210> 146
<211> 21
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 146
gcttgtgcat tttggttgac c                                              21


<210> 147
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 147
gattgccaac caatttaata gtgct                                          25


<210> 148
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 148
agtcacatgc aagaagacta cacca                                          25


<210> 149
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 149
aagactcact ttcttccaca gcaag                                          25


<210> 150
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 150
ggacataaga tgatagccct ttcc                                           24


<210> 151
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 151
ttaattagag ctgcagaaat cagagc                                         26


<210> 152
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 152
tccttgaatg agtctaattc aggttg                                         26


<210> 153
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 153
tgtcagagtg tgtacttgga caatca                                         26


<210> 154
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 154
caaaggatca taaactgtgt tgttga                                         26


<210> 155
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 155
cacaaaggaa tttttatgaa ccaca                                          25


<210> 156
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 156
agcaggatcc acaagaacaa cag                                            23


<210> 157
<211> 26
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 157
atttgtgtct ggtaactgtg atgttg                                         26


<210> 158
<211> 25
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 158
caactggtca tacagcaaag cataa                                          25


<210> 159
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> External forward primer

<400> 159
ttggctaggt tttatagctg gctt                                           24


<210> 160
<211> 23
<212> DNA
<213> Artificial Sequence


<220> 
<223> External reverse primer

<400> 160
ttgagggtta tgattttgga agc                                            23


<210> 161
<211> 24
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal forward primer

<400> 161
gcttgattgc catagtaatg gtga                                           24


<210> 162
<211> 22
<212> DNA
<213> Artificial Sequence


<220> 
<223> Internal reverse primer

<400> 162
caacaataag ccatccgaaa gg                                             22


